Gvermi13346.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi13346.t1
Unique NameGvermi13346.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length384
Homology
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BLAST of Gvermi13346.t1 vs. uniprot
Match: A0A6A3W3W3_9STRA (Uncharacterized protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3W3W3_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 3.220e-8
Identity = 52/173 (30.06%), Postives = 89/173 (51.45%), Query Frame = 0 
Query:   64 VQMIQPIKAPALKSFSRLDLAEFQMAHSRY--LISCRNHGVEG------RSVLECLDPKLLVVLSVQYLQKPAKD-VTDEDLNGFIQNRLMKDEHFTEENLKRIFSK-LKMDLSEADPVQRVIRYNMDYLTLMASHGLSALANNVGFRKQLVQLLLEGIRPSNLRQLMRQKTR 226
            V ++ P+ AP + S S   L E++ A + Y   +  R+ G E        SV   +D KLL  L        +KD VTD+ +   ++  L + ++ T  ++ R+FSK L++D+SE+D  +RV++Y M    L+  +GL A        K+  +LL+E + PS L+  ++   R
Sbjct:   24 VPLLIPVVAPRMTSMSHSALVEWKKARTEYEESVKARSKGDEELYERLKESVKSTIDEKLLRALCTYRWGGLSKDDVTDDRIMSEVRAILQRVKNDTLPDVDRMFSKQLRLDMSESDMSERVLKYFMQCNQLIEENGLVACFEGEHGSKEKCKLLIESLSPSELKLEVKNAIR 196
[Close]
BLAST of Gvermi13346.t1 vs. uniprot
Match: A0A6A3GJV8_9STRA (Uncharacterized protein (Fragment) n=7 Tax=Phytophthora TaxID=4783 RepID=A0A6A3GJV8_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 5.170e-7
Identity = 51/173 (29.48%), Postives = 88/173 (50.87%), Query Frame = 0 
Query:   64 VQMIQPIKAPALKSFSRLDLAEFQMAHSRY--LISCRNHGVEG------RSVLECLDPKLLVVLSVQYLQKPAKD-VTDEDLNGFIQNRLMKDEHFTEENLKRIFSK-LKMDLSEADPVQRVIRYNMDYLTLMASHGLSALANNVGFRKQLVQLLLEGIRPSNLRQLMRQKTR 226
            V ++ P+ AP + S S   L E++ A + Y   +  R+ G E        SV   +D KLL  L        +KD VTD+ +   ++    + ++ T  ++ R+FSK L++D+SE+D  +RV++Y M    L+  +GL A        K+  +LL+E + PS L+  ++   R
Sbjct:   24 VPLLIPVVAPRITSMSHSALVEWKKARTEYEESVKARSKGDEELYERLKESVKSTIDEKLLRALCTYRWGGLSKDDVTDDRIMSEVRAIPQRVKNDTLPDVDRMFSKQLRLDMSESDMSERVLKYFMQCNQLIEENGLVACFEGEHGSKEKCKLLIESLSPSELKLEVKNAIR 196
The following BLAST results are available for this feature:
BLAST of Gvermi13346.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6A3W3W3_9STRA3.220e-830.06Uncharacterized protein n=1 Tax=Phytophthora fraga... [more]
A0A6A3GJV8_9STRA5.170e-729.48Uncharacterized protein (Fragment) n=7 Tax=Phytoph... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..27
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 352..384
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..57

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_1971contigScGOVlb_1971:458..1607 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi13346.t1Gvermi13346.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_1971 458..1607 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi13346.t1 ID=Gvermi13346.t1|Name=Gvermi13346.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=384bp
MPDEEVRVEPETESVVPPEEKTADSERVAAETIFGSDSTEEDDMEEKPEK
RIENSSEAGQTTLVQMIQPIKAPALKSFSRLDLAEFQMAHSRYLISCRNH
GVEGRSVLECLDPKLLVVLSVQYLQKPAKDVTDEDLNGFIQNRLMKDEHF
TEENLKRIFSKLKMDLSEADPVQRVIRYNMDYLTLMASHGLSALANNVGF
RKQLVQLLLEGIRPSNLRQLMRQKTRTSDARSDPIAFFDLLETWAPLQDV
FHSETIKTAKYINARTVPPNKVLRGSRSAGPRQRPAYPRKENISFGKTNR
KWSCLICGKTNHSTKEHRGASKEDIDKAFQKYRDEKAVSEYCEIPISNSR
IVEKESGNVSEESLATPRDGLEDGSQNAFPINPX
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