Gvermi13800.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi13800.t1
Unique NameGvermi13800.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length266
Homology
BLAST of Gvermi13800.t1 vs. uniprot
Match: A0A2V3IUX4_9FLOR (Cobalt-zinc-cadmium resistance protein CzcN n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUX4_9FLOR)

HSP 1 Score: 303 bits (775), Expect = 1.660e-100
Identity = 160/264 (60.61%), Postives = 192/264 (72.73%), Query Frame = 0
Query:    1 MFTAAFVSCFSAAPTRTHLLAPRNRNATNLRRRHISRRRVRMSADPEDLNSEPQAAKSTSTANAPSLDTDVFSRFVDTAXXXXXXXXXXXXDLDTNQFLDDAKQTSTGLVDNFLAGDWLNRGELYGALQLAFALLLLRGGGFLDLFVNFLAGPALFAVGAAISAKSVFDLGPKQLSIWPAPVPAGELKTDGLYEYVRHPMYAGVLLACAGFAVATASPSRVALTIAFGAFLLKKIDVEEQFLKDAYPGYDEYTQEVVFKLVPNL 264
            M + AFVS F    + T +      NA  LR     R  +RM+ DP+   S P A ++TS   APS DTDVFS+FVD+A            ++D  + +D+ KQ S GLVDNF+AGDWLNRGELYGA+QLAF + LLRGGG LD  VNFLAGPALF VGA IS K+VFDLG KQLSIWPAPVP GEL+T G YEYVRHPMY+GV+LA  GFAVAT SP+R+AL+IAF AFL KKIDVEEQFLKDAYPGY+EY++EV +K++P +
Sbjct:    1 MVSPAFVSSFLPRLSPTTVPTAFRHNAKPLRLCRAPRAPLRMNTDPDKPESNP-ANQTTSAFEAPSFDTDVFSKFVDSAQQKIDSFQQSVQEIDATEIVDNTKQASLGLVDNFIAGDWLNRGELYGAIQLAFVVFLLRGGGALDFLVNFLAGPALFFVGALISGKAVFDLGLKQLSIWPAPVPNGELQTSGAYEYVRHPMYSGVVLASVGFAVATGSPARLALSIAFAAFLSKKIDVEEQFLKDAYPGYEEYSEEVPYKMIPTI 263          
BLAST of Gvermi13800.t1 vs. uniprot
Match: R7QUE4_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QUE4_CHOCR)

HSP 1 Score: 245 bits (626), Expect = 1.540e-77
Identity = 123/215 (57.21%), Postives = 160/215 (74.42%), Query Frame = 0
Query:   51 SEPQAAKSTSTANAPSLDTDVFSRFVDTAXXXXXXXXXXXXDLDTNQFLDDAKQTSTGLVDNFLAGDWLNRGELYGALQLAFALLLLRGGGFLDLFVNFLAGPALFAVGAAISAKSVFDLGPKQLSIWPAPVPAGELKTDGLYEYVRHPMYAGVLLACAGFAVATASPSRVALTIAFGAFLLKKIDVEEQFLKDAYPGYDEYTQEVVFKLVPNLF 265
            S P+   +T T  APS DTDVFS FVD+A            ++D+++ +++AK+TSTGL+DN LAGDWLNRGELYG +QL F +LLLR  G LD  V+FL GP +   GA IS KS++DLG KQLSIWPAPVP G+LKT+GLYEYVRHPMY+G++LA AG++V+T SP+R+ALTIAF AFL KKI VEE++L + YP Y  Y  +V  K++P ++
Sbjct:   78 SSPEERPNT-TFEAPSFDTDVFSNFVDSAQSRIEDLQKQFSEVDSDELVENAKETSTGLIDNVLAGDWLNRGELYGGIQLVFVILLLRSPGGLDGLVSFLCGPLILFAGAFISGKSLWDLGRKQLSIWPAPVPNGDLKTNGLYEYVRHPMYSGLILASAGWSVSTGSPARLALTIAFAAFLAKKISVEEEYLLETYPEYSTYCDKVTNKILPGIY 291          
BLAST of Gvermi13800.t1 vs. uniprot
Match: A0A1X6NWT9_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NWT9_PORUM)

