Gvermi12251.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12251.t1
Unique NameGvermi12251.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length257
Homology
BLAST of Gvermi12251.t1 vs. uniprot
Match: A0A2V3J0B5_9FLOR (Peroxisome biogenesis protein 19-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0B5_9FLOR)

HSP 1 Score: 274 bits (700), Expect = 2.130e-89
Identity = 146/256 (57.03%), Postives = 186/256 (72.66%), Query Frame = 0
Query:    1 MDDSELDGILDSALEAFDTVEDGSLVSSRTAEQSDVEETVRDAGLEREIQEESGTRSPVQTDETGKALEQALKALRELGVGEDQGRDQVNDEDMKLVEEFMTSLSSSLGNVSPQNQLDDQRPNTTQTSEAGHVNGGRPEVEKLVDTIVGQLLSEDVLKVPMMHMRTAYDEWLPKNVDSLSAEERERYTKQQQLVRQICVKYEDKADSAEIMELLSKMQDTGPPPEAVLKNLDSSSTGSPSFQASDVEKFGEMCPMQ 256
            MDD ELD ILD ALEAFD V D     S+ AE SD  E  +D    + I EE+ ++ P  TDE  +ALE+AL +L++LG+ +DQ ++ V D+D+KLVEEF+T+LSSS G ++ QN +D Q  + T   E     G  PE+EK VDTIVGQLLSEDVLK PMM MRTAY+EWLP+N  SL+ EE+ERYT Q+ LV QIC KY  KADS+EIM+LLSKMQDTG PP+A+LK +D++S+ SP+ +A DV+K  EMCPMQ
Sbjct:    1 MDDDELDNILDGALEAFDDVRDAPHTVSK-AEASDTAEIAQDIAPNQSIHEETASKPPFGTDEASEALEEALNSLKKLGISQDQEKEDVIDQDVKLVEEFLTTLSSSFGALNAQNPVDGQSADATAPGETESAKGAAPEMEKFVDTIVGQLLSEDVLKYPMMQMRTAYEEWLPENAGSLTKEEKERYTVQKNLVEQICDKYTAKADSSEIMDLLSKMQDTGSPPDAILKKIDNASSPSPAVEAPDVDKLVEMCPMQ 255          
BLAST of Gvermi12251.t1 vs. uniprot
Match: A0A7S1TLN9_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TLN9_9RHOD)

HSP 1 Score: 94.7 bits (234), Expect = 2.070e-19
Identity = 88/283 (31.10%), Postives = 133/283 (47.00%), Query Frame = 0
Query:    2 DDSELDGILDSALEAFDTVEDGSLVSSRTAEQSDVEETVRDAGLEREIQEESGTRSPVQTDETGKALEQALKALRELGVGEDQGRDQVND--------------EDMKLVEEFMTSLSSSL-GNVSPQNQLDDQRPNTTQTSEAGHVNGG----RPEVEKLVDTIVGQLLSEDVLKVPMMHMRTAYDEWLPKNVDSLSAEERERYTKQQQLVRQICVKYE-DKADSAEIMELLSKMQDTGPPPEAVLKNL--------DSSSTGSPSFQASDVEKFGEMCPMQ 256
            D  +LDGILDSAL+ F+      L  S+TA+ +D   + ++A   ++    SG     + D+   ALE+A++AL  LG G   G                     D   +E  + +L +SL GN+S  +       N    +E  H  GG      E+EK+++T++ Q+LS DVLK PM  MR  Y E L      LS E+R R+ KQ  ++ Q+   YE +  D + + ELL +MQ  G PP  +   +        D ++ G+ S     +EK  E C  Q
Sbjct:   12 DGDDLDGILDSALDEFEP----ELAHSQTADSADA--SPQEALSVQQESPLSGGSEKARKDDNA-ALEEAMRALNTLGAGLKSGSXXXXXXXXXXAASASNGGAHDAVAMEHALQALMNSLEGNLSEDDLQAMNDLNGAHAAEGSH--GGLAESTDELEKMMETVMQQVLSSDVLKEPMEQMRMQYRELLNSESADLSTEDRARFQKQSDIIEQVVAIYEHENPDFSRVTELLQEMQQHGEPPAHIADEIARSHGLEADENAAGT-SGDVEALEKLTEQCATQ 284          
BLAST of Gvermi12251.t1 vs. uniprot
Match: A0A1J3DGY0_NOCCA (Peroxisome biogenesis protein 19-1 (Fragment) n=5 Tax=Coluteocarpeae TaxID=1394505 RepID=A0A1J3DGY0_NOCCA)

