Gvermi6628.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6628.t1
Unique NameGvermi6628.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length323
Homology
BLAST of Gvermi6628.t1 vs. uniprot
Match: A0A2V3INB9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3INB9_9FLOR)

HSP 1 Score: 362 bits (930), Expect = 3.420e-122
Identity = 179/251 (71.31%), Postives = 213/251 (84.86%), Query Frame = 0
Query:   73 RVSPCAKTTSSTSPFVKIIGFILIGGLLFTAVQPLLRAA---KTTDALLDAKLGKIPVFTVTDSTGRPFLSESDDGRLRRGFFFIQPADAEKYLEKVMEQSEDAKVLAIGLNEAIKFLDTRAGPPKSVPEIFELFPDDHEAALADELTQGAFHRNFGENGVPVFYLDGLAIKDDLQDTPVYPLFFAKEKLDEALKELKTRDPSAVLDVNDLQIIDLRQTIKEIKANTNSKLSRVVFIPLDDSMKRLRASTS 320
            R+ P A+ +SSTSP VK+IG +LIGG+LF+ VQPL+ A    K+ D LLDAKL KIPVFTVTDSTGRPFLSE+DDGRLRRG+FF+QPADAEKYLE+V EQ+EDAKVLAIGLNEAIKFLDTR G  KSVPE FE+FPDDHEAALA ++T G F ++FGENGVP+FY+DGLA+KD   D PVYPLFF KE LDE +K+LK +DPSA LD+ DL+IIDL+QTIKEI+A +N KLSRVVF+PL+DS+ RLR + S
Sbjct:   75 RICPTARGSSSTSPAVKLIGALLIGGILFSTVQPLVTAVGGNKSVDTLLDAKLRKIPVFTVTDSTGRPFLSETDDGRLRRGYFFVQPADAEKYLEQVKEQNEDAKVLAIGLNEAIKFLDTRIGSAKSVPEKFEIFPDDHEAALAKDITNGDFQKSFGENGVPIFYIDGLAVKDSKDDPPVYPLFFEKETLDETIKDLKKKDPSAALDLKDLRIIDLKQTIKEIRAGSNPKLSRVVFVPLNDSLNRLRTTIS 325          
BLAST of Gvermi6628.t1 vs. uniprot
Match: R7Q256_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q256_CHOCR)

HSP 1 Score: 245 bits (625), Expect = 4.050e-76
Identity = 117/233 (50.21%), Postives = 164/233 (70.39%), Query Frame = 0
Query:   78 AKTTSSTSPFVKIIGFILIGGLLFTAVQPLLRAAKTT-----DALLDAKLGKIPVFTVTDSTGRPFLSESDDGRLRRGFFFIQPADAEKYLEKVMEQSEDAKVLAIGLNEAIKFLDTRAGPPKSVPEIFELFPDDHEAALADELTQGAFHRNFGENGVPVFYLDGLAIKDDLQDTPVYPLFFAKEKLDEALKELKTRDPSAVLDVNDLQIIDLRQTIKEIKANTNSKLSRVVF 305
            A  ++  S  +KI   +++ G + TA  P     K       D ++D +L K+PVFTVTD++GRPFLSE++D R R G+FFIQPADAE +L +V  ++ DAKVL +GLNEA+K+LD++    KS+PE F LFPD+HE+ +A ++T GAF RNFG +GVP+FY+DGLA+K+D +   + PLFF KEKLDE L+ LK + P  V+++ DLQ+IDL QTIKEI+   N K +R+ F
Sbjct:   58 ADDSTEVSLPIKIGALLVVAGFIITAFLPAAGVIKNALTDNGDNVVDYQLSKVPVFTVTDASGRPFLSETEDHRSRLGYFFIQPADAELFLNRVKNENADAKVLTVGLNEAVKYLDSKPRSSKSIPETFSLFPDEHESQIAQDITDGAFQRNFGPSGVPIFYVDGLALKEDKEGQAIIPLFFEKEKLDETLETLKKQSPEIVIEMKDLQVIDLNQTIKEIRTGGNPKFNRIAF 290          
BLAST of Gvermi6628.t1 vs. uniprot
Match: A0A5J4Z0H6_PORPP (Protein TIC 22, chloroplastic n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z0H6_PORPP)