HSP 1 Score: 187 bits (476), Expect = 9.770e-55
Identity = 100/222 (45.05%), Postives = 141/222 (63.51%), Query Frame = 0
Query:   48 DLNSEPQAAKSTSTANA---PSLDTDVFSRFVDTAXXXXXXXXXXXXDLDTNQFLDDAKQTSTGLVDNFLAGDWLNRGELYGALQLAFALLLLRGGGFLDLFVNFLAGPALFAVGAAISAKSVFDLGPKQLSIWPAPVPAGELKTDGLYEYVRHPMYAGVLLACAGFAVATASPSRVALTIAFGAFLLKKIDVEEQFLKDAYPG-YDEYTQEVVFKLVPNLF 265
            D  +E  AA+S +       PSL+T +FS FVD              D+D  Q   ++  +   L DNFLAGDWLNRGEL+GA+QLAF  ++++    LD  V+F+ GP +   GA +S K  +DLG KQ+S+WPAPVP G LKT G+Y  +RHP+Y+G+LL+  G+A AT+S  R ALT A    L KKIDVEE+FL ++Y   Y++Y ++V +K++P +F
Sbjct:   87 DATAEAAAAESDAPVTEFQPPSLNTTIFSDFVDDFDSKLQSVKQKVADVDVQQIQGESSASLKALADNFLAGDWLNRGELWGAVQLAFVYMMVKESN-LDNVVSFIVGPVVLISGAILSVKGAWDLGRKQISLWPAPVPDGTLKTKGIYGVIRHPLYSGLLLSSLGYASATSSAERFALTFALAYVLRKKIDVEEKFLVESYGDEYEDYMEDVPYKIIPKVF 307          
BLAST of Gvermi13800.t1 vs. uniprot
Match: A0A7S1TEK5_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TEK5_9RHOD)

HSP 1 Score: 175 bits (443), Expect = 2.880e-50
Identity = 88/169 (52.07%), Postives = 112/169 (66.27%), Query Frame = 0
Query:   99 LDDAKQTSTG--LVDNFLAGDWLNRGELYGALQLAFALLLLRGGGFLDLFVNFLAGPALFAVGAAISAKSVFDLGPKQLSIWPAPVPAGELKTDGLYEYVRHPMYAGVLLACAGFAVATASPSRVALTIAFGAFLLKKIDVEEQFLKDAYPGYDEYTQEVVFKLVPNLF 265
            LD  K T+ G  LVDN + G+WL+RGE++G +QLA    LL+    +D   NFL GP     G A+  K+  DLG  Q+SIWP P P  EL+TDGLY+YVRHP+YAGVLLA  G+A AT SPSR  LT+ F  F  +KI VEE+FL++ Y GY  Y + V FKL+P +F
Sbjct:  100 LDADKVTAGGKKLVDNLIQGEWLSRGEVFGGIQLALLYFLLQDSRMMDGLANFLFGPICLLAGGAVCVKAFVDLGISQISIWPKPAPGAELRTDGLYQYVRHPIYAGVLLASLGWAGATHSPSRFLLTLGFAYFFARKIAVEEEFLEETYEGYKSYKEAVPFKLIPRIF 268          
BLAST of Gvermi13800.t1 vs. uniprot
Match: A0A7S1XJW4_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1XJW4_9RHOD)

