Gvermi1870.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi1870.t1
Unique NameGvermi1870.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length451
Homology
BLAST of Gvermi1870.t1 vs. uniprot
Match: A0A2V3ICP2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ICP2_9FLOR)

HSP 1 Score: 505 bits (1301), Expect = 2.080e-174
Identity = 262/295 (88.81%), Postives = 273/295 (92.54%), Query Frame = 0
Query:    1 MPPHSRMNRNTIDFCSNQEPALFNPPVYPQQNSAVHPNVQTHAPNTSNSSPGXXXXXXXXXXXXNNLWDHHSKLAGAFSTAFKDASNRYSGNIYHSWPEKREMFEDVAQNYHCSKAEAFQFLNKLFTGGARVTYRKLIKGQVQDYDTAMAILEMEFHNAPAQARIMAKLESFKFTDFTTGDSSQNDAYVRLTERIEEIFPRIPPQIQHDYHKPRILARAVADQPWALATMDRTDEELPTYSNISSALASILQKHTSRSAAGEFVIPHDNGTFHTNPRYGRSRPRWNEAHNSSKFR 295
            MPPHSRM+RNTIDF SNQ+PALFNPPVYPQQNSAVHPNVQTHAPNTSNSSPGXXXXXXXXXXXXNNLW+ HSKLA AFSTA KDASNRYSGNI  SWPEKREMFEDVAQNY CSKAEA QFLN LFTGGARVT+RKLIKGQVQDYDTAMAILE EFHNAPAQARI+AKLES KFTDFTT DSSQNDAYVRLTERIEE FPR PPQ+QHDYHK RILA AVADQPWAL T+DRTDEELPTYS +SSALAS+LQKH SRSAAGE VIPHDNGTF+TNPRYGRS+PRWNEA N SKFR
Sbjct:  166 MPPHSRMDRNTIDFRSNQKPALFNPPVYPQQNSAVHPNVQTHAPNTSNSSPGXXXXXXXXXXXXNNLWERHSKLAVAFSTASKDASNRYSGNIDDSWPEKREMFEDVAQNYRCSKAEALQFLNNLFTGGARVTFRKLIKGQVQDYDTAMAILEKEFHNAPAQARILAKLESLKFTDFTTADSSQNDAYVRLTERIEEQFPRSPPQMQHDYHKRRILACAVADQPWALGTLDRTDEELPTYSTLSSALASVLQKHASRSAAGESVIPHDNGTFYTNPRYGRSKPRWNEARNPSKFR 460          
BLAST of Gvermi1870.t1 vs. uniprot
Match: A0A2V3J1Y4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J1Y4_9FLOR)

HSP 1 Score: 339 bits (869), Expect = 5.500e-113
Identity = 167/193 (86.53%), Postives = 177/193 (91.71%), Query Frame = 0
Query:  103 MFEDVAQNYHCSKAEAFQFLNKLFTGGARVTYRKLIKGQVQDYDTAMAILEMEFHNAPAQARIMAKLESFKFTDFTTGDSSQNDAYVRLTERIEEIFPRIPPQIQHDYHKPRILARAVADQPWALATMDRTDEELPTYSNISSALASILQKHTSRSAAGEFVIPHDNGTFHTNPRYGRSRPRWNEAHNSSKFR 295
            MFEDVAQNY CSKAEA QFLN LFTGGARVT+RKLIKGQVQ+YDTAMAILE EFHNAPAQARI+AKLES KFTDFTT DSSQNDAYVRLTERIEE+FPR PPQ+QHDYHK RILA AVADQPWAL T+DRTDEELPTYS +SSALAS+LQKH SRSAAGE VIPHDNGTF+TNPRYGRS+PR NEA N SKFR
Sbjct:    1 MFEDVAQNYRCSKAEALQFLNNLFTGGARVTFRKLIKGQVQNYDTAMAILEKEFHNAPAQARILAKLESLKFTDFTTADSSQNDAYVRLTERIEELFPRSPPQMQHDYHKRRILACAVADQPWALVTLDRTDEELPTYSTLSSALASVLQKHASRSAAGESVIPHDNGTFYTNPRYGRSKPRRNEARNPSKFR 193          
BLAST of Gvermi1870.t1 vs. uniprot
Match: A0A2V3IKW6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IKW6_9FLOR)