HSP 1 Score: 118 bits (295), Expect = 2.860e-27
Identity = 78/247 (31.58%), Postives = 139/247 (56.28%), Query Frame = 0
Query:   81 TSSTSPFVKIIGFIL-IGGLLFTAVQPLLRAAKTTDALLDA-----KLGKIPVFTVTDSTGRPFLSESDDGRLRRGFFFIQPADAEKYLEKVMEQSE-DAKVLAIGLNEAIKFLDTRAGPPKSVPEIFELFPDDHEAALADELTQGAFHRNFGENGVPVFYLDGLAIKDDLQDTPVYPLFFAKEKLDEALKELKTRDP--SAVLDVNDLQIIDLRQTIKEIKANTNSKL-SRVVFIPLDDSMKRLRA 317
            +SS++   K +G +  +   +F+++ PL  AA +  A +       +L  +PVF+VTD+ G+P+L+E    + R G F++ P++AE  +  V  Q E DA+VL + L++A+KF        +S  ++F+L     E  LA ++T  A    FGE+ VP+FYL+GLA K +     V+PLFF  E+L+  +++L+ +       L+ +++ I+DL   + E+ +     + + VVF+P  D M  ++A
Sbjct:   70 SSSSAVSWKTVGAVFALTAFVFSSLAPLYFAATSGSASVSKAEIAERLHAVPVFSVTDTQGKPYLAELTS-KERLGLFYLDPSEAEAQMRYVQSQGETDARVLPVALDDALKFTARPPRADESSKDVFKLKAKARELQLAQQMTGKA--ETFGEDSVPLFYLEGLAFKRN--GARVFPLFFNYEELNAYVQQLRKQGTVDEKTLEASNVNIVDLNMVLSELASPRRDPIWNEVVFLPPQDGMNFMKA 311          
BLAST of Gvermi6628.t1 vs. uniprot
Match: A0A7S1EUH9_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1EUH9_9RHOD)

HSP 1 Score: 110 bits (275), Expect = 2.380e-24
Identity = 83/251 (33.07%), Postives = 137/251 (54.58%), Query Frame = 0
Query:   82 SSTSPFVKIIGFILIGGL-LFTAVQPLLRAAKTTDALLDA-----KLGKIPVFTVTDSTGRPFLS---ESDDGRLRRGFFFIQPADAEKYLEKVMEQS-EDAKVLAIGLNEAIKFLDTR-AGPPKSVPEIFELFPDDHEAALADELTQGAFHRNFGENGVPVFYLDGLAIKDDLQDTPVYPLFFAKEKLDEALKELKTRDPS--AVLDVNDLQIIDLRQTIKEIKA--NTNSKLSRVVFIPLDDSMKRLRA 317
            S  SP  K +G I   GL L +++ PL+ A +   + L       +L KIPVF+VTDS G+PFL+   ES    +R G F++ PA+AE+ L  + +Q  EDA+VL + L EA+ F++           + F + P   E   A  L    F      +GVP+FY+DGLAI  +  +  +YP+FF  E+L++ + +LK  DP     L+   + II L   ++E++A  + NS + +++  P ++ ++ L++
Sbjct:   78 SGESPNRKNLGAIFALGLFLVSSILPLVGAIRGGSSALQPQEISQRLDKIPVFSVTDSEGKPFLTDYAESSGSTVREGLFYLDPAEAEQQLVLIKKQGYEDARVLPVSLKEALNFVEHPIVDKATKKADEFRIQPKQLEIDAASTLLGRQF-----SDGVPLFYMDGLAINRN--NDQIYPVFFNYEELEKFVSKLKD-DPKNKEFLEKQTVNIIGLNAVLREMRAAPSGNSAIRQMILYPPEEGIQYLKS 320          
BLAST of Gvermi6628.t1 vs. uniprot
Match: A0A7S1HK72_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1HK72_HEMAN)

