Gvermi12278.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male
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Overview
Homology
BLAST of Gvermi12278.t1 vs. uniprot
Match: A0A2V3J0D5_9FLOR (Ribosome-binding factor A n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0D5_9FLOR) HSP 1 Score: 244 bits (622), Expect = 1.230e-75 Identity = 133/212 (62.74%), Postives = 163/212 (76.89%), Query Frame = 0
Query: 137 SQVHR---TKLRRCDIYCRRGSKHRDRRFGDGRRSNRVSELVKREISALIDDGYRRAFFHDKSAGPLLLSVVDVRCSDDLRHARVQVSIMGSTEQKDNTMKWLRGARKGLRGDLARRVYLKHTPELMFEESQMAEAVNTVNIINEIAAENERKR-EMADFSRGSQTKDLYENDLFDKELELDASLDDAIIADDMEDYD----DSGLVIDVED 340
SQV R T +R +I+CRRGSK R+RRF DGRR NRVSEL+KREIS +IDD YRRAF + PLL+SVVDVRCSDDLRHARV+VS++G+ +QK+N M+WL+ ARK LR +LA RVYLKHTPELMF+ESQMA+A NTVNI+N I AE ERK+ E+ + Q D YE D+FD+ L+LDASLDDAII DDM + + DS +ID+ED
Sbjct: 30 SQVPRRYATSRKRYEIHCRRGSKGRERRFSDGRRPNRVSELIKREISPIIDDAYRRAFRGELQESPLLVSVVDVRCSDDLRHARVEVSVLGTDDQKENIMRWLKAARKELRVELAHRVYLKHTPELMFDESQMAQATNTVNILNRITAEKERKQSELGGVGQKGQRLDAYERDMFDQGLDLDASLDDAIIVDDMREEEXXXXDSEFIIDIED 241
BLAST of Gvermi12278.t1 vs. uniprot
Match: A0A5J4Z6Z3_PORPP (Ribosome-binding factor A n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z6Z3_PORPP) HSP 1 Score: 86.3 bits (212), Expect = 1.700e-16 Identity = 59/151 (39.07%), Postives = 90/151 (59.60%), Query Frame = 0
Query: 166 RRSNRVSELVKREISALIDDGYR-RAFFHD-KSAGPLLLSVVDVRCSDDLRHARVQVSIMGSTEQKDNTMKWLRGARKGLRGDLARRV-YLKHTPELMFEESQMAEAVNTVNIINEIAAENERKREMADFSRGSQTKDLYENDLFDKELEL 313
RR NRV+E++KREIS ++ D Y A FH S L+LSV+DV S DLR+AR++VS+ + +KWL G R+ LR ++A+R+ ++K P+L F+ES A TV+I++E+A + E +F D + D D+E +L
Sbjct: 4 RRPNRVAEMIKREISMVLRDQYTTHARFHGLPSWSTLMLSVMDVNVSPDLRNARIEVSM--AQADMSRVLKWLNGNRRTLRYEMAQRMTHMKIMPDLYFKESGAGGAFRTVSILDELAKKRELVAATTNFDDLEADSD--DEDASDEEFDL 150
BLAST of Gvermi12278.t1 vs. uniprot
Match: A0A0D6AME9_9CHRO (Ribosome-binding factor A n=2 Tax=Geminocystis TaxID=669357 RepID=A0A0D6AME9_9CHRO) HSP 1 Score: 82.4 bits (202), Expect = 1.400e-15 Identity = 46/119 (38.66%), Postives = 72/119 (60.50%), Query Frame = 0
Query: 162 FGDGRRSNRVSELVKREISALIDDGYRRAFFHDKSAGPLLLSVVDVRCSDDLRHARVQVSIMGSTEQKDNTMKWLRGARKGLRGDLARRVYLKHTPELMF-EESQMAEAVNTVNIINEI 279
+ RR +VS L+K+EIS ++ G + D G ++S+ +V S DL+HARV VSI G++E K TM+ L+ +R L +R+ L+HTPE+ F E+S + + N +N+IN I
Sbjct: 1 MANSRRVEKVSSLIKKEISQMLISGIK-----DDRVGAGMVSITEVEISGDLQHARVFVSIYGTSEAKKETMEGLKACTPFVRKALGQRISLRHTPEIRFIEDSSLEKGDNLINLINRI 114
