Gvermi8006.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi8006.t1
Unique NameGvermi8006.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length510
Homology
BLAST of Gvermi8006.t1 vs. uniprot
Match: A0A2V3IEY7_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEY7_9FLOR)

HSP 1 Score: 536 bits (1382), Expect = 4.550e-185
Identity = 277/504 (54.96%), Postives = 361/504 (71.63%), Query Frame = 0
Query:    1 MVLVPTSPGTLAVLMGVVELFILESFRFLVSMALAANRSLRLTRFGKLHLVSAARQNDRWQIYVSVISVMLVVVLIVLELSIDGVPMPSTGSPIQAMCYAPDRLTRYTGGFGPYTSEADDTRFPVYLEKAGCMNSLLSTALSGTGGLRIGYPKCTMPFDKPKQRSFVSDFRGCGVGFVGESESGDFHCDVLPTGVANQSMLAGNSFLGVFESGRNSSSLFKFNAIANQRYLSNARVPHSWMLNNTEQSVSVDCRDLSLECNELSRERASSAAKSVHTSRASFGIYIQALQNGNSTVCLFENGMRSQAWWLEMDQRLPGADERTRRSGPILTGFQVSGEARCVLNLDSLTARLHYDATEFASSLPEGNILNWIQRHVVATGIKTPFASSRQCDVVAVIEGSSMDLGWFIATCILSCAVMLFSVAALMHVLYVRLWCKLKKDPLTPLWPIREVIRMREAERHATHAPLVAHGDVFVGVVEKDGVASFDVYANDNFEAVRCSKKPFM 504
            MVLVPT+P TLAV++GV+EL ILE+FR L++ ALAA R ++L+R G+LHL SAARQND  Q++++V+S+ LVVV+I+LELSIDG+ + +TGS I+A C+AP+RLTRY GGFGP  SEADDTRF  YLE+  C +SLL +A+SGT GL+IGYP+CT  F   + R    + +GCGVGFV  S +GDFHCD+LP G+     LAG +F+ V E+G NSSS F+FN    QRYLSN+R+P SWMLN+T  SV V C  L L+C  LSRERA++A KSV  S A  G+YIQ L+NGNS+VCLFE+GM+S+A WLEM+Q LPG +ER  R GP+LT FQV G ARC+  LD+  ARLHYDA EF +  PE  +L W+QRHVVATGIKT   +   C V   IEGSS+  GW +A  +LS  +++ S  A+ + ++       K+DPLTP+W + EV+R R+A   ++        DV+VGVVE++G A F+VYA   FE VR S  PF+
Sbjct:    1 MVLVPTTPATLAVVIGVIELLILEAFRTLLNAALAARRRVKLSRLGRLHLYSAARQNDWLQLWITVVSITLVVVVIILELSIDGLILRNTGSRIRAQCFAPERLTRYWGGFGPSASEADDTRFGQYLEQTACGDSLLRSAISGTSGLQIGYPQCTARFGPARPRQLSFELQGCGVGFVSASSAGDFHCDLLPVGIGFPRTLAGTNFVAVLETGHNSSSDFEFNDEPAQRYLSNSRIPSSWMLNSTGSSVEVPCTSLGLDCYTLSRERAATAPKSVRQSTAPAGVYIQVLENGNSSVCLFESGMQSRAEWLEMNQLLPGGEERDSRRGPVLTAFQVRGNARCIERLDAAVARLHYDAVEFTTGPPESGLLEWLQRHVVATGIKTAVENEVPCTVFEAIEGSSISTGWLVAASVLSGLLIVVSGVAMGYAVWTHFSKAAKQDPLTPIWSMWEVLRARQAWDGSSQRMDGKPCDVYVGVVEEEGEARFEVYAEAEFETVRRSTLPFV 504          
BLAST of Gvermi8006.t1 vs. uniprot
Match: A0A2V3IEY1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEY1_9FLOR)