HSP 1 Score: 90.9 bits (224), Expect = 4.670e-17
Identity = 79/259 (30.50%), Postives = 121/259 (46.72%), Query Frame = 0
Query:   80 TTSSTSPFVKIIGFILIG-GLLFTAVQPLLR---------------AAKTTDALLDAKLGKIPVFTVTDSTGRPFLSESDDGRLRRGFFFIQPADAEKYLEKVME---QSEDAKVLAIGLNEAIKFLDTRAGPPKSVPEIFELFP-----DDHEAALADELTQGAFHRNFGENGVPVFYLDGLAIKDDLQDTPVYPLFFAKEKLDEALKEL-KTRDPSAVLDVNDLQIIDLRQTIKEIKANTNSKLSRVVFIPLDDSMK 313
            T  ST    + I  + IG   LFT + PL+                A K   + +D +L  +PVF+VTD+ G P+++E+ DG   +GFFF+ P+DA+ Y  K+ E    S   K+    L+  I ++    G     P  FE+FP      D  A  A +     +     +  VPVF++ GLA++ D Q   V P+FF KE       +L K   P       DL+  DL   IK+I+   +S+  +V F P  +S++
Sbjct:   81 TMQSTKSGTQQIIIVFIGIAFLFTGLYPLINNSMRFATAPSSMSGSATKMKQSEIDDRLRSVPVFSVTDAKGTPYIAETKDGE-SKGFFFLDPSDAKAYQAKIKELQGPSATVKITPTTLDRGIAYIK---GKKSETP--FEIFPASGAVKDARAIKAPDTCDICWGAEGVQEYVPVFWVRGLALETDNQ--LVTPVFFDKEMALGYYGQLGKAEAP-------DLECFDLSALIKKIRKGGSSEFRKVSFYPSKNSVE 324          
BLAST of Gvermi6628.t1 vs. uniprot
Match: L1K3Z1_GUITC (Member of Tic22 family n=2 Tax=Guillardia theta TaxID=55529 RepID=L1K3Z1_GUITC)

HSP 1 Score: 89.4 bits (220), Expect = 1.270e-16
Identity = 70/246 (28.46%), Postives = 119/246 (48.37%), Query Frame = 0
Query:   88 VKIIGFILIGGLLFTAVQPLLRAAKTTDAL-----------LDAKLGKIPVFTVTDSTGRPFLSESDDGRLRRGFFFIQPADAEKYLEKVME---QSEDAKVLAIGLNEAIKFLDTRAGPPKSVPEIFELFPDDHEAALADELTQGA-FHRNFGENGV----PVFYLDGLAIKDDLQDTPVYPLFFAKEKLDEALKEL-KTRDPSAVLDVNDLQIIDLRQTIKEIKANTNSKLSRVVFIPLDDSMK 313
            + I+G   + G LF  +   L  AK   ++           +D KL ++P F VTD  G P+++E       RG+FF+ P DAEK+ ++V E   Q     V    L+EAIK++ ++A       + FE+ P   E  +A  +         +G  GV    PV+ ++GL ++ D     + PLFF K   +   ++  KT +P        LQ++DL   IK+++   +++  +VVF P  D+++
Sbjct:   75 IPILGVGFVFGGLFPLINNGLNYAKLDSSISGAATGLKQKEIDEKLKRVPAFAVTDDQGTPYVAEYQGKN--RGYFFLNPKDAEKFRDRVKELQTQGSSVSVRTTTLDEAIKYIKSKANS-----DPFEILPYGEEIEIARGIKNPENCDICWGAEGVKEKIPVYLVEGLGLQKD--SKVITPLFFDKAGAESFYRQASKTGEPK-------LQVLDLSALIKKMRKGGSTEFRKVVFFPNKDAIE 304          
BLAST of Gvermi6628.t1 vs. uniprot
Match: A0A5J4Z0X3_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z0X3_PORPP)

