Gvermi12387.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male
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Overview
Homology
BLAST of Gvermi12387.t1 vs. uniprot
Match: R7QDD7_CHOCR (Histone H2B n=2 Tax=Chondrus crispus TaxID=2769 RepID=R7QDD7_CHOCR) HSP 1 Score: 212 bits (540), Expect = 4.100e-69 Identity = 113/125 (90.40%), Postives = 120/125 (96.00%), Query Frame = 0
Query: 2 PKGGGKSVPVAEKKVAKKGISGGGVEKTTRKKKRSESYSIYIYKVLKQVHPDTGISSKAMSIMNSFVADLFERIATEAAKLASYNNTKTLTSREIQTAVRLLLPGELAKHAVSEGTKAVTKYSSS 126
PKG K VP AEKK+AKKG+SGG VEKTT++KKR+ESYSIYIYKVLKQVHPDTGISSKAMSIMNSFVADLFERIA+E+AKLASYNNTKTLTSREIQTAVRLLLPGELAKHAVSEGTKAVTKYSSS
Sbjct: 3 PKG-NKGVPTAEKKIAKKGVSGGAVEKTTKRKKRNESYSIYIYKVLKQVHPDTGISSKAMSIMNSFVADLFERIASESAKLASYNNTKTLTSREIQTAVRLLLPGELAKHAVSEGTKAVTKYSSS 126
BLAST of Gvermi12387.t1 vs. uniprot
Match: A0A2V3J066_9FLOR (Histone H2B n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J066_9FLOR) HSP 1 Score: 207 bits (526), Expect = 5.240e-67 Identity = 113/121 (93.39%), Postives = 118/121 (97.52%), Query Frame = 0
Query: 6 GKSVPVAEKKVAKKGISGGGVEKTTRKKKRSESYSIYIYKVLKQVHPDTGISSKAMSIMNSFVADLFERIATEAAKLASYNNTKTLTSREIQTAVRLLLPGELAKHAVSEGTKAVTKYSSS 126
GKSVPVAEKKVAKKGIS G EK++RKKKR+ESYSIYIYKVLKQVHPDTGISSKAMSIMNSFVADLFERIATEAAKL+SYN+TKTLTSREIQTAVRLLLPGELAKHAVSEGTKAVTKYSSS
Sbjct: 5 GKSVPVAEKKVAKKGISA-GPEKSSRKKKRNESYSIYIYKVLKQVHPDTGISSKAMSIMNSFVADLFERIATEAAKLSSYNHTKTLTSREIQTAVRLLLPGELAKHAVSEGTKAVTKYSSS 124
BLAST of Gvermi12387.t1 vs. uniprot
Match: Q7XY84_GRIJA (Histone H2B n=1 Tax=Griffithsia japonica TaxID=83288 RepID=Q7XY84_GRIJA) HSP 1 Score: 200 bits (509), Expect = 2.050e-64 Identity = 108/121 (89.26%), Postives = 114/121 (94.21%), Query Frame = 0
Query: 6 GKSVPVAEKKVAKKGISGGGVEKTTRKKKRSESYSIYIYKVLKQVHPDTGISSKAMSIMNSFVADLFERIATEAAKLASYNNTKTLTSREIQTAVRLLLPGELAKHAVSEGTKAVTKYSSS 126
GKSVP+AEKKVAKK + G EK T+KKKRSESYSIYIYKVLKQVHP+TGISSKAMSIMNSFV DLFERIATEAAKLA+YNN+KTLTSREIQTAVRLLLPGELAKHAVSEGTKAVTKYSSS
Sbjct: 5 GKSVPIAEKKVAKKAVPG-ATEKVTKKKKRSESYSIYIYKVLKQVHPETGISSKAMSIMNSFVDDLFERIATEAAKLATYNNSKTLTSREIQTAVRLLLPGELAKHAVSEGTKAVTKYSSS 124
BLAST of Gvermi12387.t1 vs. uniprot
Match: A0A1X6P9Y0_PORUM (Histone H2B n=2 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P9Y0_PORUM) HSP 1 Score: 190 bits (482), Expect = 3.030e-60 Identity = 104/123 (84.55%), Postives = 111/123 (90.24%), Query Frame = 0
