Gvermi12393.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male
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Overview
Homology
BLAST of Gvermi12393.t1 vs. uniprot
Match: A0A2V3J3X6_9FLOR (Chlorophyll a-b binding protein 1B-21, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3X6_9FLOR) HSP 1 Score: 348 bits (893), Expect = 1.600e-120 Identity = 163/182 (89.56%), Postives = 176/182 (96.70%), Query Frame = 0
Query: 35 MAEKSPAVPFMDAPPALTPDMPGYVGFDPFNISAYLNVKWLQEAEIKHARICLLAILGFIVSELYQFPWYTDYPHLVIYRHNWAVTNGSLYQILLWCSFFEIMTLPAVTQMVTGKSDRAPGDFKFDPLGLAKDPAKMAVYKVNEIKNGRLAMIAVSGAIHHAAITNQNLVEQLTSGNILPKL 216
MAEKSP+VPFMDAP LTPDM GYVGFDPFNISA+LNVKWLQEAEIKHARICLLAILGF+V+E+YQFPWY+DYPH+VIYRHNWAVTNGSL QILLWCSFFEIMT+PAVTQMVTG+SDR PGDFKFDPLGL KDPAK+AVYKVNEIKNGRLAMIAVSGAIHHAA+TNQNL+EQLT+GNILPKL
Sbjct: 1 MAEKSPSVPFMDAPSRLTPDMAGYVGFDPFNISAFLNVKWLQEAEIKHARICLLAILGFMVAEVYQFPWYSDYPHVVIYRHNWAVTNGSLSQILLWCSFFEIMTMPAVTQMVTGRSDREPGDFKFDPLGLGKDPAKLAVYKVNEIKNGRLAMIAVSGAIHHAAVTNQNLIEQLTAGNILPKL 182
BLAST of Gvermi12393.t1 vs. uniprot
Match: R7QQW5_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QQW5_CHOCR) HSP 1 Score: 297 bits (760), Expect = 9.770e-100 Identity = 147/214 (68.69%), Postives = 166/214 (77.57%), Query Frame = 0
Query: 1 MAFVTSFVPAFAGARAAFSARVCTLSRRGVAGVVMAEKSPAVPFMDAPPALTPDMPGYVGFDPFNISAYLNVKWLQEAEIKHARICLLAILGFIVSELYQFPWYTDYPHLVIYRHNWAVTNGSLYQILLWCSFFEIMTLPAVTQMVTGKSDRAPGDFKFDPLGLAKDPAKMAVYKVNEIKNGRLAMIAVSGAIHHAAITNQNLVEQLTSGNILP 214
MAFV SF A A+V VA V M KSP+VPFMD P L+PDMPGYVGFDP NIS YLNVK+LQEAEIKH R+CLLAILG IV+E+YQFPWY +YPHLVI RHNW VTNGS+ Q+L+W SF+EIMT PA QMV G+SDR PG F FDPLGL K+P K+A YKVNEIKNGRLAMIAVSGAIHHAAI+ QN+ EQ+TSG +LP
Sbjct: 2 MAFVGSFTAPALSRNAFAGAKVSAAPSHVVARVSMQTKSPSVPFMDVPANLSPDMPGYVGFDPLNISDYLNVKFLQEAEIKHCRVCLLAILGMIVAEVYQFPWYKEYPHLVIDRHNWGVTNGSMLQLLIWISFWEIMTTPATIQMVNGQSDREPGYFGFDPLGLGKNPDKLATYKVNEIKNGRLAMIAVSGAIHHAAISQQNMFEQITSGGLLP 215
BLAST of Gvermi12393.t1 vs. uniprot
Match: A0A5J4YYC4_PORPP (Chlorophyll a-b binding protein, chloroplastic n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YYC4_PORPP) HSP 1 Score: 211 bits (538), Expect = 4.740e-66 Identity = 111/211 (52.61%), Postives = 145/211 (68.72%), Query Frame = 0
