Gvermi12102.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12102.t1
Unique NameGvermi12102.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length617
Homology
BLAST of Gvermi12102.t1 vs. uniprot
Match: A0A2V3J5H1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5H1_9FLOR)

HSP 1 Score: 577 bits (1487), Expect = 7.110e-197
Identity = 353/632 (55.85%), Postives = 435/632 (68.83%), Query Frame = 0
Query:    1 LPWQPSGTDPQQQSLELEFGGETLNENQTLSHYHIPEVYDHADGFLKTISDSGYLDPDKKVEALDKACAVVRGISRGEKDMERLIGAAFDDANDDTPASPSAQPSLRAMKRSRLSRIPSLNLGALNYLGPEGKPLTKLFSPSAPPTPRQLIRKLSIMRPDLYDSEAAVKATSSLSLRNIANLANNIPARPSESPNIGSGELKRGNTWFHEIMNSMNTSLRDPRKRAVHHETQEE----VEGDSEGENGLGTD---EGNVSGDRKDLPFE-GQTKIRLRSTQN--KMDSSSADVDENETTTAPINDMNVINETLIKPEGDTLTAAKSSTKDQDGSKPETDGGSSTTSVSKKDPEEA-EMKKSTRNQIDVSNTSIQTPPKQVTTSSESHSIVPSRPIVHQDKQVIGLTPERQA---SGEEVRQPRKRGRKRKNPHLTEEERKAQRQAQNRESAKLSRIRRKHLTMEYERRVNTLEGENENLRDTISGLEDRLQMLQNLLTITVQRRSIPQVHPSLIS-SATAAIGQGPQTRLNPTINPHIPMAGQPGAVSQAALVSRALNAQALMGNPNIMARTGAMPHTGMMHAQNVLSTQRP-VNANDSLAGHTQALSASRPLGSKAPSHSNPLTNFPYKNF 616
            LPWQ S +DPQQQSLELEFGGETLN+NQTLSHY+IPEVYDHADGFLKTISDSGYLD +KKVEALDKACAVVRGISRGEKDMERL+GA FDD +DDTP SPSAQPSLR+M+RSR SRIPSLN GALN +G  G+  ++LFSPSAPPTPRQL+RKLS++RPDLYD+ AA KATSSLSL    N+ N    R +ES + G+GELKRGNTWF +IM ++N+S RDPRKR   ++  ++    VEG+SEGEN    +   + N SG +     E G    +  S  N  K D +++    +  +    ND    NE     +  ++  AKSS            G S+ T+ ++  PE++ +++ +     D   T+ Q    Q   SS S  ++P RPI +QDKQVIGLTPERQ    + +E R PR+RGRKRKNPHL+EEERKAQ  AQNRESAKLSRIRRKH+T+EYERRVN+LEGENENLR TIS LEDRLQMLQNLLTI+VQRR+IPQVHPS++   + A +  G Q RL+  +  ++ +AGQ G      LV  ALNAQA++ N ++M R G   H GMM  Q   S+QRP +N N ++ G  Q L  S P+     S SNPL N  YK F
Sbjct:   56 LPWQLSDSDPQQQSLELEFGGETLNDNQTLSHYNIPEVYDHADGFLKTISDSGYLDHEKKVEALDKACAVVRGISRGEKDMERLLGAVFDDLHDDTPGSPSAQPSLRSMRRSRPSRIPSLNFGALNPIGVGGRSNSRLFSPSAPPTPRQLMRKLSLLRPDLYDTAAAEKATSSLSLAIPTNIGNKSAVRANESQSQGNGELKRGNTWFQDIMTTINSSHRDPRKRGDLNDDDQDHGDDVEGNSEGENSEDLEALTDPNASGAKSSTLVELGDILKQSTSPTNSIKTDGTASQPGTSLVSKPTQNDQLKFNE----QQQSSVDDAKSSAAPA--------GDSALTTKAQGGPEKSLKVEGALPTSTDGKGTTNQGSASQPPPSSNSTKVIPGRPIPNQDKQVIGLTPERQTPATASQEPRLPRRRGRKRKNPHLSEEERKAQXXAQNRESAKLSRIRRKHMTLEYERRVNSLEGENENLRGTISALEDRLQMLQNLLTISVQRRAIPQVHPSMMPPQSNAPMLPGGQNRLSAALGTNVSIAGQQG------LVPGALNAQAMLANQSVMGRAGISLHGGMMQTQVPGSSQRPPINTNGTMMGAPQTLPGSAPMRQSGSSQSNPLANLRYKTF 669          
BLAST of Gvermi12102.t1 vs. uniprot
Match: A0A7S1T822_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1T822_9RHOD)