HSP 1 Score: 58.5 bits (140), Expect = 3.090e-7
Identity = 36/109 (33.03%), Postives = 63/109 (57.80%), Query Frame = 0
Query:  212 LADELTQGAFHRNFGENGVPVFYLDGLAIKDDLQDTPVYPLFFAKEKLDEALKELKTRDP--SAVLDVNDLQIIDLRQTIKEIKANTNSKL-SRVVFIPLDDSMKRLRA 317
            LA ++T  A    FGE+ VP+FYL+GLA K +     V+PLFF  E+L+  +++L+ +       L+ +++ I+DL   + E+ +     + + VVF+P  D M  ++A
Sbjct:   10 LAQQMTGKA--EAFGEDSVPLFYLEGLAFKRN--GARVFPLFFNYEELNAYVQQLRKQGTVDEKTLEASNVNIVDLNMVLSELASPRRDPIWNEVVFLPPQDGMNFVKA 114          
BLAST of Gvermi6628.t1 vs. uniprot
Match: A9BLA6_HEMAN (Tic22 n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A9BLA6_HEMAN)

HSP 1 Score: 61.2 bits (147), Expect = 5.430e-7
Identity = 55/203 (27.09%), Postives = 103/203 (50.74%), Query Frame = 0
Query:  121 KLGKIPVFTVTDSTGRPFLSESDDGRLRRGFFF--IQPADAEKYLEKVMEQSEDAKVLAIGLNEAIKFLD---TRAGPP----KSVPEIFELFPDDHEAALADELTQGAFHRNFGENGVPVFYLDGLAIKDDLQDTPVYPLFFAKEKLDEALKELKTRDPSAVLDVNDLQ--IIDLRQTIKEIKANTNSKLSRVVFIPLDDSM 312
            K+  +PVF+VT+  G+PFL ++  G      FF  I+  +  K LEK   Q+ + ++  +GL++AIK +    T +G      + +   F+L PD+ +   A  LT+    +    N +P+F + GL+I    +   + P+FF KE L+    ++++ +P    +   ++  +I L   + E K   N +L+   F+P  +S+
Sbjct:  106 KIKTVPVFSVTNRFGQPFLIQNKHGEQVALMFFSHIEALEFGKELEK-SHQATNPRIFIMGLDKAIKMISHGATSSGIKDQYGQDIKMRFQLIPDEKQLDHALNLTKIRGSQQSPPN-IPIFSIPGLSIIKGKEK--ISPMFFTKEDLEITWDKIRSINPDFEREPEIIEGDLISLIFYMTEGKGTINQRLN-FGFVPPSESL 303          
BLAST of Gvermi6628.t1 vs. uniprot
Match: A0A7S0I601_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0I601_9EUKA)

HSP 1 Score: 61.2 bits (147), Expect = 6.150e-7
Identity = 58/185 (31.35%), Postives = 84/185 (45.41%), Query Frame = 0
Query:  110 AAKTTDALLDAKLGKIPVFTVTDSTGRPFLSESDDGRLRRGFFFIQPADAEKYLEKVMEQ----SEDAKVLAIGLNEAIKFL----------DTRAGPPKSVPEIFELFPDDHEAALADELTQGAFHRNFGENGVPVFYLDGLAIKDDLQDTPVYPLFFAKEKLDEALKELKTRDPSAVLDVNDL 280
            A K     L AKLGK+PVF VT+  G PFL++   G  +    F+ P+DA+K L+ V++     S  AKVL   L+ A+K            D  +G   S+   F     +  +A A  L             VP +   GL  K   ++  V P+F +K+  D AL++L      A L+V DL
Sbjct:  110 ARKKAKLALKAKLGKVPVFMVTNGGGSPFLNKLSSGD-QSAVMFLFPSDAQKMLKAVLKAPNGASSGAKVLPSNLDRALKLAMLPPSNSGLRDPASGRDLSMSWQFMPHAAEMRSAQAAMLKSAKAPT---VPKVPAYTASGLFFKKHGRE--VQPIFLSKKDADAALEQLPAGH-GAKLEVIDL 287          
BLAST of Gvermi6628.t1 vs. uniprot
Match: A0A7J7ICD8_9RHOD (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7ICD8_9RHOD)