HSP 1 Score: 196 bits (498), Expect = 1.660e-52
Identity = 152/546 (27.84%), Postives = 256/546 (46.89%), Query Frame = 0
Query:    4 VPTSPGTLAVLMGVVELFILESFRFLVSMALAANRSLRLTRFGKLHLVSAARQNDRWQIYVSVISVMLVVVLIVLELSIDGVPMPSTGS-PIQ--AMCYAPDRLTRYTGGFGPYTSEADDTRFPVYLEKAGCMNSLLSTALSGTGGLRIGYPKCTMPFDKPKQRSFVSDFRGCGVGFVGESESGDFHCD--------VLPTGVANQSMLAGNSF--LGVFESGRNSSSLFKFNAIANQRYLSNARVPHSWM-----LNNTEQSVSVDCRDLSLECNELSRERASSAAKSVHTSRAS-FGIYIQALQNGNSTVCLFENGMRSQAWWLEMDQRLPGADERTRRSGPILTGFQVSGEARCVLNLDSLTARLHYDATE---------FASSLPEGNILNWIQRHVVATGIKTPFASSRQCDVVAVIEGSSMDLGWFIATCILSCAVMLFSVAALMHVLYVRLWCKLKKDPLTPLWPIREVI-----------------------------RMREAERHATHAPLVAHGDVFVGVVEKDGVASFDVYANDN 492
            +   P  LAV++GV+EL + E F+     A A +R  +L   G+  + +      R     + +  +L+V+ IVLELSID    PS+   PI     C+ P R TRY    GP  SE DD R   Y+++AGC   +L  ++ G   L  GYP C +P    ++   V   +G  VGFVG SE+GD H D        ++   V +  MLAG SF  L ++  G++ +          +R  +N  +P  ++     +   E + +V C   + EC ++ R +A S    V + R +   + I +L+N +S++C+F++ M  Q  W+ ++  +P   ER  R+GP +   ++ G ARC+  L   ++R++ DA E            +    +  + +QR  V  G+KT       C  +AV+EGS++     I T + S  ++LF VA     +  +  C ++ DPL PLWP++ ++                             R+R   RH     L +  D++VG+ ++ GV     +++D+
Sbjct:    5 ISAKPSVLAVIIGVIELILSELFKLTADCASAWHRRKQLYHNGRFRVRANPYLQQRHTYLTTGLLFVLLVLTIVLELSIDSAAFPSSSRVPIDQGVRCFGPTRDTRYFNKRGPRNSELDDDRVASYIKQAGCGQGMLDLSVQGAAALETGYPGC-LPGFASREFDEVLGIQGGAVGFVGNSEAGDPHLDYGVERDGEIVSPDVGD--MLAGTSFWLLSIWGLGKSVAFWSFGGGRVEERVGTNLAIPKRFIDDTPKVFRAESTANVTCTSNARECYDMVRPKALSVDPVVRSYRENTLAVVISSLKNHDSSLCIFDSSMDMQVSWIYLNLFIPDV-ERDGRNGPAIVRLRIRGRARCMSKLPRQSSRMYLDAMERVVLNETLNTTDTASFDSARDVLQRAAVIIGMKTLPEEGVPCQPLAVMEGSTVGAAELIVTAVFSALLLLFVVALFAMTIAAQRSCPVRVDPLNPLWPVQLLVAETREREEDNLRAGSDGPPDVSMGGTAQRRVRALRRHTRSLQLSSADDLWVGLEDEGGVTHLTAHSSDD 546          
The following BLAST results are available for this feature:
BLAST of Gvermi8006.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IEY7_9FLOR4.550e-18554.96Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IEY1_9FLOR1.660e-5227.84Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 431..509
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 404..430
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 83..403
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 36..61
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..35
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 62..82
NoneNo IPR availableTMHMMTMhelixcoord: 60..82
NoneNo IPR availableTMHMMTMhelixcoord: 406..428
NoneNo IPR availableTMHMMTMhelixcoord: 15..37

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24226contigScGOVlb_24226:617654..619183 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi8006.t1Gvermi8006.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24226 617654..619183 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi8006.t1 ID=Gvermi8006.t1|Name=Gvermi8006.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=510bp
MVLVPTSPGTLAVLMGVVELFILESFRFLVSMALAANRSLRLTRFGKLHL
VSAARQNDRWQIYVSVISVMLVVVLIVLELSIDGVPMPSTGSPIQAMCYA
PDRLTRYTGGFGPYTSEADDTRFPVYLEKAGCMNSLLSTALSGTGGLRIG
YPKCTMPFDKPKQRSFVSDFRGCGVGFVGESESGDFHCDVLPTGVANQSM
LAGNSFLGVFESGRNSSSLFKFNAIANQRYLSNARVPHSWMLNNTEQSVS
VDCRDLSLECNELSRERASSAAKSVHTSRASFGIYIQALQNGNSTVCLFE
NGMRSQAWWLEMDQRLPGADERTRRSGPILTGFQVSGEARCVLNLDSLTA
RLHYDATEFASSLPEGNILNWIQRHVVATGIKTPFASSRQCDVVAVIEGS
SMDLGWFIATCILSCAVMLFSVAALMHVLYVRLWCKLKKDPLTPLWPIRE
VIRMREAERHATHAPLVAHGDVFVGVVEKDGVASFDVYANDNFEAVRCSK
KPFMPLFPG*
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