Gvermi6951.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6951.t1
Unique NameGvermi6951.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length216
Homology
BLAST of Gvermi6951.t1 vs. uniprot
Match: A0A2V3INQ9_9FLOR (Ras-related protein Rab-13 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3INQ9_9FLOR)

HSP 1 Score: 296 bits (759), Expect = 6.480e-100
Identity = 144/185 (77.84%), Postives = 165/185 (89.19%), Query Frame = 0
Query:    1 MTNIEMPAPASVEYHYLYKLLLIGDSGVGKSCVLTRFADSTYEECQTSTIGVDFKIRTIGIEDKSVKLQIWDSAGQERFRTIAAAYYRGAHGVGIVFDITDEKSFQSVEGSWIEEVENNTTSPVRMLLIGNKCDLEEEREVTKEEAEALAKKYDMSYVETSAKTAENVYEAFATISKEIYDSNSV 185
            MT+++     SVEYHYLYKLLLIGDSGVGKSC+LTRFADS Y +CQTSTIGVDFKIRTI IEDK VKLQIWDSAGQERFRTIAAAYYRGAHGVGIVFDITDEKSF SVE SW+EE+ENNT+S +R LLIGNKCDLE +REV +++AE+LA+KY M Y+ETSAKTAENV+EAF TISK+I+++  V
Sbjct:    1 MTDVQTQVQPSVEYHYLYKLLLIGDSGVGKSCILTRFADSVYADCQTSTIGVDFKIRTIEIEDKRVKLQIWDSAGQERFRTIAAAYYRGAHGVGIVFDITDEKSFLSVENSWLEEIENNTSSSIRTLLIGNKCDLESQREVRRDDAESLARKYGMRYIETSAKTAENVFEAFVTISKDIHENKYV 185          
BLAST of Gvermi6951.t1 vs. uniprot
Match: A0A5J4YYU9_PORPP (Ras-related protein ORAB-1 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YYU9_PORPP)

HSP 1 Score: 211 bits (536), Expect = 6.050e-66
Identity = 107/170 (62.94%), Postives = 133/170 (78.24%), Query Frame = 0
Query:   13 EYHYLYKLLLIGDSGVGKSCVLTRFADSTYEECQTSTIGVDFKIRTIGIEDKSVKLQIWDSAGQERFRTIAAAYYRGAHGVGIVFDITDEKSFQSVEGSWIEEVENNTTSPVRMLLIGNKCDLEEEREVTKEEAEALAKKYDMSYVETSAKTAENVYEAFATISKEIYDS 182
            EY YL+KLL+IGDSGVGKS +L RFAD+TY E   STIGVDFKIRTI ++DK++KLQIWD+AGQERFRTIAAAYYRGAHG+ I +DITD KSF++V+ SW++E+    +  V  LL+GNKCDL  +R V  EE + LA    M ++ETSAKTAENV  AF T+++EI  S
Sbjct:    5 EYDYLFKLLVIGDSGVGKSNLLLRFADNTYTESHISTIGVDFKIRTIDLDDKTIKLQIWDTAGQERFRTIAAAYYRGAHGIVITYDITDRKSFENVK-SWMDEIGKYGSERVNKLLVGNKCDLVNKRAVETEEGQELADALGMKFLETSAKTAENVQLAFTTMTREIMSS 173          
BLAST of Gvermi6951.t1 vs. uniprot
Match: A0A1Q3FY52_CULTA (Putative ras-related protein rab-8a n=1 Tax=Culex tarsalis TaxID=7177 RepID=A0A1Q3FY52_CULTA)

HSP 1 Score: 209 bits (532), Expect = 3.060e-65
Identity = 101/169 (59.76%), Postives = 134/169 (79.29%), Query Frame = 0
Query:   11 SVEYHYLYKLLLIGDSGVGKSCVLTRFADSTYEECQTSTIGVDFKIRTIGIEDKSVKLQIWDSAGQERFRTIAAAYYRGAHGVGIVFDITDEKSFQSVEGSWIEEVENNTTSPVRMLLIGNKCDLEEEREVTKEEAEALAKKYDMSYVETSAKTAENVYEAFATISKEI 179
            S EY YL+KLLLIGDSGVGKSC+L RFAD TY E   STIGVDFKIRTI ++ K +KLQIWD+AGQERFRTI  AYYRGA G+ +V+DIT EKSF++++ +WI  +E N ++ V  +L+GNKC+L E+R+VT++  E LA +Y + ++ETSAK + NV EAF T++++I
Sbjct:    2 SPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITQEKSFENIK-NWIRNIEENASADVEKMLLGNKCELNEKRQVTRDRGEQLAVEYGIKFMETSAKASINVDEAFFTLARDI 169          
BLAST of Gvermi6951.t1 vs. uniprot
Match: A0A165H2A7_9APHY (GTP-binding protein ypt1 n=1 Tax=Laetiporus sulphureus 93-53 TaxID=1314785 RepID=A0A165H2A7_9APHY)