HSP 1 Score: 172 bits (436), Expect = 1.480e-49
Identity = 90/204 (44.12%), Postives = 123/204 (60.29%), Query Frame = 0
Query:   65 PSLDTDV---FSRFVDTAXXXXXXXXXXXXDLDTNQFLDDAKQTSTGLVDNFLAGDWLNRGELYGALQLAFALLLLRGGGFLDLFVNFLAGPALFAVGAAISAKSVFDLGPKQLSIWPAPVPAGELKTDGLYEYVRHPMYAGVLLACAGFAVATASPSRVALTIAFGAFLLKKIDVEEQFLKDAYPGYDEYTQEVVFKLVPNLF 265
            P  D DV      +V+ A            D+D  +  ++A +    L +NFL G+WL RGE+YG  QL  ALL+L G   LD  V+F  GP     G A+S K++ DLG K LSIWP+PVP+  L T GLYE VRHP+Y+G LLA  GFA AT SP+R ALT+      +KKI++EE+FL++ +P Y  Y  +V +K++P +F
Sbjct:   38 PKRDVDVGGTVDEWVEKARNKAEDLEKYLSDIDGEELAENATEAGKLLANNFLGGEWLQRGEVYGGAQLVLALLVLNGQPLLDGLVSFALGPVTMVAGVALSIKALSDLGFKNLSIWPSPVPSNSLVTTGLYEKVRHPVYSGALLASLGFASATGSPARFALTLGLAYLFIKKIEIEEEFLEEKHPDYALYKVDVPYKILPKVF 241          
BLAST of Gvermi13800.t1 vs. uniprot
Match: A0A7S0BQP8_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BQP8_9RHOD)

HSP 1 Score: 171 bits (434), Expect = 6.080e-49
Identity = 109/267 (40.82%), Postives = 147/267 (55.06%), Query Frame = 0
Query:    6 FVSCFSAAPTRTHLLAPRNRNATNLRRRHISRRRVRMSADPEDLNS------EPQAAKSTSTANAPSLDTDVFSRFVDTAXXXXXXXXXXXXDLDTNQFLDDAKQTSTGLVDNFLAGDWLNRGELYGALQLAFALLLLRGGGFLDLFVNFLAGPALFAVGAAISAKSVFDLGPKQLSIWPAPVPAGELKTDGLYEYVRHPMYAGVLLACAGFAVATASPSRVALTIAFGAFLLKKIDVEEQFLKDAY-PGYDEYTQEVVFKLVPNLF 265
            FV  F+    R    A  +R+A    RR + R      A  E+ +       EPQ   ST    +  L   V +  V+              ++D  +  + A  +S  L++NFL+GDWL RGE YG LQL  AL+LLR  G LD  V F+ GP L   GA +  KSV DLG  QLSIWP P P   L+T+G+Y  VRHP+Y+GVLL+  G+AVAT SP+R+ALT A   F ++KI +EE+FL++ Y   Y +Y + V FKL P +F
Sbjct:    4 FVGTFAVRSGRVGS-AVSSRSAKVSLRRQVVRAMAESKAAEENKSKLEIEEVEPQKVSSTPEYGSQEL---VSADLVEKLQSKFDESLTQIKNIDVEELGETATGSSKTLLNNFLSGDWLQRGETYGFLQLGLALMLLRPQGGLDGLVTFMFGPVLLLGGAFVCVKSVLDLGLGQLSIWPKPTPDSVLRTEGIYAQVRHPIYSGVLLSTIGYAVATGSPARMALTGALAYFFMRKIQIEEEFLEEKYGDDYTDYQENVPFKLFPKVF 266          
BLAST of Gvermi13800.t1 vs. uniprot
Match: A0A5J4YSJ9_PORPP (Cobalt-zinc-cadmium resistance protein CzcN n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YSJ9_PORPP)

