Gvermi4291.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi4291.t1
Unique NameGvermi4291.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length116
Homology
BLAST of Gvermi4291.t1 vs. uniprot
Match: A0A8B8FMK9_9HEMI (Tubulin-specific chaperone A n=1 Tax=Sipha flava TaxID=143950 RepID=A0A8B8FMK9_9HEMI)

HSP 1 Score: 70.1 bits (170), Expect = 2.860e-13
Identity = 39/81 (48.15%), Postives = 52/81 (64.20%), Query Frame = 0
Query:    5 SHPSLRTLKIKTAVVLRIVKELDSYYDELEDNRKKVEQIRCSD-DHSKLKQMENVLGETQCMIPDTTTRLSNAVDDLSALL 84
            + P ++TLKIKT VV R+ KE   Y  E E  R+KVE+++ S  D S LK+ E VL E+Q MIPDT  RL  A  DL +++
Sbjct:    2 ADPRIKTLKIKTGVVKRLTKEKLMYIKETEQQREKVEKLKASGIDESNLKKQEEVLRESQMMIPDTQRRLKAAFQDLKSVI 82          
BLAST of Gvermi4291.t1 vs. uniprot
Match: A0A5E4MGM5_9HEMI (Tubulin-specific chaperone A n=1 Tax=Cinara cedri TaxID=506608 RepID=A0A5E4MGM5_9HEMI)

HSP 1 Score: 64.3 bits (155), Expect = 4.890e-11
Identity = 36/81 (44.44%), Postives = 52/81 (64.20%), Query Frame = 0
Query:    5 SHPSLRTLKIKTAVVLRIVKELDSYYDELEDNRKKVEQIRCS-DDHSKLKQMENVLGETQCMIPDTTTRLSNAVDDLSALL 84
            + P ++TLKIKT VV R+ KE   Y  E +   +KV++++ S  D S +K+ E VL E+Q MIPDT  RL  A DDL +++
Sbjct:    2 ADPRIKTLKIKTGVVKRLTKEKLMYIKETDQQLEKVKKLKESGSDESVIKKQEEVLRESQMMIPDTQRRLKAAFDDLKSVI 82          
BLAST of Gvermi4291.t1 vs. uniprot
Match: A0A1Y2BZ78_9FUNG (Tubulin-specific chaperone A n=1 Tax=Rhizoclosmatium globosum TaxID=329046 RepID=A0A1Y2BZ78_9FUNG)

HSP 1 Score: 64.3 bits (155), Expect = 5.380e-11
Identity = 48/109 (44.04%), Postives = 67/109 (61.47%), Query Frame = 0
Query:    8 SLRTLKIKTAVVLRIVKELDSYYDELEDNRKKVEQIRCS--DDHSKLKQMENVLGETQCMIPDTTTRLSNAVDDLSALL-DQPSTRSDLAGTQELESAIAAVSKASQKL 113
            S RTLKIKT VV R+VKEL SY  E    +++++++  +  DDH+  KQ E VL ET  MIPD   RL  A DDL  L+ D  ++ +D A ++EL +A  A++    KL
Sbjct:    5 SSRTLKIKTGVVTRLVKELGSYEKEAVKQQERIDKLVAANEDDHTVRKQKE-VLEETTTMIPDCKNRLLAAKDDLQKLVADILASSADAAESEELIAAQEAINAIPLKL 112          
BLAST of Gvermi4291.t1 vs. uniprot
Match: A0A8D8VDI2_9HEMI (Tubulin-specific chaperone A n=1 Tax=Cacopsylla melanoneura TaxID=428564 RepID=A0A8D8VDI2_9HEMI)

HSP 1 Score: 63.5 bits (153), Expect = 1.230e-10
Identity = 38/112 (33.93%), Postives = 70/112 (62.50%), Query Frame = 0
Query:    5 SHPSLRTLKIKTAVVLRIVKELDSYYDELEDNRKKVEQIRC--SDDHSKLKQMENVLGETQCMIPDTTTRLSNAVDDLSALLDQPSTRSDLAGTQELESAIAAVSKASQKLQ 114
            + P ++TLKIKT V+ RI KE  +Y  E+     + E+++   SD+H  LK+ + V+ E+Q M+P+   R+  A +DL ++L+      DLAGT++ + A   V++A+++++
Sbjct:    2 ADPRIKTLKIKTGVLKRITKEKTTYIKEVGIEEARYEKLKAGGSDEHV-LKKQQEVIQESQMMVPECHRRIVRAYEDLKSILES---EQDLAGTEDYKLAAQIVAEAAKEIE 109          
BLAST of Gvermi4291.t1 vs. uniprot
Match: A0A0K3CQY8_RHOTO (Tubulin-specific chaperone A n=4 Tax=Rhodosporidium toruloides TaxID=5286 RepID=A0A0K3CQY8_RHOTO)

