Gvermi13512.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi13512.t1
Unique NameGvermi13512.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length125
Homology
BLAST of Gvermi13512.t1 vs. uniprot
Match: B7G9W6_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G9W6_PHATC)

HSP 1 Score: 115 bits (288), Expect = 2.900e-28
Identity = 71/113 (62.83%), Postives = 84/113 (74.34%), Query Frame = 0
Query:   10 SSRIAAATMLRRAIAVGVTVNLAGLLCNLLAAEEIIGSLAIKVLTNRGAVFNGMMDSQLSSSSSVLQPLDILVVQANTNSLLSQFCSLVSLLYLTQRVAKLD-PPSTVDNPRQ 121
            ++R  AA M RRA+ VGVT+NL GLL  LLAAEEI+G+LAIKVLTNR     G   + L S    LQPLDILVVQANTN+LLS FCSLVSLLYL+ ++ +L  PPST + PRQ
Sbjct:  275 TTRSQAADMFRRAVRVGVTLNLIGLLVTLLAAEEIVGALAIKVLTNRNF---GPQAALLGSVEGQLQPLDILVVQANTNTLLSHFCSLVSLLYLSDKIRQLGLPPSTAEVPRQ 384          
BLAST of Gvermi13512.t1 vs. uniprot
Match: A0A7S3L7S8_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L7S8_9STRA)

HSP 1 Score: 106 bits (264), Expect = 3.440e-25
Identity = 63/120 (52.50%), Postives = 82/120 (68.33%), Query Frame = 0
Query:    1 MEPGSRGAFSSRIAAATMLRRAIAVGVTVNLAGLLCNLLAAEEIIGSLAIKVLTNRGAVFNGMMDSQLSSSSSVLQPLDILVVQANTNSLLSQFCSLVSLLYLTQRVAKLDPPSTVDNPR 120
            + P      +  I AA ++RRA+ V V++NL GL   LLAAEEI+GSLAIKVLT  G   + M ++ L      LQPLDILVVQANTNSL +QF SL + L+LT+++  LDPPST++ PR
Sbjct:  204 LRPTQLNTANQHIQAAKLVRRAVQVQVSINLLGLFGTLLAAEEIVGSLAIKVLTTFGVGASNMYNAPLMG----LQPLDILVVQANTNSLFAQFISLATSLFLTEQIRSLDPPSTLEEPR 319          
BLAST of Gvermi13512.t1 vs. uniprot
Match: A0A0P0YVA7_9STRA (Tic21 n=1 Tax=Nitzschia sp. IriIs04 TaxID=1444690 RepID=A0A0P0YVA7_9STRA)

HSP 1 Score: 105 bits (262), Expect = 7.650e-25
Identity = 57/104 (54.81%), Postives = 82/104 (78.85%), Query Frame = 0
Query:   11 SRIAAATMLRRAIAVGVTVNLAGLLCNLLAAEEIIGSLAIKVLTNRGAVFNGMMDSQLSSSSSVLQPLDILVVQANTNSLLSQFCSLVSLLYLTQRVAKLDPPS 114
            +RI  ATMLR++I VG T+N+ G+L  LL+AE+I+G LA+KVLT+   +        L+ S+S+LQPLD+++VQANTN+LLS FCSLV++LYL++ +A+LDPPS
Sbjct:  214 NRIKVATMLRKSIDVGATMNVVGMLFALLSAEQIVGVLAMKVLTSARTI-------ALTESNSLLQPLDVIIVQANTNTLLSHFCSLVAILYLSKSIARLDPPS 310          
BLAST of Gvermi13512.t1 vs. uniprot
Match: A0A1Z5KNL4_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KNL4_FISSO)

HSP 1 Score: 102 bits (254), Expect = 3.010e-24
Identity = 61/107 (57.01%), Postives = 79/107 (73.83%), Query Frame = 0
Query:   12 RIAAATMLRRAIAVGVTVNLAGLLCNLLAAEEIIGSLAIKVLTN---RGAVFNGMMDSQLSSSSSVLQPLDILVVQANTNSLLSQFCSLVSLLYLTQRVAKLDPPST 115
            R  AA MLRRA+ VGVT+NL GLL +LLAAEEI+G+LA++VLT+   R A+F             ++QPLDILVVQANTNSLLS FCSL SLL+ T+++ ++DPP +
Sbjct:  151 RAKAAHMLRRAVQVGVTINLVGLLVHLLAAEEIVGTLALQVLTSSSSRNAMF----------PEGLVQPLDILVVQANTNSLLSHFCSLASLLFYTKQIDQVDPPQS 247          
BLAST of Gvermi13512.t1 vs. uniprot
Match: A0A1Z5KLE4_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KLE4_FISSO)