HSP 1 Score: 206 bits (524), Expect = 4.400e-64
Identity = 104/169 (61.54%), Postives = 133/169 (78.70%), Query Frame = 0
Query:   14 YHYLYKLLLIGDSGVGKSCVLTRFADSTYEECQTSTIGVDFKIRTIGIEDKSVKLQIWDSAGQERFRTIAAAYYRGAHGVGIVFDITDEKSFQSVEGSWIEEVENNTTSPVRMLLIGNKCDLEEEREVTKEEAEALAKKYDMSYVETSAKTAENVYEAFATISKEIYDS 182
            Y YL+KLLLIGDSGVGKSC+L RFA+  + +   STIGVDFKIRTI  E K++KLQIWD+AGQERFRTIAAAYYRGAHG+ +V+D+TD +SFQ+V+G W++E+E   +  V+ LLIGNK DL E R V  + A+  A + ++ +VETSAKT+ NV EAF T+SK+I DS
Sbjct:    5 YDYLFKLLLIGDSGVGKSCLLLRFAEDAFTDSYLSTIGVDFKIRTIDFEGKTIKLQIWDTAGQERFRTIAAAYYRGAHGIIVVYDVTDGESFQNVKG-WLQEIERYGSETVKKLLIGNKSDLAERRVVEYDAAKEFADQLEIPFVETSAKTSTNVEEAFLTMSKQIKDS 172          
BLAST of Gvermi6951.t1 vs. uniprot
Match: Q5CWY7_CRYPI (RAS small GTpases RIC1/ypt1 n=8 Tax=Cryptosporidium TaxID=5806 RepID=Q5CWY7_CRYPI)

HSP 1 Score: 205 bits (522), Expect = 8.560e-64
Identity = 103/174 (59.20%), Postives = 130/174 (74.71%), Query Frame = 0
Query:   13 EYHYLYKLLLIGDSGVGKSCVLTRFADSTYEECQTSTIGVDFKIRTIGIEDKSVKLQIWDSAGQERFRTIAAAYYRGAHGVGIVFDITDEKSFQSVEGSWIEEVENNTTSPVRMLLIGNKCDLEEEREVTKEEAEALAKKYDMSYVETSAKTAENVYEAFATISKEIYDSNSVN 186
            EY YL+KLLLIGDSGVGKSC+L RFAD TY +   STIGVDFKIRTI +E+K+VKLQIWD+AGQERFRTI ++YYRGAHG+ IV+D+TD  SF +V+  WI+E++      V  LL+GNKCDL  +R VT +E   LA  + + ++ETSAK A NV +AF T++ EI     VN
Sbjct:    4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTISLENKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDRDSFDNVK-QWIQEIDRYAMENVNKLLVGNKCDLVSKRVVTSDEGRELADSHGIKFIETSAKNAYNVEQAFHTMAGEIKKRVQVN 176          
BLAST of Gvermi6951.t1 vs. uniprot
Match: A0A8I6RNA1_CIMLE (Uncharacterized protein n=1 Tax=Cimex lectularius TaxID=79782 RepID=A0A8I6RNA1_CIMLE)

HSP 1 Score: 205 bits (521), Expect = 1.180e-63
Identity = 103/201 (51.24%), Postives = 141/201 (70.15%), Query Frame = 0
Query:   13 EYHYLYKLLLIGDSGVGKSCVLTRFADSTYEECQTSTIGVDFKIRTIGIEDKSVKLQIWDSAGQERFRTIAAAYYRGAHGVGIVFDITDEKSFQSVEGSWIEEVENNTTSPVRMLLIGNKCDLEEEREVTKEEAEALAKKYDMSYVETSAKTAENVYEAFATISKEIYDSNSVNGIESLAQQMEAIRVIDGTRFYDKKPKC 213
            EY YL+KLLLIGDSGVGKSC+L RFAD TY E   STIGVDFKIRT+ ++ K++KLQIWD+AGQERFRTI ++YYRGAHG+ +V+D TDE+SF +++  W+EE++      V  LL+GNKCDL  ++ V    A+  A +  + ++ETSAK A NV +AF T++ EI   N V    S  +   ++++ DG R+  +K  C
Sbjct:    4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYSESYISTIGVDFKIRTVDLDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDCTDEESFANLK-QWLEEIDRYACDSVNKLLVGNKCDLTAKKVVDYATAKEYADQLKIPFIETSAKNALNVEQAFITMAAEI--KNRVGPPSSAPENQPSLKIEDGKRYTQEKSGC 201          
BLAST of Gvermi6951.t1 vs. uniprot
Match: A0A7S2SPR3_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SPR3_9STRA)