HSP 1 Score: 63.2 bits (152), Expect = 1.350e-10
Identity = 42/98 (42.86%), Postives = 59/98 (60.20%), Query Frame = 0
Query:   10 RTLKIKTAVVLRIVKELDSYYDELEDNRKKVEQIRCS-DDHSKLKQMENVLGETQCMIPDTTTRLSNAVDDLSALLDQPSTRSDLAGTQELESAIAAV 106
            R L IKT VV R VKEL SY +E  + +K+ + +  + +D  +++Q   V  E+Q MIPDT  RL+ AV DL  L+   ST  +LA T E + A AA+
Sbjct:    6 RQLAIKTGVVNRTVKELQSYREEAVELKKRADAMEAAGEDEYEVRQQRKVQAESQQMIPDTEKRLAKAVADLEELM--ASTEDELAETDEFKKAEAAL 101          
BLAST of Gvermi4291.t1 vs. uniprot
Match: A0A6G0YRY6_APHCR (Tubulin-specific chaperone A n=6 Tax=Aphidinae TaxID=133076 RepID=A0A6G0YRY6_APHCR)

HSP 1 Score: 62.8 bits (151), Expect = 1.990e-10
Identity = 35/81 (43.21%), Postives = 50/81 (61.73%), Query Frame = 0
Query:    5 SHPSLRTLKIKTAVVLRIVKELDSYYDELEDNRKKVEQIR-CSDDHSKLKQMENVLGETQCMIPDTTTRLSNAVDDLSALL 84
            + P ++TLKIKT VV R+ KE   Y  E E   +KV++++    D S  K+ E VL E+Q MIPDT  RL  A +DL +++
Sbjct:    2 ADPRIKTLKIKTGVVKRLTKEKLMYIQETEQQLEKVQKLKEAGIDESTFKKQEEVLRESQMMIPDTQRRLKAAFEDLKSVV 82          
BLAST of Gvermi4291.t1 vs. uniprot
Match: A0A507E2G4_9FUNG (Tubulin-specific chaperone A n=2 Tax=Chytriomyces confervae TaxID=246404 RepID=A0A507E2G4_9FUNG)

HSP 1 Score: 60.8 bits (146), Expect = 1.200e-9
Identity = 40/79 (50.63%), Postives = 49/79 (62.03%), Query Frame = 0
Query:    8 SLRTLKIKTAVVLRIVKELDSYYDELEDNRKKVEQIRCS--DDHSKLKQMENVLGETQCMIPDTTTRLSNAVDDLSALL 84
            S RTLKIKT VV R+VKEL SY  E    +K+++ +  +  DDH   KQ E VL ET  MIPD   RLS A D+L  L+
Sbjct:    5 SARTLKIKTGVVTRLVKELSSYEREEITQQKRIDALITANADDHDVRKQRE-VLEETTTMIPDCKNRLSAARDELQRLV 82          
BLAST of Gvermi4291.t1 vs. uniprot
Match: U5H2S2_USTV1 (Tubulin-specific chaperone A n=4 Tax=Microbotryum TaxID=34416 RepID=U5H2S2_USTV1)

HSP 1 Score: 58.5 bits (140), Expect = 1.060e-8
Identity = 38/98 (38.78%), Postives = 61/98 (62.24%), Query Frame = 0
Query:   10 RTLKIKTAVVLRIVKELDSYYDELEDNRKKVEQI-RCSDDHSKLKQMENVLGETQCMIPDTTTRLSNAVDDLSALLDQPSTRSDLAGTQELESAIAAV 106
            R L IKT VV R+VKEL SY  E      +VE++ + ++D ++++Q + V  E+  MIPD+  RL+ AV +L  L++  ++  + +G +ELE A  AV
Sbjct:   12 RQLVIKTGVVNRVVKELQSYKSEAVTMASRVEKMEQNNEDEAEIRQQKRVHAESLAMIPDSEQRLAKAVAELEDLIE--ASEEETSGAEELEKAKQAV 107          
BLAST of Gvermi4291.t1 vs. uniprot
Match: A0A7J7IM73_9RHOD (Tubulin-specific chaperone A n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IM73_9RHOD)