HSP 1 Score: 101 bits (252), Expect = 6.710e-24
Identity = 60/107 (56.07%), Postives = 78/107 (72.90%), Query Frame = 0
Query:   12 RIAAATMLRRAIAVGVTVNLAGLLCNLLAAEEIIGSLAIKVLTN---RGAVFNGMMDSQLSSSSSVLQPLDILVVQANTNSLLSQFCSLVSLLYLTQRVAKLDPPST 115
            R  AA MLRRA+ VGVT+NL GLL +LLAAEEI+G+LA+ VLT+   R A+F             ++QPLD+LVVQANTNSLLS FCSL SLL+ T+++ ++DPP +
Sbjct:  160 RAKAAHMLRRAVQVGVTINLVGLLVHLLAAEEIVGTLALHVLTSSSSRNAMF----------PEGLVQPLDVLVVQANTNSLLSHFCSLASLLFYTKQIEQVDPPQS 256          
BLAST of Gvermi13512.t1 vs. uniprot
Match: A0A7S0GKD1_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GKD1_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 1.690e-23
Identity = 60/108 (55.56%), Postives = 78/108 (72.22%), Query Frame = 0
Query:   10 SSRIAAATMLRRAIAVGVTVNLAGLLCNLLAAEEIIGSLAIKVLTNRGAVFNGMMDSQLSSSSSVLQPLDILVVQANTNSLLSQFCSLVSLLYLTQRVAKLDPPSTVD 117
            ++RI AA +LRR I+VG+T+NL G+   LL AE+I+G LA KVLT +GA F+G       +S   +QPLDIL+VQANTN+LLS F S+V  LYLT+ V +LDPPS  D
Sbjct:  103 TTRIKAANLLRRNISVGLTLNLLGMFLTLLGAEQIVGMLAAKVLTQQGA-FSGGSAVLAGASVQSVQPLDILIVQANTNTLLSHFVSVVCGLYLTRFVDRLDPPSVSD 209          
BLAST of Gvermi13512.t1 vs. uniprot
Match: A0A448Z923_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z923_9STRA)

HSP 1 Score: 94.7 bits (234), Expect = 5.910e-21
Identity = 57/114 (50.00%), Postives = 78/114 (68.42%), Query Frame = 0
Query:   10 SSRIAAATMLRRAIAVGVTVNLAGLLCNLLAAEEIIGSLAIKVLT---NRGAVFNGMMDSQLSSSSSVLQPLDILVVQANTNSLLSQFCSLVSLLYLTQRVAKLDPPSTVDNPR 120
            +SRI AA MLR++I VG ++NL G+   L+ AE+I+G LAIKVLT   +  AV+      Q   + ++LQPLDILVVQANTN+L S FCS V+ L+L + + +LDPPS   + R
Sbjct:  192 TSRIQAANMLRKSITVGTSLNLMGMXVALMGAEQIVGGLAIKVLTTSTSASAVY------QAGQAVNLLQPLDILVVQANTNTLFSHFCSSVAYLFLARSIGQLDPPSVEGDER 299          
BLAST of Gvermi13512.t1 vs. uniprot
Match: A0A7S4AWV0_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AWV0_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 1.300e-20
Identity = 56/114 (49.12%), Postives = 78/114 (68.42%), Query Frame = 0
Query:   10 SSRIAAATMLRRAIAVGVTVNLAGLLCNLLAAEEIIGSLAIKVLTNRG---AVFNGMMDSQLSSSSSVLQPLDILVVQANTNSLLSQFCSLVSLLYLTQRVAKLDPPSTVDNPR 120
            ++R+ AA MLRR+I+VG ++NL G+   L  AE+I+G LAIKVLT      AV+      Q   + ++LQPLDILVVQANTN+L S FCS+V+ L+L + + +LDPPS   + R
Sbjct:  200 TTRVQAANMLRRSISVGCSLNLLGMAIALFGAEQIVGGLAIKVLTTSSGASAVY------QAGQAVNLLQPLDILVVQANTNTLFSHFCSIVAYLFLGRSIGQLDPPSVEGDER 307          
BLAST of Gvermi13512.t1 vs. uniprot
Match: B8BWA5_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BWA5_THAPS)