HSP 1 Score: 273 bits (699), Expect = 2.170e-85
Identity = 147/161 (91.30%), Postives = 151/161 (93.79%), Query Frame = 0
Query:    1 MPPHSRMNRNTIDFCSNQEPALFNPPVYPQQNSAVHPNVQTHAPNTSNSSPGXXXXXXXXXXXXNNLWDHHSKLAGAFSTAFKDASNRYSGNIYHSWPEKREMFEDVAQNYHCSKAEAFQFLNKLFTGGARVTYRKLIKGQVQDYDTAMAILEMEFHNAPA 161
            MPPHSRM+RNTIDF SNQ+PALFNPPVYPQQNSAVHPNVQTHAPNTSNSSPGXXXXXXXXXXXXNNLW+ HSKLA AFSTA KDASNRYSGNI  SWPEKREMFEDVAQNY CSKAEA QFLN LFTGGARVT+RKLIKGQVQDYDTAMAILE EFHNAPA
Sbjct:  166 MPPHSRMDRNTIDFRSNQKPALFNPPVYPQQNSAVHPNVQTHAPNTSNSSPGXXXXXXXXXXXXNNLWERHSKLAVAFSTASKDASNRYSGNIDDSWPEKREMFEDVAQNYRCSKAEALQFLNNLFTGGARVTFRKLIKGQVQDYDTAMAILEKEFHNAPA 326          
BLAST of Gvermi1870.t1 vs. uniprot
Match: A0A2V3J0T3_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0T3_9FLOR)

HSP 1 Score: 149 bits (376), Expect = 2.180e-40
Identity = 74/83 (89.16%), Postives = 77/83 (92.77%), Query Frame = 0
Query:  324 PKGNHNAYLVSEDDLEPIKLDEHEDIQLVTEASPGDTRTPPDSVEHLPADEAQPSEVHFLSELSNSANFHANIGTSAFSDQPF 406
            PKG HNAYLVSEDDLE I+LDEHEDIQLVTE SPGDT TPPDSVEH PADEAQPSEVHFL+E+SNSANFHANIG SAFSDQPF
Sbjct:   21 PKGKHNAYLVSEDDLESIELDEHEDIQLVTEDSPGDTTTPPDSVEHPPADEAQPSEVHFLTEVSNSANFHANIGPSAFSDQPF 103          
BLAST of Gvermi1870.t1 vs. uniprot
Match: A0A2V3IKZ3_9FLOR (Uncharacterized protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IKZ3_9FLOR)

HSP 1 Score: 150 bits (379), Expect = 2.490e-40
Identity = 75/83 (90.36%), Postives = 77/83 (92.77%), Query Frame = 0
Query:  324 PKGNHNAYLVSEDDLEPIKLDEHEDIQLVTEASPGDTRTPPDSVEHLPADEAQPSEVHFLSELSNSANFHANIGTSAFSDQPF 406
            PKG HNAYLVSEDDLE I+LDEHEDIQLVTE SPGDT TPPDSVEH PADEAQPSEVHFL+ELSNSANFHANIG SAFSDQPF
Sbjct:   58 PKGKHNAYLVSEDDLESIELDEHEDIQLVTEDSPGDTTTPPDSVEHPPADEAQPSEVHFLTELSNSANFHANIGPSAFSDQPF 140          
The following BLAST results are available for this feature:
BLAST of Gvermi1870.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3ICP2_9FLOR2.080e-17488.81Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J1Y4_9FLOR5.500e-11386.53Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IKW6_9FLOR2.170e-8591.30Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J0T3_9FLOR2.180e-4089.16Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IKZ3_9FLOR2.490e-4090.36Uncharacterized protein n=2 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 21..69

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_1622contigScGOVlb_1622:839127..840479 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi1870.t1Gvermi1870.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_1622 839127..840479 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi1870.t1 ID=Gvermi1870.t1|Name=Gvermi1870.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=451bp
MPPHSRMNRNTIDFCSNQEPALFNPPVYPQQNSAVHPNVQTHAPNTSNSS
PGHQGQYGQHQNHSNNLWDHHSKLAGAFSTAFKDASNRYSGNIYHSWPEK
REMFEDVAQNYHCSKAEAFQFLNKLFTGGARVTYRKLIKGQVQDYDTAMA
ILEMEFHNAPAQARIMAKLESFKFTDFTTGDSSQNDAYVRLTERIEEIFP
RIPPQIQHDYHKPRILARAVADQPWALATMDRTDEELPTYSNISSALASI
LQKHTSRSAAGEFVIPHDNGTFHTNPRYGRSRPRWNEAHNSSKFRECDHR
NRSHDQQYRPRRKFCPIRRHYHNPKGNHNAYLVSEDDLEPIKLDEHEDIQ
LVTEASPGDTRTPPDSVEHLPADEAQPSEVHFLSELSNSANFHANIGTSA
FSDQPFERRVTLAYILPTSHGQSIWINHPLITTLHCHPLLNHENPQITRR
*
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