Query: 6 GKSVPVAEKKVAKKGISGGGVEKTTRK--KKRSESYSIYIYKVLKQVHPDTGISSKAMSIMNSFVADLFERIATEAAKLASYNNTKTLTSREIQTAVRLLLPGELAKHAVSEGTKAVTKYSSS 126
GKSVP+AEKKVAKKG++ + +K KKRSESYSIYIYKVLKQVHPDTGISSKAMSIMNSFV DLFERIA EAAKL+SYN +KTLTSREIQTAVRLLLPGELAKHAVSEGTKAVTKYSSS
Sbjct: 5 GKSVPIAEKKVAKKGVASADKDGKDKKRTKKRSESYSIYIYKVLKQVHPDTGISSKAMSIMNSFVNDLFERIAAEAAKLSSYNKSKTLTSREIQTAVRLLLPGELAKHAVSEGTKAVTKYSSS 127
BLAST of Gvermi12387.t1 vs. uniprot
Match: A0A1X6NSL0_PORUM (Histone H2B n=2 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NSL0_PORUM) HSP 1 Score: 192 bits (488), Expect = 3.620e-60 Identity = 106/125 (84.80%), Postives = 112/125 (89.60%), Query Frame = 0
Query: 6 GKSVPVAEKKVAKKGISG----GGVEKTTRKKKRSESYSIYIYKVLKQVHPDTGISSKAMSIMNSFVADLFERIATEAAKLASYNNTKTLTSREIQTAVRLLLPGELAKHAVSEGTKAVTKYSSS 126
GKSVP+AEKKVAKKG++ G +K R KKRSESYSIYIYKVLKQVHPDTGISSKAMSIMNSFV DLFERIA EAAKL+SYN +KTLTSREIQTAVRLLLPGELAKHAVSEGTKAVTKYSSS
Sbjct: 74 GKSVPMAEKKVAKKGVAATSDKDGKDKKKRTKKRSESYSIYIYKVLKQVHPDTGISSKAMSIMNSFVNDLFERIAAEAAKLSSYNKSKTLTSREIQTAVRLLLPGELAKHAVSEGTKAVTKYSSS 198
BLAST of Gvermi12387.t1 vs. uniprot
Match: M2VZY7_GALSU (Histone H2B n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2VZY7_GALSU) HSP 1 Score: 173 bits (439), Expect = 8.360e-54 Identity = 98/124 (79.03%), Postives = 106/124 (85.48%), Query Frame = 0
Query: 2 PKGGGKSVPVAEKKVAKKGISGGGVEKTTRKKKRSESYSIYIYKVLKQVHPDTGISSKAMSIMNSFVADLFERIATEAAKLASYNNTKTLTSREIQTAVRLLLPGELAKHAVSEGTKAVTKYSS 125
PKG KSVPVA KK G EK KKKR+ESYSIYIYKVLKQVHPDTGISSKAMSIMNSFV D+FERIA+E++KLA+Y+ TKTLTSREIQTAVRLLLPGELAKHAVSEGTKAVTKY+S
Sbjct: 3 PKG-SKSVPVAGKKPI------GKAEKRKSKKKRAESYSIYIYKVLKQVHPDTGISSKAMSIMNSFVNDIFERIASESSKLAAYSKTKTLTSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTS 119
BLAST of Gvermi12387.t1 vs. uniprot
Match: A0A7S0XIQ2_9RHOD (Histone H2B n=2 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0XIQ2_9RHOD) HSP 1 Score: 174 bits (441), Expect = 1.340e-53 Identity = 96/124 (77.42%), Postives = 103/124 (83.06%), Query Frame = 0
Query: 2 PKGGGKSVPVAEKKVAKKGISGGGVEKTTRKKKRSESYSIYIYKVLKQVHPDTGISSKAMSIMNSFVADLFERIATEAAKLASYNNTKTLTSREIQTAVRLLLPGELAKHAVSEGTKAVTKYSS 125
PKG KS+P A GG +K +RKKKR ESYSIY+YKVLKQVHP+TGISSKAMSIMNSFV DLFERIA E+AKLA Y+ TKTLTSREIQTAVRLLLPGELAKHAVSEGTKAVTKYSS