HSP 1 Score: 167 bits (424), Expect = 2.980e-47
Identity = 85/173 (49.13%), Postives = 110/173 (63.58%), Query Frame = 0
Query:   93 LDTNQFLDDAKQTSTGLVDNFLAGDWLNRGELYGALQLAFALLLLRGGGFLDLFVNFLAGPALFAVGAAISAKSVFDLGPKQLSIWPAPVPAGELKTDGLYEYVRHPMYAGVLLACAGFAVATASPSRVALTIAFGAFLLKKIDVEEQFLKDAYPGYDEYTQEVVFKLVPNLF 265
            +D +  +DD  + ST L DNF+AG+WL RGE+YGA QL  A ++L G   +D   + L GP LF  GA +S K++ DLG   LS+WP PV  G L T GLYE VRHP+Y+GVLL   G A AT S    ALT A  A  +KKI+VEE+FLK+ YP Y  Y     +KL+P ++
Sbjct:  110 VDPDAVVDDIGKASTTLFDNFMAGEWLKRGEVYGAAQLVLAFMMLTGQPLVDALASLLLGPGLFISGAVLSGKALVDLGIPNLSLWPRPVSKGTLVTTGLYEKVRHPVYSGVLLVSLGNAAATHSAGSFALTAALAALFVKKIEVEEEFLKEKYPEYSSYQISTPYKLIPKVW 282          
BLAST of Gvermi13800.t1 vs. uniprot
Match: M2W2N2_GALSU (Protein-S-isoprenylcysteine O-methyltransferase n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2W2N2_GALSU)

HSP 1 Score: 144 bits (364), Expect = 2.580e-38
Identity = 76/168 (45.24%), Postives = 107/168 (63.69%), Query Frame = 0
Query:   99 LDDAKQTSTGLVDNFLAGDWLNRGELYGALQLAFALLLLRGGGFLDLFVNFLAGPALFAVGAAISAKSVFDLGPKQLSIWPAPVPAGELKTDGLYEYVRHPMYAGVLLACAGFAVATASPSRVALTIAFGAFLLKKIDVEEQFLKDAY-PGYDEYTQEVVFKLVPNLF 265
            LD AK T+  L  N  AG+ L+RGE Y ALQL   LL+LR  G  D  +NF+ GP     G +I  K+  DLG +QL+ WPAPVP  +L+T+GLY +VRHPMY GV+LA  GF+  T S  R+ L++     L+KK++VEE FL+  +   Y  Y ++V ++++P +F
Sbjct:  115 LDQAKATAKVLWANLAAGEALSRGEPYAALQLIVLLLILREPGSTDALINFILGPCTLITGLSILFKAAVDLGKEQLTPWPAPVPQSQLRTEGLYRFVRHPMYLGVVLASFGFSGTTNSSERLLLSLGLLYLLIKKVEVEETFLEKKFGEEYKSYREKVPYRIIPKVF 282          
BLAST of Gvermi13800.t1 vs. uniprot
Match: A0A2V3ICI6_9FLOR (Cobalt-zinc-cadmium resistance protein CzcN n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ICI6_9FLOR)

HSP 1 Score: 137 bits (344), Expect = 1.240e-37
Identity = 64/95 (67.37%), Postives = 78/95 (82.11%), Query Frame = 0
Query:  170 LGPKQLSIWPAPVPAGELKTDGLYEYVRHPMYAGVLLACAGFAVATASPSRVALTIAFGAFLLKKIDVEEQFLKDAYPGYDEYTQEVVFKLVPNL 264
            +G KQLSIWPAPVP GEL+T   YEYVRHPMY+ V+LA  GF VAT SP+R+AL+IAF AF  + IDVEEQFLKDAYPGY+EY++EV  K++P +
Sbjct:    1 MGLKQLSIWPAPVPNGELRTSEAYEYVRHPMYSDVVLASVGFVVATGSPARLALSIAFAAFSSRNIDVEEQFLKDAYPGYEEYSEEVPHKMIPTI 95          
BLAST of Gvermi13800.t1 vs. uniprot
Match: A0A1Z5KFP6_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KFP6_FISSO)

