Gvermi12149.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gvermi12149.t1
Unique Name	Gvermi12149.t1
Type	polypeptide
Organism	Gracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length	520

Homology

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BLAST of Gvermi12149.t1 vs. uniprot
Match: A0A2V3IMJ8_9FLOR (Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMJ8_9FLOR)

HSP 1 Score: 636 bits (1640), Expect = 7.460e-224
Identity = 329/516 (63.76%), Postives = 406/516 (78.68%), Query Frame = 0

Query:    1 MYSQIEDLRKSTPHRVENRALVQAVQRISRSLVRRAGLKYGDTPYAILLSEIWGQSQYATIEVLARKRQESGSRVRKPRDRSPKSVIAENLLETVSALSEEVVRNEDEQERAEQMKKLSAARDRLVRILKRVKDDTLSVNERRLTIQIIGRPGELDVDALRRLWGVPRVVFEVADLYHYFAKHGNQESIGGFYDTHLWGAQQDTRIFNILYWKESLRSDQVGKGCVCPSRRVRTITQGIIRKVVKLLLTRRRSPLFEKNIDTATEVVLYALHPDGHVVTFRESALKEAGFFQGLQAYEYSRSFTASLQNLHLAKLNRMLKDLGVVKQMESERRGGKEPVEFLSLCTLRRYCKERDTLTERALHAVVDRYIRREKCEMCNIDRLPISFGSFIRMYLALVGSSTDAGLKYWFSVLDQDGDGWISIGDVAHFYSERKSQSEKKNGIKLTNVQSLWVRLCAMSHVLPSGKGINLNSLKELGKEEREFVMCALLVRRADDGNLTDVAATIAESNGSKEGSI 516
            MYSQ +   +  P R ENRAL+ AV  IS +L++RAG+K GD  YA LLS+IWGQS  ATIE+LAR+R+E   R RK  + S + V  +    TVS L E+ + ++DE+ER  ++KKL+AARD+LVRIL+RVKDDTL+VNERRLT++II RPGEL+VDALRRLWGVP+VVFEVA LY YF  +  +  I  FYD H+W  + D R+FNIL+WKE+ +  Q GK     S   R+I+  IIRKVVKLLLT+RRSPLFE+N+D ATEVVLYALHPDGH+ +FRESALK AGFFQGL AYEYSRSFT SLQNLHLAKLNRMLKDL  VK++E+ER       +  SL TL +YC ERDTLT+RAL +V+DRY+RRE     N + L +S   F+R+YL+L GS+TD GLKYWFSVLDQD DGWIS+GDVA+FYSERK++SEK+NGIKL++V+ LWVRLCAMS V P+GKG++L +LKELGK+EREFVMCALL+RRADDGNLTDVAAT+AES+   +GS+
Sbjct:    1 MYSQAKSFPELHPIRFENRALLHAVSHISANLIKRAGVKSGDATYANLLSKIWGQSSVATIEILARRREECRIRKRKTPEFSKEDVRFKAKSGTVS-LFEQTMLSDDEKERIRKLKKLNAARDKLVRILRRVKDDTLAVNERRLTVEIINRPGELNVDALRRLWGVPKVVFEVAQLYEYFKSNVEERKICDFYDKHMWSNEPDARVFNILHWKEARQRQQSGKARDRYSSCFRSISHAIIRKVVKLLLTKRRSPLFERNMDVATEVVLYALHPDGHIDSFRESALKAAGFFQGLTAYEYSRSFTGSLQNLHLAKLNRMLKDLRAVKELEAERNNHNNLADGFSLQTLLQYCSERDTLTKRALFSVIDRYVRRENESESNRENLRVSHADFVRLYLSLTGSATDTGLKYWFSVLDQDSDGWISVGDVAYFYSERKAESEKRNGIKLSDVRCLWVRLCAMSRVSPNGKGLSLQALKELGKDEREFVMCALLIRRADDGNLTDVAATLAESDDGSDGSL 515

The following BLAST results are available for this feature:

BLAST of Gvermi12149.t1 vs. uniprot

BLAST of Gvermi12149.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IMJ8_9FLOR	7.460e-224	63.76	Serine/threonine-protein phosphatase 2A regulatory...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 88..135
None	No IPR available	GENE3D	1.10.238.10		coord: 336..492 e-value: 2.5E-15 score: 58.9
IPR018247	EF-Hand 1, calcium-binding site	PROSITE	PS00018	EF_HAND_1	coord: 414..426
IPR002048	EF-hand domain	PROSITE	PS50222	EF_HAND_2	coord: 401..436 score: 9.743292
IPR011992	EF-hand domain pair	SUPERFAMILY	47473	EF-hand	coord: 385..449

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
ScGOVlb_3404	contig	ScGOVlb_3404:3578883..3580442 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gvermi12149.t1	Gvermi12149.t1	Gracilaria vermiculophylla HapMaleFtJ_2017 male	mRNA	ScGOVlb_3404 3578883..3580442 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gvermi12149.t1 ID=Gvermi12149.t1|Name=Gvermi12149.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=520bp
MYSQIEDLRKSTPHRVENRALVQAVQRISRSLVRRAGLKYGDTPYAILLS
EIWGQSQYATIEVLARKRQESGSRVRKPRDRSPKSVIAENLLETVSALSE
EVVRNEDEQERAEQMKKLSAARDRLVRILKRVKDDTLSVNERRLTIQIIG
RPGELDVDALRRLWGVPRVVFEVADLYHYFAKHGNQESIGGFYDTHLWGA
QQDTRIFNILYWKESLRSDQVGKGCVCPSRRVRTITQGIIRKVVKLLLTR
RRSPLFEKNIDTATEVVLYALHPDGHVVTFRESALKEAGFFQGLQAYEYS
RSFTASLQNLHLAKLNRMLKDLGVVKQMESERRGGKEPVEFLSLCTLRRY
CKERDTLTERALHAVVDRYIRREKCEMCNIDRLPISFGSFIRMYLALVGS
STDAGLKYWFSVLDQDGDGWISIGDVAHFYSERKSQSEKKNGIKLTNVQS
LWVRLCAMSHVLPSGKGINLNSLKELGKEEREFVMCALLVRRADDGNLTD
VAATIAESNGSKEGSIDIN*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR018247	EF_Hand_1_Ca_BS
IPR002048	EF_hand_dom
IPR011992	EF-hand-dom_pair