HSP 1 Score: 84.7 bits (208), Expect = 1.340e-15
Identity = 71/245 (28.98%), Postives = 120/245 (48.98%), Query Frame = 0
Query:    3 DSELDGILDSALEAFDTV--------EDGSLVSSRTAEQSDVEETVRDAG--LEREIQEESGTRSPVQTDETGKALEQALKALRELGVG----EDQGRDQVNDEDMKLVEEFMTSLSSSLGNVSPQNQLDDQRPNTTQTSEAGHVNGGRPEVEKLVDTIVGQLLSEDVLKVPMMHMRTAYDEWLPKNVDSLSAEERERYTKQQQLVRQICVKYEDKAD-SAEIMELLSKMQDTGPPPEAVLKNLD 232
            D +LD +LDSAL+ F  +        EDG        E S +   V+  G  L     ++ G +   + D   +AL++  +  RE   G      + +   +D D  LVE+F+            +N  + Q                  ++E +V+T++ QLLS+D+L  PM  +   Y +WL +N  SLS E+ ERY+KQ +L++++   YE++ D S+ IME++ KMQ+ G PP  +++ +D
Sbjct:   65 DDDLDELLDSALDDFKDLNLAQRNQREDGEEKXXXXEELSPLPSGVQGLGMGLPDMRSKKKGNQKVSKEDHVAEALDKLREQTRETVKGLESISSKQQQPASDVDDALVEDFLKQF---------ENLSESQ------------------DLESIVETMMQQLLSKDILHEPMKEIGARYPKWLKENEASLSKEDYERYSKQYKLIKELNEVYENEPDNSSRIMEIMQKMQECGQPPNDIVQEMD 282          
BLAST of Gvermi12251.t1 vs. uniprot
Match: A9NRV0_PICSI (Uncharacterized protein n=1 Tax=Picea sitchensis TaxID=3332 RepID=A9NRV0_PICSI)

HSP 1 Score: 83.6 bits (205), Expect = 1.680e-15
Identity = 78/274 (28.47%), Postives = 130/274 (47.45%), Query Frame = 0
Query:    4 SELDGILDSALEAFDTVEDGSLVSSRTAEQSD--VEE-----TVRDAGL-------EREIQEESGTRS-PVQTD-ETGKALEQALKALRELGVGEDQGRDQVNDEDM---KLVEEFMTSLSSSLGNVSPQNQLDDQRPNTTQTSEAGHVNGGRPEVEKLVDTIVGQLLSEDVLKVPMMHMRTAYDEWLPKNVDSLSAEERERYTKQQQLVRQICVKYEDKADSAE-IMELLSKMQDTGPPPEAVLKNL----DSSSTGSPSFQASDVEKFGEMC 253
            ++LD +L+SAL+ F  +E  S   + T E S   +EE     +V+  G+       +R+ +++ GT S P+ TD    + LE+  +  R+      QG D    ED    KLVE                                    GG  +++ +VDT++ QLLS+++L  PM  +   Y +WL +   ++S E+ ERY+ Q +L++Q+C  YE + D+ + I+EL+ KMQD G PP  +++ L    +  S G P+      +  G  C
Sbjct:    9 NDLDDLLESALDDFGKLELDSTQRAATTENSSGLIEERQEKHSVQGLGVGLPSPPSKRKGKQKIGTSSKPMSTDAHVAETLEKLAQQTRQTL----QGLDSATQEDPAGEKLVENLFKQFEEI---------------------------GGTQDMQSVVDTMMRQLLSKEILHEPMKEIGERYPKWLEERKSTISKEDYERYSCQYELIKQLCKVYEAEPDNFDKIVELMQKMQDCGQPPSDIVQELAPGLNLGSEGGPALSELFADNSGSNC 251          
BLAST of Gvermi12251.t1 vs. uniprot
Match: A0A388JV43_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388JV43_CHABU)