Query: 6 SFVPAFAGARAAFS-ARVCTLSRRGVAGVVMAEKSPAVPFMDAPPALTPDMPGYVGFDPFNISAYLNVKWLQEAEIKHARICLLAILGFIVSELYQFPWYTDYPHLVIYRHNW-AVTNGSLYQILLWCSFFEIMTLPAVTQMVTGKSDRAPGDFKFDPLGLAKDPAKMAVYKVNEIKNGRLAMIAVSGAIHHAAITNQNLVEQLTSGNILP 214
+FV ARA+ A VCT + + V M KS +VPFMDAPPAL + G VGFDP NIS +LN+KWL+E+E+KH RIC+LA LG IV E+Y+FP+Y P + H++ A NG L Q+L++ SFFEIMT PAV QM+TG+SDRAPG F FDPLGL K+P ++V+E+KNGRLAMIAV G +H +T ++ QL +G +P
Sbjct: 8 AFVSGVGLARASVGRAAVCTKNVQ----VSMMAKSKSVPFMDAPPALDGSLAGDVGFDPLNISGFLNIKWLRESELKHGRICMLAALGMIVQEVYRFPFYQGAPAVATEAHDYFAKWNGPLGQVLIFASFFEIMTTPAVIQMITGESDRAPGYFAFDPLGLGKNPDARKRFEVSELKNGRLAMIAVGGMVHQMWLTKMGIIGQLQAGKFMP 214
BLAST of Gvermi12393.t1 vs. uniprot
Match: A0A7S0ZC59_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZC59_9RHOD) HSP 1 Score: 202 bits (515), Expect = 3.410e-63 Identity = 98/168 (58.33%), Postives = 123/168 (73.21%), Query Frame = 0
Query: 48 PPALTPDMPGYVGFDPFNISAYLNVKWLQEAEIKHARICLLAILGFIVSELYQFPWYTDYPHLVIYRHNW-AVTNGSLYQILLWCSFFEIMTLPAVTQMVTGKSDRAPGDFKFDPLGLAKDPAKMAVYKVNEIKNGRLAMIAVSGAIHHAAITNQNLVEQLTSGNILP 214
P AL M G VGFDP IS +LN+KWL+EAE+KH RIC+LA LG++V E+Y FP+Y PH+ H++ A NG L QILL+ SFFEIMT PA+ QMVTG+SDR PGDFKFDPL LAK+ M +++NE+KNGRLAMIA+ G +H A +TN +EQL SG +P
Sbjct: 2 PSALDGSMAGDVGFDPLGISDFLNIKWLREAELKHGRICMLAALGWLVQEIYTFPFYPGAPHVPTAAHDYFAKWNGPLGQILLFTSFFEIMTTPAIIQMVTGESDRMPGDFKFDPLKLAKNEETMKKFQLNEVKNGRLAMIAIGGLVHQAWLTNMGAIEQLQSGKFIP 169
BLAST of Gvermi12393.t1 vs. uniprot
Match: A0A1X6P6J5_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P6J5_PORUM) HSP 1 Score: 203 bits (516), Expect = 1.020e-62 Identity = 111/217 (51.15%), Postives = 136/217 (62.67%), Query Frame = 0
Query: 1 MAFVTSFVPAFAGA-RAAFSARVCTLSRRGVAGVVMAEKSPAVPFMDAPPALT--PDMPGYVGFDPFNISAYLNVKWLQEAEIKHARICLLAILGFIVSELYQFPWYTDYPHLVIYRHNWAVTNGSLYQILLWCSFFEIMTLPAVTQMVTGKSDRAPGDFKFDPLGLAKDPAKMAVYKVNEIKNGRLAMIAVSGAIHHAAITNQNLVEQLTSGNILP 214
MAFV++FVPA + R ARV T + V S +VPFM+ PP L P MPG V FDP NISAYL +KWLQEAEIKH R+C+LA LG +V E + FP+Y + PHL H++ V G + IL+ +E +T PAV QM+ G DR PG F FDPL L K+PA + VNE+KNGRLAMI + G IH +TNQ VEQL GN LP
Sbjct: 1 MAFVSTFVPAVSAVLRRGAPARVSTRAVARSVSTVTMRASKSVPFMEVPPVLAENPSMPGNVEFDPLNISAYLPIKWLQEAEIKHGRVCMLACLGLLVQEFFTFPFYKNAPHLATSGHDYGVKVGGMVHILMAVVIWEALTTPAVVQMING-GDRKPGYFGFDPLNLGKNPA----FAVNEVKNGRLAMIGIGGMIHQQWMTNQGSVEQLLKGNFLP 212
BLAST of Gvermi12393.t1 vs. uniprot