HSP 1 Score: 57.0 bits (136), Expect = 3.660e-8
Identity = 35/93 (37.63%), Postives = 56/93 (60.22%), Query Frame = 0
Query:   10 RTLKIKTAVVLRIVKELDSYYDELEDNRKKVEQIRCSDDHSKLKQMENVLGETQCMIPDTTTRLSNAVDDLSALLDQPSTRSDLAGTQELESA 102
            + LKIKT+VVLR  K+L+ Y+ E E  + K  +    +    L+Q+++V+ ET+ MIPD   RL  AV++L   L++ +  + L+GT   E A
Sbjct:    7 KELKIKTSVVLRTAKDLEYYFRESELLKAKYRESN-EEQRGSLRQLQDVIAETELMIPDAQLRLQRAVNELEESLEKAND-AGLSGTDSAERA 97          
BLAST of Gvermi4291.t1 vs. uniprot
Match: A0A1X2IQM4_9FUNG (Tubulin-specific chaperone A n=1 Tax=Absidia repens TaxID=90262 RepID=A0A1X2IQM4_9FUNG)

HSP 1 Score: 55.5 bits (132), Expect = 1.270e-7
Identity = 37/96 (38.54%), Postives = 55/96 (57.29%), Query Frame = 0
Query:    8 SLRTLKIKTAVVLRIVKELDSYYDELEDNRKKVEQIRCSD-DHSKLKQMENVLGETQCMIPDTTTRLSNAVDDLSALLDQPSTRSDLAGTQELESA 102
            +L+ LKIKT VV+RI KE  +Y  E E  +K+++++     D + +++ + VL ET  MIPD   RL+ A  DL    D P       GT+EL+ A
Sbjct:    2 TLKELKIKTNVVVRINKEQAAYGKEAETQQKRIDKLIAEGADEADVRKQKEVLDETFQMIPDVKKRLAVAYKDLQDKADDP----QYEGTEELQQA 93          
The following BLAST results are available for this feature:
BLAST of Gvermi4291.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
A0A8B8FMK9_9HEMI2.860e-1348.15Tubulin-specific chaperone A n=1 Tax=Sipha flava T... [more]
A0A5E4MGM5_9HEMI4.890e-1144.44Tubulin-specific chaperone A n=1 Tax=Cinara cedri ... [more]
A0A1Y2BZ78_9FUNG5.380e-1144.04Tubulin-specific chaperone A n=1 Tax=Rhizoclosmati... [more]
A0A8D8VDI2_9HEMI1.230e-1033.93Tubulin-specific chaperone A n=1 Tax=Cacopsylla me... [more]
A0A0K3CQY8_RHOTO1.350e-1042.86Tubulin-specific chaperone A n=4 Tax=Rhodosporidiu... [more]
A0A6G0YRY6_APHCR1.990e-1043.21Tubulin-specific chaperone A n=6 Tax=Aphidinae Tax... [more]
A0A507E2G4_9FUNG1.200e-950.63Tubulin-specific chaperone A n=2 Tax=Chytriomyces ... [more]
U5H2S2_USTV11.060e-838.78Tubulin-specific chaperone A n=4 Tax=Microbotryum ... [more]
A0A7J7IM73_9RHOD3.660e-837.63Tubulin-specific chaperone A n=1 Tax=Cyanidiococcu... [more]
A0A1X2IQM4_9FUNG1.270e-738.54Tubulin-specific chaperone A n=1 Tax=Absidia repen... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 23..43
NoneNo IPR availableGENE3D1.20.58.90coord: 5..114
e-value: 8.9E-27
score: 95.4
NoneNo IPR availablePANTHERPTHR21500:SF0TUBULIN-SPECIFIC CHAPERONE Acoord: 9..108
IPR004226Tubulin binding cofactor APFAMPF02970TBCAcoord: 8..105
e-value: 2.9E-23
score: 82.0
IPR004226Tubulin binding cofactor APANTHERPTHR21500TUBULIN-SPECIFIC CHAPERONE Acoord: 9..108
IPR036126Tubulin binding cofactor A superfamilySUPERFAMILY46988Tubulin chaperone cofactor Acoord: 7..109

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_147contigScGOVlb_147:1061696..1062311 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi4291.t1Gvermi4291.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_147 1061696..1062311 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi4291.t1 ID=Gvermi4291.t1|Name=Gvermi4291.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=116bp
MSSASHPSLRTLKIKTAVVLRIVKELDSYYDELEDNRKKVEQIRCSDDHS
KLKQMENVLGETQCMIPDTTTRLSNAVDDLSALLDQPSTRSDLAGTQELE
SAIAAVSKASQKLQA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004226TBCA
IPR036126TBCA_sf