HSP 1 Score: 59.7 bits (143), Expect = 2.620e-6
Identity = 50/208 (24.04%), Postives = 98/208 (47.12%), Query Frame = 0
Query:  148 RRGFFFIQPADAEKYLEKVMEQSE--------DAKVLAIGLNEAIKFLDTRAGPPKSVPEI---FELFPDDHEAALADELTQ--GAFHRNFGENGVPVFYLDGLAIKDDLQDTP---------------------VYPLFFAKEKLDEA---LKELKTRDPSAV---LDVNDLQIIDLRQTIKEIK--------ANTNSKLSRVVFIP 307
            R G+F++   DA  +L ++ ++ +        DA ++AI L+EA+KF+  R G    VP+    F L P +     A+ + +  GA   +    G+P+F + G A++  ++D                       + PLFFA + +  A   L+++ +   +A+   L ++ +Q+ DLR  ++E++        A+T +    +VF+P
Sbjct:  225 RIGYFYLDYRDASNFLRQIHDRQDGEASDLVRDAHIVAIPLDEALKFIPPREGGQGRVPDPSDEFHLVPSEQSVRFAERVLRANGALGASARIRGIPLFSIRGFALQRVVEDGSKPESKTMNTSGGTTASDEPALLTPLFFAPDDVQLAWDRLRQISSTQGTALPSQLPLDRVQVTDLRTVLQEMRQGTGGFQSADTMTDYRSLVFLP 432          
The following BLAST results are available for this feature:
BLAST of Gvermi6628.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
A0A2V3INB9_9FLOR3.420e-12271.31Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q256_CHOCR4.050e-7650.21Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A5J4Z0H6_PORPP2.860e-2731.58Protein TIC 22, chloroplastic n=1 Tax=Porphyridium... [more]
A0A7S1EUH9_9RHOD2.380e-2433.07Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A7S1HK72_HEMAN4.670e-1730.50Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
L1K3Z1_GUITC1.270e-1628.46Member of Tic22 family n=2 Tax=Guillardia theta Ta... [more]
A0A5J4Z0X3_PORPP3.090e-733.03Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
A9BLA6_HEMAN5.430e-727.09Tic22 n=1 Tax=Hemiselmis andersenii TaxID=464988 R... [more]
A0A7S0I601_9EUKA6.150e-731.35Hypothetical protein n=1 Tax=Phaeocystis antarctic... [more]
A0A7J7ICD8_9RHOD2.620e-624.04Uncharacterized protein n=1 Tax=Cyanidiococcus yan... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007378Tic22-likePFAMPF04278Tic22coord: 119..308
e-value: 1.5E-19
score: 70.3
IPR007378Tic22-likePANTHERPTHR33926PROTEIN TIC 22, CHLOROPLASTICcoord: 113..315
NoneNo IPR availableGENE3D3.40.1350.100coord: 117..220
e-value: 2.3E-14
score: 55.5
NoneNo IPR availableGENE3D3.40.1350.100coord: 221..299
e-value: 1.7E-10
score: 42.6
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 87..108
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..86
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 109..322
NoneNo IPR availableTMHMMTMhelixcoord: 86..108

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_88contigScGOVlb_88:1763442..1764410 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6628.t1Gvermi6628.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_88 1763442..1764410 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6628.t1 ID=Gvermi6628.t1|Name=Gvermi6628.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=323bp
MKTENKKVINSFFSSRVSTSFVSPALHLGFFQGSSLTPTCTPLKHLGLHI
KRSRSCSIHAPFHHGVTHKSNLRVSPCAKTTSSTSPFVKIIGFILIGGLL
FTAVQPLLRAAKTTDALLDAKLGKIPVFTVTDSTGRPFLSESDDGRLRRG
FFFIQPADAEKYLEKVMEQSEDAKVLAIGLNEAIKFLDTRAGPPKSVPEI
FELFPDDHEAALADELTQGAFHRNFGENGVPVFYLDGLAIKDDLQDTPVY
PLFFAKEKLDEALKELKTRDPSAVLDVNDLQIIDLRQTIKEIKANTNSKL
SRVVFIPLDDSMKRLRASTSSP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007378Tic22-like