BLAST of Gvermi12278.t1 vs. uniprot
Match: UPI001687FB58 (30S ribosome-binding factor RbfA n=1 Tax=Cyanobacteria TaxID=1117 RepID=UPI001687FB58) HSP 1 Score: 80.9 bits (198), Expect = 5.780e-15 Identity = 44/121 (36.36%), Postives = 76/121 (62.81%), Query Frame = 0
Query: 166 RRSNRVSELVKREISALIDDGYRRAFFHDKSAGPLLLSVVDVRCSDDLRHARVQVSIMGSTEQKDNTMKWLRGARKGLRGDLARRVYLKHTPELMF-EESQMAEAVNTVNIINEIAAENER 285
RR RV+EL+KRE+S ++ G + D G ++SV DV+ + DL+HA++ VSI G++E K TM L+ A +R +L +R+ L+ TPE++F E++ + ++++N ++ E ER
Sbjct: 5 RRIERVAELIKREVSQMLLSGIK-----DDRVGAGIVSVTDVQVAGDLQHAKIFVSIYGTSEAKAETMAGLKSATGFVRSELGQRIRLRRTPEVLFLEDASLERGDKVLSLLNRLSQERER 120
BLAST of Gvermi12278.t1 vs. uniprot
Match: A0A2N5JSV1_9CYAN (Ribosome-binding factor A n=1 Tax=Cyanobacteria bacterium M5B4 TaxID=2054928 RepID=A0A2N5JSV1_9CYAN) HSP 1 Score: 79.0 bits (193), Expect = 2.950e-14 Identity = 47/122 (38.52%), Postives = 74/122 (60.66%), Query Frame = 0
Query: 166 RRSNRVSELVKREISALIDDGYRRAFFHDKSAGPLLLSVVDVRCSDDLRHARVQVSIMGSTEQKDNTMKWLRGARKGLRGDLARRVYLKHTPELMFEESQ-MAEAVNTVNIINEIAAENERK 286
RR RV+EL+KRE+SALI + D G ++S+ V S DL+HARV VSI G+ + TM+ L A +R +L R+ L+ PE++F+E + E V ++++N+++AE E+K
Sbjct: 5 RRVERVAELIKREVSALIMRDIK-----DDRVGAGMVSITAVEVSGDLQHARVFVSIYGTDAARQETMEGLGAATSFIRRELGHRLNLRRAPEVVFKEDRSFEEGVKVLSLLNKLSAEREQK 121
BLAST of Gvermi12278.t1 vs. uniprot
Match: A0A2T1DVL6_9CYAN (Ribosome-binding factor A n=1 Tax=Stenomitos frigidus ULC18 TaxID=2107698 RepID=A0A2T1DVL6_9CYAN) HSP 1 Score: 78.6 bits (192), Expect = 4.390e-14 Identity = 47/127 (37.01%), Postives = 79/127 (62.20%), Query Frame = 0
Query: 166 RRSNRVSELVKREISALIDDGYRRAFFHDKSAGPLLLSVVDVRCSDDLRHARVQVSIMGSTEQKDNTMKWLRGARKGLRGDLARRVYLKHTPELMF-EESQMAEAVNTVNIINEIAAENERKREMAD 291
RR RVSEL+KRE+S ++ G + D G ++SV DV+ + DL+HA++ VSI G++E K TM L+ A +R +L +R+ L+ TPE++F E+S + +++++ ++ E RE+AD
Sbjct: 5 RRVARVSELIKREVSQMLLSGIK-----DDRVGSGIVSVTDVQVAGDLQHAKIFVSIYGTSEAKAETMAGLKSATGFVRSELGQRIRLRRTPEVIFLEDSSLERGDKVLSLLSRLSQE----RELAD 122
BLAST of Gvermi12278.t1 vs. uniprot
Match: RBFA_ACET2 (Ribosome-binding factor A n=2 Tax=Acetivibrio thermocellus TaxID=1515 RepID=RBFA_ACET2) HSP 1 Score: 76.3 bits (186), Expect = 2.250e-13 Identity = 45/126 (35.71%), Postives = 77/126 (61.11%), Query Frame = 0
Query: 167 RSNRVSELVKREISALIDDGYRRAFFHDKSAGPLLLSVVDVRCSDDLRHARVQVSIMGSTEQKDNTMKWLRGARKGLRGDLARRVYLKHTPELMFE-ESQMAEAVNTVNIINEIAAENERKREMAD 291
