Gvermi12987.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12987.t1
Unique NameGvermi12987.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length182
Homology
BLAST of Gvermi12987.t1 vs. uniprot
Match: A0A2V3ISV1_9FLOR (Uncharacterized protein n=3 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISV1_9FLOR)

HSP 1 Score: 77.0 bits (188), Expect = 1.830e-13
Identity = 40/115 (34.78%), Postives = 74/115 (64.35%), Query Frame = 0
Query:    1 MIDTVEAALNAKVDASNSNNEAVISSVEAQGQVTEVHADDLVVNDQLLTIDSIRDQMTPEEEDKIYKNAKIVKDSVTKVARDALNINIQASEAYDSSMKATDMARKAVQAEKDGK 115
            M+DT++AA NA V+AS+SN+ A   + E+   V +  +D   VN+ L +I+  RD+++ EE D++ K+A++V+ S T+ AR+AL ++++A+E         D+ + A + +K+ K
Sbjct:  120 MLDTLDAAENALVEASHSNDAASAYTAESYQLVAKAQSDVSAVNEALRSIEPFRDELSDEETDELEKDAEVVRQSATEAAREALQVSLKAAEVNKERRLVADLKKTASKRDKEAK 234          
BLAST of Gvermi12987.t1 vs. uniprot
Match: A0A2V3IHC7_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHC7_9FLOR)

HSP 1 Score: 58.2 bits (139), Expect = 8.760e-7
Identity = 47/166 (28.31%), Postives = 73/166 (43.98%), Query Frame = 0
Query:    1 MIDTVEAALNAKVDASNSNNEAVISSVEAQGQVTEVHADDLVVNDQLLTIDSIRDQMTPEEEDKIYKNAKIVKDSVTKVARDALNINIQASEAYDSSMKATDMARKAVQAEKDGKVLENRLEEESGKGKKENRECSTCKKLEEDIEKLKQLRKEAAVNAGNSAKSA 166
            ++DT+EAA NA V+AS+SN+ A   + EA   V +  AD   V+  L +I+  RD+++ EE D I K                       +E         D  +KA + +K+                 E + C  C  L+E+ EK    RK++ V AG +A+ A
Sbjct:  120 IMDTLEAADNALVEASHSNDLASSYTSEAYHMVIKAQADISTVDAALKSIEPFRDELSDEETDAIEKXXXXXXXXXXXXXXXXXXXXXXXAEVNKERRVVADFKKKANKCDKEAXXXXXXXXXXXXXXXXEQKTCEECGALKEENEKQTDSRKDSCVKAGEAAQRA 285          
The following BLAST results are available for this feature:
BLAST of Gvermi12987.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3ISV1_9FLOR1.830e-1334.78Uncharacterized protein n=3 Tax=Gracilariopsis cho... [more]
A0A2V3IHC7_9FLOR8.760e-728.31Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 138..158
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 156..182

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_7815contigScGOVlb_7815:1..544 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12987.t1Gvermi12987.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_7815 1..544 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12987.t1 ID=Gvermi12987.t1|Name=Gvermi12987.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=182bp
MIDTVEAALNAKVDASNSNNEAVISSVEAQGQVTEVHADDLVVNDQLLTI
DSIRDQMTPEEEDKIYKNAKIVKDSVTKVARDALNINIQASEAYDSSMKA
TDMARKAVQAEKDGKVLENRLEEESGKGKKENRECSTCKKLEEDIEKLKQ
LRKEAAVNAGNSAKSAAKNKDTTARILDEIRX
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