HSP 1 Score: 79.7 bits (195), Expect = 4.600e-12
Identity = 42/86 (48.84%), Postives = 63/86 (73.26%), Query Frame = 0
Query:  406 RQPRKRGRKRKNPHLTEEERKAQRQAQNRESAKLSRIRRKHLTMEYERRVNTLEGENENLRDTISGLEDRLQMLQNLLTITVQRRS 491
            R PRKRGRKRK PHLTEEER+  R+ +NRESA+ SR R++++  +YE ++  +  EN++L   +S L +RL+ L+ +LT+ V+ RS
Sbjct:  386 RSPRKRGRKRKFPHLTEEERRTMRRDRNRESARRSRDRKRNIQKQYESKITAVRKENDSLEGQVSALSNRLEFLKQILTVHVRSRS 471          
BLAST of Gvermi12102.t1 vs. uniprot
Match: A0A1X6P6M8_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P6M8_PORUM)

HSP 1 Score: 78.2 bits (191), Expect = 2.730e-11
Identity = 47/98 (47.96%), Postives = 69/98 (70.41%), Query Frame = 0
Query:  406 RQPRKRGRKRKNPHLTEEERKAQRQAQNRESAKLSRIRRKHLTMEYERRVNTLEGENENLRDTISGLEDRLQMLQNLLTITVQRRSIPQVHPSLISSA 503
            R P+KRGRKRKNP LT+ +R   RQAQNR+SAK SR+RRK    +++R V+ L  EN +LR+T+  L  RL+ML+++LT +V   ++P   P+  ++A
Sbjct:  543 RVPKKRGRKRKNPELTDAQRIQVRQAQNRQSAKQSRLRRKAQAADHQRMVSELTNENSHLRETVGSLHARLKMLESILTESV---TLPGSGPAAAAAA 637          
BLAST of Gvermi12102.t1 vs. uniprot
Match: A0A2V3ITI3_9FLOR (BZIP domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITI3_9FLOR)

HSP 1 Score: 68.6 bits (166), Expect = 2.430e-10
Identity = 42/80 (52.50%), Postives = 54/80 (67.50%), Query Frame = 0
Query:  409 RKRGRKRKNPHLTEEERKAQRQAQNRESAKLSRIRRKHLTMEYERRVNTLEGENENLRDTISGLEDRLQMLQNLLTITVQ 488
            +KRGRK KNP LT+EER   R+ QN E AKLSR+RRK    EYE  +N L  EN  L+  +   E+RL  +Q+LLT++VQ
Sbjct:   30 KKRGRKCKNPELTDEERVLWRKQQNTEGAKLSRVRRKVNGAEYESNLNVLINENTMLKKQVDEHENRLACMQSLLTVSVQ 109          
BLAST of Gvermi12102.t1 vs. uniprot
Match: A0A7S0T7X4_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus madagascarensis TaxID=708628 RepID=A0A7S0T7X4_9RHOD)

