Gvermi12243.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male
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Overview
Homology
BLAST of Gvermi12243.t1 vs. uniprot
Match: R7QB24_CHOCR (U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QB24_CHOCR) HSP 1 Score: 198 bits (504), Expect = 3.960e-62 Identity = 103/133 (77.44%), Postives = 115/133 (86.47%), Query Frame = 0
Query: 12 QTSPSSLDAFKLPGAASLYEQLDKLVLVCLRDGRNFFGWLRSFDQYANLILDNTVERLSVENMYADVPMGIFVIRGENVMLLGEVDEEKEMRVGNSMKQVSEREIRRALAKAKEN--AETRKSVLEWAIPEEF 142
+T+ S A KLPGAASLYEQLDKLVLVCLRDGRNFFGWLRSFDQYANLILDNTVERL+VE+ YADVP+GIFVIRGENVMLLGEVDEE+E+ VG+SMKQV+E EIRRALA KE+ A R +EW IPEE+
Sbjct: 81 ETTQSGSGAIKLPGAASLYEQLDKLVLVCLRDGRNFFGWLRSFDQYANLILDNTVERLTVEDSYADVPIGIFVIRGENVMLLGEVDEERELNVGSSMKQVTEPEIRRALAAIKEDRAARRRGEKVEWPIPEEY 213
BLAST of Gvermi12243.t1 vs. uniprot
Match: A0A293MTH1_ORNER (U6 snRNA-associated Sm-like protein LSm1 (Fragment) n=3 Tax=Ornithodoros TaxID=6937 RepID=A0A293MTH1_ORNER) HSP 1 Score: 118 bits (295), Expect = 2.180e-31 Identity = 61/120 (50.83%), Postives = 84/120 (70.00%), Query Frame = 0
Query: 14 SPSSLDAFKLPGAASLYEQLDKLVLVCLRDGRNFFGWLRSFDQYANLILDNTVERLSVENMYADVPMGIFVIRGENVMLLGEVDEEKEMRVGNSMKQVSE-REIRRALAKAKENAETRKS 132
S +++ F LPG ASL E+LDK +LV LRDGR G+LRS DQ+ANL+L T+ER+ V Y D+P GIF++RGENV+LLGE+D+EKE V V E E++R A+AK+ E +++
Sbjct: 2 SHNNMTLFYLPGTASLLEELDKKLLVFLRDGRTLIGYLRSIDQFANLVLHKTIERIHVGKQYGDIPRGIFIVRGENVVLLGEIDQEKERLVNLEEVSVQEILEVQRLEAEAKQERERQRA 121
BLAST of Gvermi12243.t1 vs. uniprot
Match: A0A1Z5L2V0_ORNMO (U6 snRNA-associated Sm-like protein LSm1 (Fragment) n=1 Tax=Ornithodoros moubata TaxID=6938 RepID=A0A1Z5L2V0_ORNMO) HSP 1 Score: 115 bits (289), Expect = 7.130e-31 Identity = 53/91 (58.24%), Postives = 69/91 (75.82%), Query Frame = 0
Query: 14 SPSSLDAFKLPGAASLYEQLDKLVLVCLRDGRNFFGWLRSFDQYANLILDNTVERLSVENMYADVPMGIFVIRGENVMLLGEVDEEKEMRV 104
S +++ F LPG ASL E+LDK +LV LRDGR G+LRS DQ+ANL+L T+ER+ V Y D+P GIF++RGENV+LLGE+DEE+E V
Sbjct: 2 SQNNMTLFYLPGTASLLEELDKKLLVFLRDGRTLIGYLRSIDQFANLVLHRTIERIHVGKQYGDIPRGIFIVRGENVVLLGEIDEERERAV 92
BLAST of Gvermi12243.t1 vs. uniprot
Match: A0A507E1X1_9FUNG (U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507E1X1_9FUNG) HSP 1 Score: 115 bits (288), Expect = 2.220e-30 Identity = 59/108 (54.63%), Postives = 77/108 (71.30%), Query Frame = 0
Query: 23 LPGAASLYEQLDKLVLVCLRDGRNFFGWLRSFDQYANLILDNTVERLSVENMYADVPMGIFVIRGENVMLLGEVDEEKEMRVGNSMKQVSEREIRRALAKAKENAETR 130
LPG+ASL + +DK +LV LRD R GWLRS+DQ+ANL+L +TVER V + Y DV GIFVIRGENV+LLGE+D+EKE + S+K V E+R A + +E + R
Sbjct: 5 LPGSASLVDCVDKKILVILRDSRKLIGWLRSYDQFANLVLQDTVERTYVGDQYGDVYRGIFVIRGENVVLLGEIDKEKETALMKSLKNVPVAEVREAQKQEQERRKIR 112
BLAST of Gvermi12243.t1 vs. uniprot
Match: A0A6P7UPI0_IXOSC (U6 snRNA-associated Sm-like protein LSm1 n=4 Tax=Ixodes TaxID=6944 RepID=A0A6P7UPI0_IXOSC) HSP 1 Score: 114 bits (285), Expect = 6.150e-30 Identity = 60/115 (52.17%), Postives = 83/115 (72.17%), Query Frame = 0
Query: 21 FKLPGAASLYEQLDKLVLVCLRDGRNFFGWLRSFDQYANLILDNTVERLSVENMYADVPMGIFVIRGENVMLLGEVDEEKEMRVGNSMKQVSER---EIRRALAKAKENAETRKS 132
F LPG ASL E+LDK +LV LRDGR G+LRS DQ+ANL+L T+ER+ V Y D+P GIFV+RG+NV+LLGE+DE KE V +++VS E++R A+AK++ E +++