Match: Q7XY91_GRIJA (Light-harvest protein (Fragment) n=2 Tax=Griffithsia japonica TaxID=83288 RepID=Q7XY91_GRIJA) HSP 1 Score: 199 bits (505), Expect = 2.280e-62 Identity = 91/119 (76.47%), Postives = 104/119 (87.39%), Query Frame = 0
Query: 97 ELYQFPWYTDYPHLVIYRHNWAVTNGSLYQILLWCSFFEIMTLPAVTQMVTGKSDRAPGDFKFDPLGLAKDPAKMAVYKVNEIKNGRLAMIAVSGAIHHAAITNQNLVEQLTSGNILPK 215
ELY FP+Y+ PHL I RH+W V NGS+ QILLWCSFFEIMT+PA+ QM+ G+ DR PGDF FDPLGL KDPAK+AV+KVNE+KNGRLAM AVSGAIHHAAITNQNLVEQLTSGN++PK
Sbjct: 1 ELYTFPFYSGAPHLAINRHDWGVENGSMKQILLWCSFFEIMTMPALVQMLNGQGDRVPGDFCFDPLGLGKDPAKLAVFKVNEVKNGRLAMCAVSGAIHHAAITNQNLVEQLTSGNVIPK 119
BLAST of Gvermi12393.t1 vs. uniprot
Match: UPI001CA46561 (chlorophyll a/b-binding protein n=1 Tax=Escherichia coli TaxID=562 RepID=UPI001CA46561) HSP 1 Score: 198 bits (504), Expect = 1.420e-60 Identity = 113/221 (51.13%), Postives = 139/221 (62.90%), Query Frame = 0
Query: 1 MAFVTSFVPAFA-----GARAAFSARVCTLSRRGVAGVVMAEKSPAVPFMDAPPALT--PDMPGYVGFDPFNISAYLNVKWLQEAEIKHARICLLAILGFIVSELYQFPWYTDYPHLVIYRHNWAVTNGSLYQILLWCSFFEIMTLPAVTQMVTGKSDRAPGDFKFDPLGLAKDPAKMAVYKVNEIKNGRLAMIAVSGAIHHAAITNQNLVEQLTSGNILP 214
MAFV +FVP+ A GA A +AR S A V S +VPFM+ PPAL P+MPG V FDP NIS+YL +KW+QEAEIKH RIC+LA LG +V E + FP+Y + PHL H++ V G + IL+ FE +T PAV QM+ G DR PG F FDPL L K+P+ + VNEIKNGRLAMI + G IH +TNQ +EQL GN LP
Sbjct: 25 MAFVGTFVPSPAAVLSRGATARVAARPVARS----ATTVTMRASKSVPFMEVPPALAANPNMPGNVEFDPLNISSYLPIKWMQEAEIKHGRICMLACLGLLVQEFFTFPFYKNAPHLATAGHDYGVKVGGMVHILIGVIIFEALTTPAVIQMING-GDREPGYFGFDPLKLGKNPS----FAVNEIKNGRLAMIGIGGMIHQQWMTNQGSIEQLFKGNFLP 236
BLAST of Gvermi12393.t1 vs. uniprot
Match: A0A7S2ZRW4_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZRW4_9RHOD) HSP 1 Score: 196 bits (498), Expect = 5.800e-60 Identity = 106/215 (49.30%), Postives = 135/215 (62.79%), Query Frame = 0
Query: 2 AFVTSFVPAFAGARAAFSARVCTLSRRGVAGVVMAEKSPAVPFMDAPPALTPDMPGYVGFDPFNISAYLNVKWLQEAEIKHARICLLAILGFIVSELYQFPWYTDYPHLVIYRHNWAVTNGSLYQILLWCSFFEIMTLPAVTQMVTGKSDRAPGDFKFDPLGLAK--DPAKMAVYKVNEIKNGRLAMIAVSGAIHHAAITNQNLVEQLTSGNILP 214
AFV SF P+ AR+ R A V M KS +VPFMD P AL M G VGFDP N SAYL + WL+EAEIKH R+C+LA LG++ +E Y FP+Y + P L H++ T +L Q+LL+ +EI+T PAV QMVTGKSDR PG F FDPL L DPAK Y+++E+KNGRLAMIA+ G +H A +T + Q+ +G P
