Gvermi13801.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi13801.t1
Unique NameGvermi13801.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length383
Homology
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BLAST of Gvermi13801.t1 vs. uniprot
Match: A0A2V3IUW8_9FLOR (UBA domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUW8_9FLOR)

HSP 1 Score: 385 bits (989), Expect = 2.790e-129
Identity = 241/391 (61.64%), Postives = 290/391 (74.17%), Query Frame = 0 
Query:    1 MSITESLLPRHILFNAALYAGAALVYTVVFFSLETSKPGEYVFYDSDKSRWRTIFNNIAIISWPTLLFGALILLAVRVGAKVRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAS------LRMEEAPK--PYPPNLQNVSPKEDEENPPVIRAQSSGKAKRAKSGTFHVPKGYVAVTRSQRFYAAFGFLWVAVGLALTAVAAAIVFVGQRERFQQIATRLGNKREDWKTWIIPICTGGIPLILFGSLAITSSFKFFSTLTARTSILTRAAADSEGSVREVEDLDLLYNGDRESPDDDLDDSDEADLKKAPPPAVSV-KNNGMIDATILPNSPDQSTVDRLMRQLRDMGFPNPDQNMAALQASSFDLEKASDKLVNTAT 382
            M++TE++LPR ILFN ALYA  AL+YTVV FSLE ++PGEYVF DSD+S+WRT+FNN AI+SWP LLFGALIL+AVR GA VRR XXXXXXXXXXXXXXXXXXXXXX                  ++      LR E A +    P  +  ++  +DEENP ++R +SS + KR++S T HVP+GYV+VTR+QR YAAFGFLWVAVGLA+TA AAAIVFVGQRE F  +A  LG++   WKTW+IP+ T GI + +FG LAIT+SFKFFSTLTAR ++     A SEGSVREVED+DLLY  D E  +DD+DD    D   A  P+ ++ +   +ID+ ILP  PDQSTVDRLMRQLRDMGF NPDQNMAALQASSFDLEKAS+KL NTAT
Sbjct:    1 MALTETILPRPILFNGALYACLALIYTVVIFSLEAARPGEYVFSDSDESKWRTVFNNTAIVSWPVLLFGALILIAVRAGANVRRRXXXXXXXXXXXXXXXXXXXXXXLSNRNNSDNTIPNQPLPPSTTPPPVALRAESAHRHESAPDLVHTLTLNDDEENPDLLRVKSSRRVKRSRSETSHVPRGYVSVTRAQRLYAAFGFLWVAVGLAVTAAAAAIVFVGQREHFDDVARILGSENPVWKTWVIPLLTSGILIPVFGVLAITTSFKFFSTLTARYTVAMPTPAASEGSVREVEDIDLLYKMDNEIGEDDVDD----DFVAADSPSANLGEYTRIIDSAILPTVPDQSTVDRLMRQLRDMGFRNPDQNMAALQASSFDLEKASEKLANTAT 387
The following BLAST results are available for this feature:
BLAST of Gvermi13801.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IUW8_9FLOR2.790e-12961.64UBA domain-containing protein n=1 Tax=Gracilariops... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.8.10coord: 341..380
e-value: 1.4E-9
score: 39.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 294..324
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 348..382
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 85..162
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 81..186
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 213..231
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..33
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 187..212
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 34..52
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 255..382
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 53..80
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 232..254
NoneNo IPR availableTMHMMTMhelixcoord: 12..34
NoneNo IPR availableTMHMMTMhelixcoord: 54..76
NoneNo IPR availableTMHMMTMhelixcoord: 235..257
NoneNo IPR availableTMHMMTMhelixcoord: 191..213
IPR015940Ubiquitin-associated domainPROSITEPS50030UBAcoord: 335..380
score: 11.028776
IPR009060UBA-like superfamilySUPERFAMILY46934UBA-likecoord: 334..379

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_647contigScGOVlb_647:191155..192303 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi13801.t1Gvermi13801.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_647 191155..192303 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi13801.t1 ID=Gvermi13801.t1|Name=Gvermi13801.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=383bp
MSITESLLPRHILFNAALYAGAALVYTVVFFSLETSKPGEYVFYDSDKSR
WRTIFNNIAIISWPTLLFGALILLAVRVGAKVRRRRRKRSKNKKRSSSKN
SLSERNASNNSLEAPPPPPSTAPPAASLRMEEAPKPYPPNLQNVSPKEDE
ENPPVIRAQSSGKAKRAKSGTFHVPKGYVAVTRSQRFYAAFGFLWVAVGL
ALTAVAAAIVFVGQRERFQQIATRLGNKREDWKTWIIPICTGGIPLILFG
SLAITSSFKFFSTLTARTSILTRAAADSEGSVREVEDLDLLYNGDRESPD
DDLDDSDEADLKKAPPPAVSVKNNGMIDATILPNSPDQSTVDRLMRQLRD
MGFPNPDQNMAALQASSFDLEKASDKLVNTAT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015940UBA
IPR009060UBA-like_sf