Sbjct: 4 FYLPGTASLLEELDKKLLVFLRDGRTLIGYLRSIDQFANLVLHKTIERIHVRKQYGDIPRGIFVVRGDNVVLLGEIDEAKERDV--DLEEVSVEQILEVQRLEAEAKQDQERQRA 116
BLAST of Gvermi12243.t1 vs. uniprot
Match: A0A090X7S9_IXORI (U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=Ixodes ricinus TaxID=34613 RepID=A0A090X7S9_IXORI) HSP 1 Score: 114 bits (285), Expect = 1.090e-29 Identity = 60/115 (52.17%), Postives = 83/115 (72.17%), Query Frame = 0
Query: 21 FKLPGAASLYEQLDKLVLVCLRDGRNFFGWLRSFDQYANLILDNTVERLSVENMYADVPMGIFVIRGENVMLLGEVDEEKEMRVGNSMKQVSER---EIRRALAKAKENAETRKS 132
F LPG ASL E+LDK +LV LRDGR G+LRS DQ+ANL+L T+ER+ V Y D+P GIFV+RG+NV+LLGE+DE KE V +++VS E++R A+AK++ E +++
Sbjct: 4 FYLPGTASLLEELDKKLLVFLRDGRTLIGYLRSIDQFANLVLHKTIERIHVRKQYGDIPRGIFVVRGDNVVLLGEIDEAKERDV--DLEEVSVEQILEVQRLEAEAKQDQERQRA 116
BLAST of Gvermi12243.t1 vs. uniprot
Match: UPI00142558C8 (U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI00142558C8) HSP 1 Score: 113 bits (283), Expect = 1.310e-29 Identity = 57/94 (60.64%), Postives = 71/94 (75.53%), Query Frame = 0
Query: 23 LPGAASLYEQLDKLVLVCLRDGRNFFGWLRSFDQYANLILDNTVERLSVENMYADVPMGIFVIRGENVMLLGEVDEEKEMRVGNSMKQVSEREI 116
LPG ASL E+LDK +LV LRDGR G LRS DQ+ANL+L T+ER+ V N Y D+P G+FVIRGENV+LLGE+D EK+ +V +K+VS EI
Sbjct: 7 LPGTASLIEELDKKLLVLLRDGRTLIGTLRSIDQFANLVLHKTIERIHVGNKYGDIPRGVFVIRGENVVLLGEIDSEKDPKV--ELKEVSIDEI 98
BLAST of Gvermi12243.t1 vs. uniprot
Match: A0A7S3GS20_9STRA (U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GS20_9STRA) HSP 1 Score: 112 bits (281), Expect = 1.520e-29 Identity = 54/103 (52.43%), Postives = 78/103 (75.73%), Query Frame = 0
Query: 19 DAFKLPGAASLYEQLDKLVLVCLRDGRNFFGWLRSFDQYANLILDNTVERLSVENMYADVPMGIFVIRGENVMLLGEVDEEKEMRVGNSMKQVSEREIRRALA 121
++ LPGAASL EQ+D +L+ LRDGRN G LRSFDQY NLIL++T ER+ ++ Y D+P+G+F++RG+N++LLGEVDE+KE ++++VS E+ LA
Sbjct: 6 ESLYLPGAASLAEQIDTKILIVLRDGRNLVGILRSFDQYVNLILEDTYERVIFQDKYCDIPLGLFLVRGDNLILLGEVDEDKE--ASQNLEKVSPAELTELLA 106
BLAST of Gvermi12243.t1 vs. uniprot
Match: L7M3M9_RHIPC (U6 snRNA-associated Sm-like protein LSm1 n=13 Tax=Ixodidae TaxID=6939 RepID=L7M3M9_RHIPC) HSP 1 Score: 112 bits (281), Expect = 2.480e-29 Identity = 52/81 (64.20%), Postives = 64/81 (79.01%), Query Frame = 0
Query: 21 FKLPGAASLYEQLDKLVLVCLRDGRNFFGWLRSFDQYANLILDNTVERLSVENMYADVPMGIFVIRGENVMLLGEVDEEKE 101
F LPG ASL E+LDK +LV LRDGR G+LRS DQ+ANL+L T+ER+ V Y D+P GIFVIRG+NV+LLGE+DE+KE
Sbjct: 4 FYLPGTASLLEELDKKLLVFLRDGRTLIGYLRSIDQFANLVLHQTIERIHVGRQYGDIPRGIFVIRGDNVVLLGEIDEDKE 84
BLAST of Gvermi12243.t1 vs. uniprot
Match: UPI000C75A328 (U6 snRNA-associated Sm-like protein LSm1 n=1 Tax=Eurytemora affinis TaxID=88015 RepID=UPI000C75A328) HSP 1 Score: 112 bits (281), Expect = 2.550e-29 Identity = 51/94 (54.26%), Postives = 76/94 (80.85%), Query Frame = 0
Query: 23 LPGAASLYEQLDKLVLVCLRDGRNFFGWLRSFDQYANLILDNTVERLSVENMYADVPMGIFVIRGENVMLLGEVDEEKEMRVGNSMKQVSEREI 116
LPG A+L E+LDK ++V LRDGR G+LRS DQ+ANL++ N +ER+ V++ Y D+P+G+FV+RGENV+LLGE++E++E++ +KQVS +EI
Sbjct: 6 LPGTATLLEELDKKLMVLLRDGRTLIGYLRSVDQFANLVIHNCIERIHVKDEYGDIPLGVFVVRGENVVLLGEIEEKEELK--GKLKQVSLKEI 97 The following BLAST results are available for this feature:
BLAST of Gvermi12243.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gvermi12243.t1 ID=Gvermi12243.t1|Name=Gvermi12243.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=143bpback to top |