HSP 1 Score: 111 bits (278), Expect = 1.150e-25
Identity = 67/171 (39.18%), Postives = 98/171 (57.31%), Query Frame = 0
Query:   94 DTNQFLDDAKQTSTGLVDNFLAGDWLNRGELYGALQLAFALLLLRGG-GFLDLFVNFLAGPALFAVGAAISAKSVFDLGPKQLSIWPAPVPAGELKTDGLYEYVRHPMYAGVLLACAGFAVATASPSRVALTIAFGAFLLKKIDVEEQFLKDAYPGYDEYTQEVVFKLVPN 263
            DTN+ +    ++S  L +N ++G++  RGE Y   Q +    ++ G   FL   ++ + GP L   G A+   +V D+G   LS WP P    ELKTDG+Y  VRHPMYAGVL ACAG+++ T S  R+ LT+A    L +K + EE+ L+ A+P Y  Y + V  K  P+
Sbjct:   99 DTNKIM----ESSNALKENLMSGEFGTRGEGYVVAQFSLMAFIVVGTVPFLGDLLSIVLGPGLLLTGLAVMVLAVQDIGG-ALSPWPVPSDNAELKTDGIYGQVRHPMYAGVLAACAGYSLMTGSAWRLLLTVALWKVLEEKSNYEEEQLQQAFPAYKAYQKLVPGKFFPS 264          
The following BLAST results are available for this feature:
BLAST of Gvermi13800.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IUX4_9FLOR1.660e-10060.61Cobalt-zinc-cadmium resistance protein CzcN n=1 Ta... [more]
R7QUE4_CHOCR1.540e-7757.21Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A1X6NWT9_PORUM9.770e-5545.05Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A7S1TEK5_9RHOD2.880e-5052.07Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7S1XJW4_9RHOD1.480e-4944.12Hypothetical protein n=1 Tax=Erythrolobus australi... [more]
A0A7S0BQP8_9RHOD6.080e-4940.82Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A5J4YSJ9_PORPP2.980e-4749.13Cobalt-zinc-cadmium resistance protein CzcN n=1 Ta... [more]
M2W2N2_GALSU2.580e-3845.24Protein-S-isoprenylcysteine O-methyltransferase n=... [more]
A0A2V3ICI6_9FLOR1.240e-3767.37Cobalt-zinc-cadmium resistance protein CzcN n=2 Ta... [more]
A0A1Z5KFP6_FISSO1.150e-2539.18Uncharacterized protein n=1 Tax=Fistulifera solari... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 76..96
NoneNo IPR availableGENE3D1.20.120.1630coord: 111..264
e-value: 7.1E-21
score: 76.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 24..63
NoneNo IPR availablePANTHERPTHR12714PROTEIN-S ISOPRENYLCYSTEINE O-METHYLTRANSFERASEcoord: 76..262
NoneNo IPR availablePANTHERPTHR12714:SF21S-ISOPRENYLCYSTEINE O-METHYLTRANSFERASEcoord: 76..262
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 18..265
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..12
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..17
IPR007318Phospholipid methyltransferasePFAMPF04191PEMTcoord: 148..246
e-value: 5.8E-12
score: 46.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_647contigScGOVlb_647:188515..189312 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi13800.t1Gvermi13800.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_647 188515..189312 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi13800.t1 ID=Gvermi13800.t1|Name=Gvermi13800.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=266bp
MFTAAFVSCFSAAPTRTHLLAPRNRNATNLRRRHISRRRVRMSADPEDLN
SEPQAAKSTSTANAPSLDTDVFSRFVDTAQQKIDDVQQSIQDLDTNQFLD
DAKQTSTGLVDNFLAGDWLNRGELYGALQLAFALLLLRGGGFLDLFVNFL
AGPALFAVGAAISAKSVFDLGPKQLSIWPAPVPAGELKTDGLYEYVRHPM
YAGVLLACAGFAVATASPSRVALTIAFGAFLLKKIDVEEQFLKDAYPGYD
EYTQEVVFKLVPNLF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007318Phopholipid_MeTrfase