Sbjct: 3 AFVGSFAPSRLTRTTFAGARLSGAPVRSAARVTMQAKSKSVPFMDCPKALDGSMVGDVGFDPLNFSAYLPLSWLREAEIKHCRLCMLAALGWLTTEFYTFPFYANAPKLPTDAHDYF-TRTALAQVLLFVCVWEILTTPAVIQMVTGKSDRKPGYFGFDPLNLTSKWDPAKFEKYQLSELKNGRLAMIAIGGLVHQAWLTKMPAIAQIQAGKFFP 216
BLAST of Gvermi12393.t1 vs. uniprot
Match: A0A5J4YN76_PORPP (Chlorophyll a-b binding protein 1B-21, chloroplastic n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YN76_PORPP) HSP 1 Score: 196 bits (498), Expect = 6.170e-60 Identity = 107/213 (50.23%), Postives = 144/213 (67.61%), Query Frame = 0
Query: 4 VTSFVPAFAGARAAFS-ARVCTLSRRGVAGVVMAEKSPAVPFMDAPPALTPDMPGYVGFDPFNISAYLNVKWLQEAEIKHARICLLAILGFIVSELYQFPWYTDYPHLVIYRHNWAVTNGSLYQILLWCSFFEIMT-LPAVTQMVTGKSDRAPGDFKFDPLGLAKDPAKMAVYKVNEIKNGRLAMIAVSGAIHHAAITNQNLVEQLTSGNILP 214
+ +FV + ARA+ VCT + G A + M KS +VPFM+AP AL M G VGFDP S Y+++K+L+EAE+KH RIC+LA LG IV E+YQFP+Y+ P L H++ V GSL QILL+ SF E++ P + Q + G++DRAPG F FDPLGL KD AK Y+++E+KNGRLAMIAV G IH A + ++EQL++G +LP
Sbjct: 8 MAAFVSSLGLARASVGRGAVCT--KPGSAQLSMMAKSKSVPFMEAPAALDGSMVGDVGFDPLGFSNYIDLKFLREAELKHCRICMLAALGIIVQEVYQFPFYSGAPRLATDAHDYFVKFGSLNQILLFASFIELVAGTPGIIQTMRGETDRAPGYFAFDPLGLGKDKAKFERYQLSELKNGRLAMIAVGGFIHQAWMAKVPVLEQLSTGKLLP 218
BLAST of Gvermi12393.t1 vs. uniprot
Match: A0A2V3J1F6_9FLOR (Chlorophyll a-b binding protein 1B-21, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1F6_9FLOR) HSP 1 Score: 191 bits (484), Expect = 8.110e-58 Identity = 104/218 (47.71%), Postives = 134/218 (61.47%), Query Frame = 0
Query: 1 MAFVTSF-VPA--FAGARAAFSARVCTLSRRGVAGVVMAEKSPAVPFMDAPPALTPDMPGYVGFDPFNISAYLNVKWLQEAEIKHARICLLAILGFIVSELYQFPWYTDYPHLVIYRHNWAVTNGSLYQILLWCSFFEIMT-LPAVTQMVTGKSDRAPGDFKFDPLGLAKDPAKMAVYKVNEIKNGRLAMIAVSGAIHHAAITNQNLVEQLTSGNILP 214
MAFV+SF +PA A A++ + A V MAE S A+PF+ P + D GY GFDP + +N K+LQEAEIKHARIC+LA+LG ++ E Y FPWY++ P L H W V GSL QIL+W SF+EI+ PA+ QM+T S R PG + FDPLGL K A ++ +EIKNGRLAMIA+ G +H +T V+QL G LP
Sbjct: 1 MAFVSSFTLPARQTLSRSAICGAKLASQPVPSRASVRMAETSAAIPFLPKPQNIPEDAAGYAGFDPLGFTNVMNFKFLQEAEIKHARICMLAVLGILIPEQYVFPWYSEAPKLAAGIHQWGVNQGSLNQILIWSSFWEIVVGTPALIQMLTLDSPRQPGYYAFDPLGLGKTQAAFKRFQTSEIKNGRLAMIAIGGLLHQEFLTGMTPVQQLLEGKFLP 218 The following BLAST results are available for this feature:
BLAST of Gvermi12393.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gvermi12393.t1 ID=Gvermi12393.t1|Name=Gvermi12393.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=217bpback to top |