HSP 1 Score: 65.9 bits (159), Expect = 5.180e-8
Identity = 37/84 (44.05%), Postives = 59/84 (70.24%), Query Frame = 0
Query:  404 EVRQPRKRGRKRKNPHLTEEERKAQRQAQNRESAKLSRIRRKHLTMEYERRVNTLEGENENLRDTISGLEDRLQMLQNLLTITV 487
            +++ P+KRGRKRKNP LT+ +R  +R+ QNR SAK SR ++K  T+E+ +R+ T+  EN++L+  +  L  RL ++Q LL + V
Sbjct:  222 DLKVPKKRGRKRKNPQLTDAQRMEERKMQNRASAKKSREKKKVQTVEHVQRIETILHENQSLKAELEHLGKRLDLMQQLLAVQV 305          
BLAST of Gvermi12102.t1 vs. uniprot
Match: R7Q767_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q767_CHOCR)

HSP 1 Score: 60.8 bits (146), Expect = 1.300e-7
Identity = 34/75 (45.33%), Postives = 43/75 (57.33%), Query Frame = 0
Query:   81 MERLIGAAFDDANDDTPASPSAQPSLRAMKRSRLSRIPSLNLGALNYLGPEGKPLTKLFSPSAPPTPRQLIRKLS 155
            MERLI + F+D   + P   +AQPS+R +KR   S+IPSLN   L    P         SP  PPTP QL+R+LS
Sbjct:    1 MERLIASVFNDDYPNAPPDDTAQPSIRTLKRKGRSKIPSLNFSHLPPPLPFDSSSKPSGSPRPPPTPNQLMRRLS 75          
BLAST of Gvermi12102.t1 vs. uniprot
Match: M2XXC4_GALSU (BZIP transcription factor isoform 1 n=2 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XXC4_GALSU)

HSP 1 Score: 63.9 bits (154), Expect = 4.740e-7
Identity = 116/476 (24.37%), Postives = 184/476 (38.66%), Query Frame = 0
Query:   15 LELEFGGETLNENQTLSHYHIPEVYDHADGFLKTISDSGYLDPDKKVEALDKACAVVRGISRGEKDMERLIGAAFDDANDDTPASPSAQPSLRAMKRSRLSRIPSLNLGALNYLGPEGKPLTKLFSPSAPPTPRQLIRKLSIMRPDLYDSEAAVKATSSLSLRNIAN----LANNIPARPSESPNI----GSGELKRGNTWFHEIMNSMN-TSLRD---PRKRAVHHETQEEVEGDSEGENGLGTDEGNVSGDRKDLPFEGQTKIRLRSTQNKMDSSSADVDENETTTAPINDMNVI----NETLIKPEGDTLTAAKSSTKDQDGSKPETDGGSSTTSVSKKDPEEAEMKKSTRNQIDVSNTSIQTPPKQVTTSSESHSIVPSRPIVHQDKQVIGLTPERQASGEEVRQPRKRGRKRKNPHLTEEERKAQRQAQNRESAKLSRIRRKHLTMEYERRVNTLEGENENLRDTISGLED 474
            L   FG   L +N+TL  Y IPE+Y+  +  L+ I + G LDP KK EAL++ C VV  +  G  D + L+     D       S   + + R    +R  +         N + P   P                 R  + +        +AV   S++S  N+      ++  +P    + PN           R   +F ++      +SLR    PR      +T            G   +E ++     D          L  +Q   D++   + E  +        NV+    NE   K      T A SS  D   +  +     S ++ S  D EE    KS   +   + ++        T S+ ++  +    I + +K              E R  ++RGRKRK+P +TEEERKA R  QNR SA+ SR R+K     Y++R+  L  EN+ LR T+  L++
Sbjct:   47 LHFHFGNIELQDNKTLYDYGIPEIYEQTESLLRMI-ELGGLDPQKKPEALERMCIVVESMKNGVTDPKELVSVVKRD-------SKITETNARTGNANRHEQSSCSKQAQSNVVQPPTSP-----------------RSFTSVTKQGNSQTSAVGFHSAVSSSNVDTKPSIISPKLPLERLDEPNTLVDNNDDLFARLTDYFPDLFTPKGLSSLRSGATPRAWTTPRDT------------GFHMEESSLVSSPVDWVTGTNDNHSLLGSQAIKDNAPNWIREFTSN------WNVLPQDRNEKSPKRRS-RQTEANSSVYDSFQNSGDEHENLSVSNDSSSDREELLECKS--GEYSTNQSTYSGSHSDNTNSNHNNPTLDDDHISNMEKH-------------ETRTVKRRGRKRKHPEMTEEERKAYRAMQNRRSAERSRQRKKIQQEAYQKRMEELCTENDELRSTVQALQE 463          
The following BLAST results are available for this feature:
BLAST of Gvermi12102.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A2V3J5H1_9FLOR7.110e-19755.85Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A7S1T822_9RHOD4.600e-1248.84Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A1X6P6M8_PORUM2.730e-1147.96Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A2V3ITI3_9FLOR2.430e-1052.50BZIP domain-containing protein n=1 Tax=Gracilariop... [more]
A0A7S0T7X4_9RHOD5.180e-844.05Hypothetical protein n=1 Tax=Erythrolobus madagasc... [more]
R7Q767_CHOCR1.300e-745.33Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
M2XXC4_GALSU4.740e-724.37BZIP transcription factor isoform 1 n=2 Tax=Galdie... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 448..482
NoneNo IPR availableGENE3D1.20.5.170coord: 410..485
e-value: 2.3E-9
score: 39.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 579..616
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 218..442
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 417..442
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 266..297
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 221..235
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 352..380
NoneNo IPR availableCDDcd14686bZIPcoord: 426..477
e-value: 5.24178E-9
score: 50.2365
NoneNo IPR availableSUPERFAMILY57959Leucine zipper domaincoord: 425..483
IPR004827Basic-leucine zipper domainSMARTSM00338brlzneucoord: 421..485
e-value: 1.9E-10
score: 50.7
IPR004827Basic-leucine zipper domainPFAMPF00170bZIP_1coord: 423..480
e-value: 9.8E-10
score: 38.4
IPR004827Basic-leucine zipper domainPROSITEPS50217BZIPcoord: 423..486
score: 10.978449