HSP 1 Score: 204 bits (519), Expect = 2.360e-63
Identity = 100/167 (59.88%), Postives = 131/167 (78.44%), Query Frame = 0
Query:   13 EYHYLYKLLLIGDSGVGKSCVLTRFADSTYEECQTSTIGVDFKIRTIGIEDKSVKLQIWDSAGQERFRTIAAAYYRGAHGVGIVFDITDEKSFQSVEGSWIEEVENNTTSPVRMLLIGNKCDLEEEREVTKEEAEALAKKYDMSYVETSAKTAENVYEAFATISKEI 179
            EY YL+KLLLIGDSGVGKSC+L RFAD TY E   STIGVDFKIRTI ++ K++KLQIWD+AGQERFRTI ++YYRGAHG+ IV+D+TDE+SFQ+V+  W++E++      V  LL+GNK DL  +R+V+ E A+  A + DM ++ETSAK A NV +AF  ++K+I
Sbjct:    5 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDEESFQNVK-QWLQEIDRYACEKVNTLLVGNKSDLTTKRQVSYEAAKEFADQNDMEFIETSAKNATNVEKAFMAMAKQI 170          
BLAST of Gvermi6951.t1 vs. uniprot
Match: Q17B74_AEDAE (AAEL005069-PA n=12 Tax=Diptera TaxID=7147 RepID=Q17B74_AEDAE)

HSP 1 Score: 204 bits (519), Expect = 2.680e-63
Identity = 108/203 (53.20%), Postives = 143/203 (70.44%), Query Frame = 0
Query:   11 SVEYHYLYKLLLIGDSGVGKSCVLTRFADSTYEECQTSTIGVDFKIRTIGIEDKSVKLQIWDSAGQERFRTIAAAYYRGAHGVGIVFDITDEKSFQSVEGSWIEEVENNTTSPVRMLLIGNKCDLEEEREVTKEEAEALAKKYDMSYVETSAKTAENVYEAFATISKEIYDSNSVNGIESLAQQMEAIRVIDGTRFYDKKPKC 213
            S EY YL+KLLLIGDSGVGKSC+L RFAD TY E   STIGVDFKIRTI ++ K++KLQIWD+AGQERFRTI ++YYRGAHG+ +V+D TD++SF +V+ +W+EE+E      V  LL+GNKCDL+ ++ V    A   A +  + ++ETSAK A NV +AF T++ EI   N V    S A+   A++ ID +R  + K  C
Sbjct:    7 SPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVK-TWLEEIERYACENVNKLLVGNKCDLQTKKVVDTTTAMEYANQLGIPFLETSAKNATNVEQAFMTMAAEI--KNRVGPPSSAAEAPSAVK-IDKSRSVESKSGC 205          
BLAST of Gvermi6951.t1 vs. uniprot
Match: A0A7S0LGU1_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LGU1_9EUKA)

HSP 1 Score: 204 bits (520), Expect = 3.050e-63
Identity = 102/179 (56.98%), Postives = 135/179 (75.42%), Query Frame = 0
Query:    1 MTNIEMPAPASVEYHYLYKLLLIGDSGVGKSCVLTRFADSTYEECQTSTIGVDFKIRTIGIEDKSVKLQIWDSAGQERFRTIAAAYYRGAHGVGIVFDITDEKSFQSVEGSWIEEVENNTTSPVRMLLIGNKCDLEEEREVTKEEAEALAKKYDMSYVETSAKTAENVYEAFATISKEI 179
            M NI     A+ EY YL+KLLLIGDSGVGKSC+L RFAD TY E   STIGVDFKIRTI ++ K++KLQIWD+AGQERFRTI ++YYRGAHG+ +V+D+TD +SF +V+  W+ E+E   +  V  LL+GNKCDL  +++V  ++A+A A   D+ ++ETSAK A NV +AF T++ EI
Sbjct:   16 MANIA----AATEYDYLFKLLLIGDSGVGKSCLLLRFADHTYTESYISTIGVDFKIRTIDLDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDLESFNNVK-QWLSEIERYASENVNKLLVGNKCDLSNKKQVEYDQAKAFADNLDIPFLETSAKNATNVEKAFLTMAAEI 189          
BLAST of Gvermi6951.t1 vs. uniprot
Match: A0A6U1KLQ8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A6U1KLQ8_9STRA)