R R+SE +KREIS +I + + D L+ S+ +V + DLR+A+V VS+MGS E+K N+++ L+ A +R ++ RRV L++TPE+ FE ++ + +INE +A+N+ ++ D
Sbjct: 3 RIERISEEIKREISDIIQNELK-----DPRLSKLI-SITEVNVTKDLRYAKVYVSVMGSEEEKANSLEGLKSAAGFIRREIGRRVQLRYTPEIHFELDNSIERGAYITKLINETSAQNKGSKDPED 122
BLAST of Gvermi12278.t1 vs. uniprot
Match: A0A2E0FP89_9BACT (Ribosome-binding factor A n=1 Tax=Nitrospina sp. TaxID=2024844 RepID=A0A2E0FP89_9BACT) HSP 1 Score: 75.9 bits (185), Expect = 3.020e-13 Identity = 45/122 (36.89%), Postives = 76/122 (62.30%), Query Frame = 0
Query: 166 RRSNRVSELVKREISALIDDGYRRAFFHDKSAGPLLLSVVDVRCSDDLRHARVQVSIMGSTEQKDNTMKWLRGARKGLRGDLARRVYLKHTPELMFEESQMAEAVNTVN-IINEIAAENERK 286
+RS R+ EL+ EIS L+ G + D G L+ V+V SD+L+HA++ VS+MGS ++K +T+ L+ A+ +R L + +YLK+ P+L F++ + AE V + I+NE+ E++ K
Sbjct: 4 KRSQRIQELLLEEISKLLQGGLK-----DPRIGFATLTRVEV--SDNLKHAKIFVSVMGSEKEKSDTLNALKSAKGFIRNTLGKNLYLKYLPDLEFKKDENAEHVEKITRILNELHPESDSK 118
BLAST of Gvermi12278.t1 vs. uniprot
Match: D8FXY4_9CYAN (Ribosome-binding factor A n=1 Tax=Kamptonema sp. PCC 6506 TaxID=272129 RepID=D8FXY4_9CYAN) HSP 1 Score: 75.5 bits (184), Expect = 6.530e-13 Identity = 49/137 (35.77%), Postives = 78/137 (56.93%), Query Frame = 0
Query: 166 RRSNRVSELVKREISALIDDGYRRAFFHDKSAGPLLLSVVDVRCSDDLRHARVQVSIMGSTEQKDNTMKWLRGARKGLRGDLARRVYLKHTPELMF-EESQMAEAVNTVNIINEIAAENERKREMADFSRGSQTKDL 301
RR RVS L+KRE+S L+ +G + D G ++SV DV S DL+HA++ VSI G+ E K TM L+ A +R +L RV L+ TPE++F E+ + + ++N+++ ERK ++ D + D+
Sbjct: 5 RRVERVSSLIKREVSLLLLNGIK-----DDRVGAGIVSVTDVDVSGDLQHAKIFVSIYGTDEAKAETMAGLKSATGYVRSELGHRVGLRRTPEVVFLEDHSLERGDKMLLLLNKLS--QERKPDILDEEESAPDDDI 134
BLAST of Gvermi12278.t1 vs. uniprot
Match: A0A7X6ZQ64_9BACT (Ribosome-binding factor A n=1 Tax=Lentisphaerae bacterium TaxID=1932692 RepID=A0A7X6ZQ64_9BACT) HSP 1 Score: 74.7 bits (182), Expect = 7.290e-13 Identity = 49/120 (40.83%), Postives = 72/120 (60.00%), Query Frame = 0
Query: 167 RSNRVSELVKREISA-LIDDGYRRAFFHDKSAGPLLLSVVDVRCSDDLRHARVQVSIMGSTEQKDNTMKWLRGARKGLRGDLARRVYLKHTPELMFEESQ-MAEAVNTVNIINEIAAENE 284
R R++ELV+RE+S+ L+ G H +S+V+V S DLR A V VSIMGS EQ D MKWLR R L+ +A+ V LK+TP L+F+++Q +A + I++E+ + E
Sbjct: 5 RIKRLNELVRRELSSSLLHVG------HGDEIEVSRISIVEVDISRDLRSAGVLVSIMGSAEQADEIMKWLRSNRVELQSRIAKGVSLKYTPRLVFKQTQSIARGDRVLGILSELDIDEE 118 The following BLAST results are available for this feature:
BLAST of Gvermi12278.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gvermi12278.t1 ID=Gvermi12278.t1|Name=Gvermi12278.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=371bpback to top |