HSP 1 Score: 82.4 bits (202), Expect = 9.900e-15
Identity = 53/154 (34.42%), Postives = 81/154 (52.60%), Query Frame = 0
Query:   79 GVGEDQGRDQVNDEDMKLVEEFMTSLSSSLGNVSPQNQLDDQRPNTTQTSEAGHVNGGRPEVEKLVDTIVGQLLSEDVLKVPMMHMRTAYDEWLPKNVDSLSAEERERYTKQQQLVRQICVKYEDKADSAE-IMELLSKMQDTGPPPEAVLKNL 231
            GV E  GRD V+     L  +   ++     N +      +      Q  EA    GG  +++ L++T++ QLLS++VL  PMM +   Y  WL  N   +S E+ +RY KQ +L+R +C  Y+ + D  E IMEL+ +MQD G PP  ++K L
Sbjct:  118 GVSELSGRDGVSATLQALANQTRQTVDRMDPNANEDATDQEFVEKLMQQFEA---LGGSQDIQGLMETMIKQLLSKEVLHAPMMEISERYPVWLEANKSKISEEDYKRYAKQLELMRSLCEMYDTRPDDFERIMELMQQMQDCGNPPSEIMKEL 268          
BLAST of Gvermi12251.t1 vs. uniprot
Match: PE192_ARATH (Peroxisome biogenesis protein 19-2 n=24 Tax=Brassicaceae TaxID=3700 RepID=PE192_ARATH)

HSP 1 Score: 80.1 bits (196), Expect = 2.710e-14
Identity = 68/261 (26.05%), Postives = 123/261 (47.13%), Query Frame = 0
Query:    5 ELDGILDSALEAFDTVEDGSLVSSRTAEQSDVEETVR--------DAGLEREIQEESGTRSPVQTDETGKALEQALKALREL--GVGEDQGRDQVNDEDMKLVEEFMTSLSSSLGNVSPQNQLDDQRPNTTQTSEAGHVNGGRPEVEKLVDTIVGQLLSEDVLKVPMMHMRTAYDEWLPKNVDSLSAEERERYTKQQQLVRQICVKYEDKAD-SAEIMELLSKMQDTGPPPEAVLKNLDSSSTGSPSFQASDVEKFGEMCP 254
            +LD +LDSAL+ F  +           E+ D +ET            GL     ++ G +   + D   +AL++  +  RE   G+     + Q    D  +VE+++    +  G+                            ++E +VDT++ QLLS+D+L  PM  +   Y +WL ++  SL+ EE +RY++Q +L++++ + YE++ + S +IME++ KMQ+ G PP  +++ +D      P F   D    G+M P
Sbjct:    9 DLDELLDSALDDFKDLNLTQRNGGVKKEEGDKKETESLPSGVQGLGMGLPDMRSKKKGKKKIAKEDHVTEALDKLREQTRETVKGLESLSSKQQPTGSDDAMVEDWIKQFENLTGS---------------------------NDLESIVDTMMQQLLSKDILHEPMKEIGARYPKWLEEHESSLNKEEFDRYSRQYELIKELNLVYENEPNNSTKIMEIMQKMQECGQPPSDIVQEMD------PGF---DFASLGQMSP 233          
BLAST of Gvermi12251.t1 vs. uniprot
Match: A0A0D3B9J4_BRAOL (Uncharacterized protein n=11 Tax=Brassiceae TaxID=981071 RepID=A0A0D3B9J4_BRAOL)

HSP 1 Score: 79.7 bits (195), Expect = 7.360e-14
Identity = 69/264 (26.14%), Postives = 125/264 (47.35%), Query Frame = 0
Query:    5 ELDGILDSALEAFDTVEDGSLVSSRTAEQSDVEETVRDAGLEREIQ-----------EESGTRSPVQTDETGKALEQALKALREL--GVGEDQGRDQVNDEDMKLVEEFMTSLSSSLGNVSPQNQLDDQRPNTTQTSEAGHVNGGRPEVEKLVDTIVGQLLSEDVLKVPMMHMRTAYDEWLPKNVDSLSAEERERYTKQQQLVRQICVKYEDKAD-SAEIMELLSKMQDTGPPPEAVLKNLDSSSTGSPSFQASDVEKFGEMCP 254
            +LD +LDSAL+ F   +D +L      E ++ ++    + L   +Q           +  G +   + D   +AL++  +  RE    +   Q +    D+D  +VE+F+    S  G+                            ++E +V+T++ QLLS+D+L  PM  +   Y +WL +N  S+S E+  RY++Q +L++++   YED+ + S +IME++ KMQ+ G PP  +++ +D      P F   D    G+M P
Sbjct:   59 DLDELLDSALDDF---KDLNLAQREGEEGNEKKKKQEPSPLPSGVQGLGMGLPDMRIKSKGKQKVSKQDHVAEALDKLREQTRETVESISSKQQQPASGDDDA-MVEDFLKQFESLAGS---------------------------QDLESIVETMMQQLLSKDILHEPMKEIGARYPKWLEENEGSISKEDYNRYSQQYKLIKELNAVYEDEPNNSVKIMEIMQKMQECGQPPNDIVQEMD------PGF---DFASLGQMSP 282          
BLAST of Gvermi12251.t1 vs. uniprot
Match: A0A565CN12_9BRAS (Uncharacterized protein n=1 Tax=Arabis nemorensis TaxID=586526 RepID=A0A565CN12_9BRAS)