Sbjct: 34 PKG-SKSLPAAXXXXXXXXXXGGDADKKSRKKKRVESYSIYVYKVLKQVHPETGISSKAMSIMNSFVNDLFERIAAESAKLAQYSKTKTLTSREIQTAVRLLLPGELAKHAVSEGTKAVTKYSS 156
BLAST of Gvermi12387.t1 vs. uniprot
Match: M2XSM4_GALSU (Histone H2B n=3 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XSM4_GALSU) HSP 1 Score: 170 bits (431), Expect = 1.380e-52 Identity = 96/125 (76.80%), Postives = 107/125 (85.60%), Query Frame = 0
Query: 2 PKGGGKSVPVAEKKVAKKGISGGGVEKTTRKKKRSESYSIYIYKVLKQVHPDTGISSKAMSIMNSFVADLFERIATEAAKLASYNNTKTLTSREIQTAVRLLLPGELAKHAVSEGTKAVTKYSSS 126
PKG KSVPVA KK K V++ KKKRSE+YSIYIYKVLKQVHPDTGIS KAMSIMNSFV D+FERIA+EA+KL++Y+ +KTLTSREIQTAVRLLLPGELAKHAVSEGTKAVTKY+SS
Sbjct: 3 PKG-AKSVPVAGKKPIPK------VDRKKSKKKRSETYSIYIYKVLKQVHPDTGISGKAMSIMNSFVNDIFERIASEASKLSAYSKSKTLTSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS 120
BLAST of Gvermi12387.t1 vs. uniprot
Match: M1V980_CYAM1 (Histone H2B n=2 Tax=Cyanidiaceae TaxID=265316 RepID=M1V980_CYAM1) HSP 1 Score: 166 bits (420), Expect = 6.150e-51 Identity = 93/113 (82.30%), Postives = 101/113 (89.38%), Query Frame = 0
Query: 14 KKVAKKGISGGGVEKTTRKKKRSESYSIYIYKVLKQVHPDTGISSKAMSIMNSFVADLFERIATEAAKLASYNNTKTLTSREIQTAVRLLLPGELAKHAVSEGTKAVTKYSSS 126
KKVAK S ++K +K+KR E+YSIYIYKVLKQVHPDTGISSKAMSIMNSFV DLFERIA+EA+KLA YN TKTLTSREIQTAVRLLLPGELAKHAVSEGTKAVTKY+SS
Sbjct: 10 KKVAKAPAS---IDK--KKRKRLETYSIYIYKVLKQVHPDTGISSKAMSIMNSFVNDLFERIASEASKLAQYNKTKTLTSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSS 117
BLAST of Gvermi12387.t1 vs. uniprot
Match: A0A5J4Z3W2_PORPP (Histone H2B n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z3W2_PORPP) HSP 1 Score: 166 bits (419), Expect = 1.060e-50 Identity = 97/125 (77.60%), Postives = 102/125 (81.60%), Query Frame = 0
Query: 2 PKGGGKSVPVAEKKVAKKGISGGGVEKTTRKKKRSESYSIYIYKVLKQVHPDTGISSKAMSIMNSFVADLFERIATEAAKLASYNNTKTLTSREIQTAVRLLLPGELAKHAVSEGTKAVTKYSSS 126
PKG KS+PVAEKK K + R+ESYSIYIYKVLKQVHPDTGISS AMSIMNSFV DLFERIA EAAKL+SY+ TKTLTSREIQTAVRLLLPGELAKHAVSEGTKAVTKYSSS
Sbjct: 3 PKG-TKSLPVAEKKP--KQVIKXXXXXXXXXXXRTESYSIYIYKVLKQVHPDTGISSNAMSIMNSFVTDLFERIAAEAAKLSSYSKTKTLTSREIQTAVRLLLPGELAKHAVSEGTKAVTKYSSS 124 The following BLAST results are available for this feature:
BLAST of Gvermi12387.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gvermi12387.t1 ID=Gvermi12387.t1|Name=Gvermi12387.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=127bpback to top |