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_3404contigScGOVlb_3404:3416624..3418474 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12102.t1Gvermi12102.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_3404 3416624..3418474 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12102.t1 ID=Gvermi12102.t1|Name=Gvermi12102.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=617bp
LPWQPSGTDPQQQSLELEFGGETLNENQTLSHYHIPEVYDHADGFLKTIS
DSGYLDPDKKVEALDKACAVVRGISRGEKDMERLIGAAFDDANDDTPASP
SAQPSLRAMKRSRLSRIPSLNLGALNYLGPEGKPLTKLFSPSAPPTPRQL
IRKLSIMRPDLYDSEAAVKATSSLSLRNIANLANNIPARPSESPNIGSGE
LKRGNTWFHEIMNSMNTSLRDPRKRAVHHETQEEVEGDSEGENGLGTDEG
NVSGDRKDLPFEGQTKIRLRSTQNKMDSSSADVDENETTTAPINDMNVIN
ETLIKPEGDTLTAAKSSTKDQDGSKPETDGGSSTTSVSKKDPEEAEMKKS
TRNQIDVSNTSIQTPPKQVTTSSESHSIVPSRPIVHQDKQVIGLTPERQA
SGEEVRQPRKRGRKRKNPHLTEEERKAQRQAQNRESAKLSRIRRKHLTME
YERRVNTLEGENENLRDTISGLEDRLQMLQNLLTITVQRRSIPQVHPSLI
SSATAAIGQGPQTRLNPTINPHIPMAGQPGAVSQAALVSRALNAQALMGN
PNIMARTGAMPHTGMMHAQNVLSTQRPVNANDSLAGHTQALSASRPLGSK
APSHSNPLTNFPYKNF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004827bZIP