HSP 1 Score: 92.0 bits (227), Expect = 4.000e-20
Identity = 56/109 (51.38%), Postives = 75/109 (68.81%), Query Frame = 0
Query:   10 SSRIAAATMLRRAIAVGVTVNLAGLLCNLLAAEEIIGSLAIKVLTNRGAVFNGMMDSQLSSSSSVLQPLDILVVQANTNSLLSQFCSLVSLLYLTQRVAKLDPPSTVDN 118
            +SR+ AA +LRR I VGVT+NL GLL +LL A+ I+G+L  K + N    F G M   ++S +  LQPLD+LVVQANTN L S F S+  LL+LT+++  LDPPS  D+
Sbjct:  168 TSRVEAANLLRRVITVGVTINLIGLLTSLLGAQYIVGTLVAKAMQNVVG-FGGGMGGMVASQT--LQPLDVLVVQANTNILTSHFVSMACLLWLTRQIDLLDPPSLEDD 273          
BLAST of Gvermi13512.t1 vs. uniprot
Match: A0A7S2IJ58_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2IJ58_9STRA)

HSP 1 Score: 91.7 bits (226), Expect = 1.100e-19
Identity = 53/115 (46.09%), Postives = 79/115 (68.70%), Query Frame = 0
Query:    6 RGAFSSRIAAATMLRRAIAVGVTVNLAGLLCNLLAAEEIIGSLAIKVLTNRGAVFNGMMDSQLSSSSSVLQPLDILVVQANTNSLLSQFCSLVSLLYLTQRVAKLDPPSTVDNPR 120
            R A ++RI+AA M RRA+++ V +NL G+   +L AE+I+GSLA ++L+  G        SQ+++ +  +QPLD+LVVQANTN+LLS F SL   L L + +++LDPPST +  R
Sbjct:  204 RRAQTTRISAANMTRRAVSIAVAINLIGMFVTILGAEQIVGSLAARILSTSGLSPFAPPSSQMAAQT--IQPLDVLVVQANTNTLLSHFVSLACALSLKRFISRLDPPSTEERRR 316          
The following BLAST results are available for this feature:
BLAST of Gvermi13512.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
B7G9W6_PHATC2.900e-2862.83Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A7S3L7S8_9STRA3.440e-2552.50Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A0P0YVA7_9STRA7.650e-2554.81Tic21 n=1 Tax=Nitzschia sp. IriIs04 TaxID=1444690 ... [more]
A0A1Z5KNL4_FISSO3.010e-2457.01Uncharacterized protein n=1 Tax=Fistulifera solari... [more]
A0A1Z5KLE4_FISSO6.710e-2456.07Uncharacterized protein n=1 Tax=Fistulifera solari... [more]
A0A7S0GKD1_9STRA1.690e-2355.56Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A448Z923_9STRA5.910e-2150.00Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A7S4AWV0_9STRA1.300e-2049.12Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
B8BWA5_THAPS4.000e-2051.38Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A7S2IJ58_9STRA1.100e-1946.09Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022051Protein of unknown function DUF3611PFAMPF12263DUF3611coord: 18..107
e-value: 9.6E-19
score: 67.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_2424contigScGOVlb_2424:470..900 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi13512.t1Gvermi13512.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_2424 470..900 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi13512.t1 ID=Gvermi13512.t1|Name=Gvermi13512.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=125bp
MEPGSRGAFSSRIAAATMLRRAIAVGVTVNLAGLLCNLLAAEEIIGSLAI
KVLTNRGAVFNGMMDSQLSSSSSVLQPLDILVVQANTNSLLSQFCSLVSL
LYLTQRVAKLDPPSTVDNPRQQQQ*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022051DUF3611