HSP 1 Score: 203 bits (517), Expect = 4.600e-63
Identity = 99/167 (59.28%), Postives = 130/167 (77.84%), Query Frame = 0
Query:   13 EYHYLYKLLLIGDSGVGKSCVLTRFADSTYEECQTSTIGVDFKIRTIGIEDKSVKLQIWDSAGQERFRTIAAAYYRGAHGVGIVFDITDEKSFQSVEGSWIEEVENNTTSPVRMLLIGNKCDLEEEREVTKEEAEALAKKYDMSYVETSAKTAENVYEAFATISKEI 179
            EY YL+KLLLIGDSGVGKSC+L RFAD TY E   STIGVDFKIRTI ++ K++KLQIWD+AGQERFRTI ++YYRGAHG+ +VFD+TD++SF +V+  W+ E++    + V+ LL+GNKCDL  +R V  E+A   A+   + Y+ETSAK+A NV +AF T++ EI
Sbjct:    4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVFDVTDQESFNNVK-QWLHEIDRYACANVKKLLVGNKCDLASKRAVPTEQAAEFAESLGVEYLETSAKSALNVEKAFTTMASEI 169          
The following BLAST results are available for this feature:
BLAST of Gvermi6951.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3INQ9_9FLOR6.480e-10077.84Ras-related protein Rab-13 n=1 Tax=Gracilariopsis ... [more]
A0A5J4YYU9_PORPP6.050e-6662.94Ras-related protein ORAB-1 n=1 Tax=Porphyridium pu... [more]
A0A1Q3FY52_CULTA3.060e-6559.76Putative ras-related protein rab-8a n=1 Tax=Culex ... [more]
A0A165H2A7_9APHY4.400e-6461.54GTP-binding protein ypt1 n=1 Tax=Laetiporus sulphu... [more]
Q5CWY7_CRYPI8.560e-6459.20RAS small GTpases RIC1/ypt1 n=8 Tax=Cryptosporidiu... [more]
A0A8I6RNA1_CIMLE1.180e-6351.24Uncharacterized protein n=1 Tax=Cimex lectularius ... [more]
A0A7S2SPR3_9STRA2.360e-6359.88Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
Q17B74_AEDAE2.680e-6353.20AAEL005069-PA n=12 Tax=Diptera TaxID=7147 RepID=Q1... [more]
A0A7S0LGU1_9EUKA3.050e-6356.98Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
A0A6U1KLQ8_9STRA4.600e-6359.28Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 18..39
score: 51.6
coord: 59..81
score: 48.79
coord: 41..57
score: 29.66
coord: 122..135
score: 47.55
coord: 157..179
score: 43.74
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 18..182
e-value: 2.6E-90
score: 316.0
NoneNo IPR availableSMARTSM00177arf_sub_2coord: 1..183
e-value: 0.002
score: 4.0
NoneNo IPR availableSMARTSM00176ran_sub_2coord: 23..213
e-value: 0.001
score: 4.4
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 15..182
e-value: 3.9E-31
score: 119.4
NoneNo IPR availablePANTHERPTHR47977:SF6RAS-RELATED PROTEIN RABD2A-LIKEcoord: 15..182
NoneNo IPR availablePANTHERPTHR47977LD21953P-RELATEDcoord: 15..182
NoneNo IPR availablePROSITEPS51420RHOcoord: 11..180
score: 9.24585
NoneNo IPR availablePROSITEPS51419RABcoord: 13..213
score: 34.481441
IPR001806Small GTPaseSMARTSM00174rho_sub_3coord: 20..177
e-value: 6.2E-11
score: 20.6
IPR001806Small GTPasePFAMPF00071Rascoord: 19..180
e-value: 8.1E-60
score: 201.1
IPR001806Small GTPasePROSITEPS51421RAScoord: 10..215
score: 19.282637
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 9..204
e-value: 1.2E-66
score: 225.8
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 13..183
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 17..175
e-value: 4.0E-27
score: 93.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24229contigScGOVlb_24229:729142..729887 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6951.t1Gvermi6951.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24229 729142..729887 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6951.t1 ID=Gvermi6951.t1|Name=Gvermi6951.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=216bp
MTNIEMPAPASVEYHYLYKLLLIGDSGVGKSCVLTRFADSTYEECQTSTI
GVDFKIRTIGIEDKSVKLQIWDSAGQERFRTIAAAYYRGAHGVGIVFDIT
DEKSFQSVEGSWIEEVENNTTSPVRMLLIGNKCDLEEEREVTKEEAEALA
KKYDMSYVETSAKTAENVYEAFATISKEIYDSNSVNGIESLAQQMEAIRV
IDGTRFYDKKPKCGC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR027417P-loop_NTPase
IPR005225Small_GTP-bd_dom