HSP 1 Score: 78.6 bits (192), Expect = 9.450e-14
Identity = 74/261 (28.35%), Postives = 127/261 (48.66%), Query Frame = 0
Query:    5 ELDGILDSALEAFDTVEDGSLVSSRTAEQSDVEETVR--------DAGLEREIQEESGTRSPVQTDETGKALEQALKALRELGVGEDQ--GRDQVNDEDMKLVEEFMTSLSSSLGNVSPQNQLDDQRPNTTQTSEAGHVNGGRPEVEKLVDTIVGQLLSEDVLKVPMMHMRTAYDEWLPKNVDSLSAEERERYTKQQQLVRQICVKYEDKAD-SAEIMELLSKMQDTGPPPEAVLKNLDSSSTGSPSFQASDVEKFGEMCP 254
            +LD +LDSAL+ F   +D +L  S   E+ D ++T            GL     ++ G     + D   +AL +  +  RE   G D    + Q    D  +VE+++              Q +D       TS          ++E +VDT++ QLLS+D+L  PM  +   Y +WL ++  SL+ EE +RY++Q +L++++ + YE++ + S +IME++ KMQ+ G PP  +++ +D      P F   D    G+M P
Sbjct:    9 DLDELLDSALDDF---KDLNLTQSVKKEEGDGKKTEPLPSGVQGLGMGLPDMSSKKKGKHKVAKEDHVTEALGKLREQTRETVKGLDSLSSKKQPTGPDDAMVEDWIK-------------QFEDL------TSSQ--------DLESIVDTMMQQLLSKDILHEPMKEIGARYPKWLEEHETSLNKEEYKRYSRQYELIKELNLVYENEPNNSTKIMEIMQKMQECGQPPSDIVQEMD------PGF---DFASLGQMSP 230          
BLAST of Gvermi12251.t1 vs. uniprot
Match: A0A7J7C6U1_TRIWF (Peroxisome biogenesis protein 19-2 n=2 Tax=Tripterygium wilfordii TaxID=458696 RepID=A0A7J7C6U1_TRIWF)

HSP 1 Score: 78.6 bits (192), Expect = 9.760e-14
Identity = 69/252 (27.38%), Postives = 132/252 (52.38%), Query Frame = 0
Query:    5 ELDGILDSALEAFDTVEDGSLVSSRTAEQSDVEETVRDAGLEREIQEESGTRSP-VQTDETGKALEQALKALRELGVGEDQGRDQVNDEDMKLVEEFMTSLSSSLGNVSPQNQLDDQRPNTTQTSEAGHVNGGRPEVEKLVDTIVGQLLSEDVLKVPMMHMRTAYDEWLPKNVDSLSAEERERYTKQQQLVRQICVKYE-DKADSAEIMELLSKMQDTGPPPEAVLKNLDSSSTGSPSFQASDVEKFGEMCP 254
            +LD +LDSAL+ F ++   +L +S+   + D  E+ +++ L  +  +  G   P +++ + GK      K  ++  V E    D++ ++  + V+   +  S+ L +      ++D      Q  E      G  ++E +V+T++ QLLS+++L  PM  +   Y  WL +   SLS E+ ERY +Q QL++++   Y+ D ++ A+I+EL+ KMQ+ G PP  +++ L      +P F   D+   G++ P
Sbjct:    7 DLDALLDSALDDFQSL---NLSNSQQRSEGDGAESRKESALLPKGVQGLGMGLPDLKSKKKGKQ-----KVSKDAHVAE--ALDKLREQTREAVKGVESVTSAQLDDFPKDEMMEDW---VKQFEELA----GSQDMESIVETMMQQLLSKEILYEPMKEIGERYPNWLEERKTSLSKEDYERYCRQYQLIKELNDVYDNDPSNFAKIVELMQKMQECGQPPSDIVREL------APDF---DLASLGQITP 232          
BLAST of Gvermi12251.t1 vs. uniprot
Match: UPI00053C3653 (peroxisome biogenesis protein 19-2 isoform X1 n=2 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C3653)

HSP 1 Score: 78.2 bits (191), Expect = 1.250e-13
Identity = 44/120 (36.67%), Postives = 75/120 (62.50%), Query Frame = 0
Query:  136 GRPEVEKLVDTIVGQLLSEDVLKVPMMHMRTAYDEWLPKNVDSLSAEERERYTKQQQLVRQICVKYEDKAD-SAEIMELLSKMQDTGPPPEAVLKNLDSSSTGSPSFQASDVEKFGEMCP 254
            G  ++E +VDT++ QLLS+D+L  PM  +   Y +WL ++  SLS EE ERY++Q +L++++   YE++ + S +IM+++ KMQ+ G PP  +++ +D      P F   D    G+M P
Sbjct:  117 GSKDLESIVDTMMQQLLSKDILHEPMKEIGERYPKWLEEHKASLSKEEYERYSRQYELIKELNGVYENEPNNSIKIMDIMQKMQECGQPPSDIVQEID------PGF---DFASLGQMSP 227          
The following BLAST results are available for this feature:
BLAST of Gvermi12251.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J0B5_9FLOR2.130e-8957.03Peroxisome biogenesis protein 19-1 n=1 Tax=Gracila... [more]
A0A7S1TLN9_9RHOD2.070e-1931.10Hypothetical protein n=1 Tax=Erythrolobus australi... [more]
A0A1J3DGY0_NOCCA1.340e-1528.98Peroxisome biogenesis protein 19-1 (Fragment) n=5 ... [more]
A9NRV0_PICSI1.680e-1528.47Uncharacterized protein n=1 Tax=Picea sitchensis T... [more]
A0A388JV43_CHABU9.900e-1534.42Uncharacterized protein n=1 Tax=Chara braunii TaxI... [more]
PE192_ARATH2.710e-1426.05Peroxisome biogenesis protein 19-2 n=24 Tax=Brassi... [more]
A0A0D3B9J4_BRAOL7.360e-1426.14Uncharacterized protein n=11 Tax=Brassiceae TaxID=... [more]
A0A565CN12_9BRAS9.450e-1428.35Uncharacterized protein n=1 Tax=Arabis nemorensis ... [more]
A0A7J7C6U1_TRIWF9.760e-1427.38Peroxisome biogenesis protein 19-2 n=2 Tax=Tripter... [more]
UPI00053C36531.250e-1336.67peroxisome biogenesis protein 19-2 isoform X1 n=2 ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006708Pex19 proteinPFAMPF04614Pex19coord: 130..256
e-value: 3.9E-25
score: 89.0
IPR006708Pex19 proteinPANTHERPTHR12774PEROXISOMAL BIOGENESIS FACTOR 19coord: 46..246
IPR038322Pex19, C-terminal domain superfamilyGENE3D1.20.120.900Pex19, mPTS binding domaincoord: 129..237
e-value: 2.4E-25
score: 91.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 105..132
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 229..243
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 215..256
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 25..68
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 34..53
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 105..139

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:3977977..3978747 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12251.t1Gvermi12251.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 3977977..3978747 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12251.t1 ID=Gvermi12251.t1|Name=Gvermi12251.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=257bp
MDDSELDGILDSALEAFDTVEDGSLVSSRTAEQSDVEETVRDAGLEREIQ
EESGTRSPVQTDETGKALEQALKALRELGVGEDQGRDQVNDEDMKLVEEF
MTSLSSSLGNVSPQNQLDDQRPNTTQTSEAGHVNGGRPEVEKLVDTIVGQ
LLSEDVLKVPMMHMRTAYDEWLPKNVDSLSAEERERYTKQQQLVRQICVK
YEDKADSAEIMELLSKMQDTGPPPEAVLKNLDSSSTGSPSFQASDVEKFG
EMCPMQ*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006708Pex19
IPR038322Pex19_C_sf