Gvermi13259.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi13259.t1
Unique NameGvermi13259.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length128
Homology
BLAST of Gvermi13259.t1 vs. uniprot
Match: A0A2V3J6Y9_9FLOR (Beta,beta-carotene 9',10'-oxygenase n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6Y9_9FLOR)

HSP 1 Score: 107 bits (266), Expect = 1.680e-24
Identity = 53/115 (46.09%), Postives = 74/115 (64.35%), Query Frame = 0
Query:    2 IAKHAGDFPVISPDNELSQHRFVYTTVNTDGISAAVVQKTDLKTGATKRFGLQNCMFSELSFVPNPSGNAEDDGSLITVALNSATRKSTVIVLDARTFHEVSRAELPIGMPLGIH 116
            +++ AGD P ISP  +   +R+VYT    + + A  VQK D+ TG   RF     +  E  FVP+PS  AEDDG ++ +ALN+ TR S +IVLDA+ F E+S+AELP+ MP G+H
Sbjct:  450 VSETAGDMPTISPLFKQKDYRYVYTLAFYENVMAGSVQKIDVTTGEAIRFVKPGHILGEPMFVPSPSSTAEDDGCVLVLALNTITRNSAMIVLDAKEFVEISQAELPVAMPSGLH 564          
BLAST of Gvermi13259.t1 vs. uniprot
Match: R7QAZ4_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QAZ4_CHOCR)

HSP 1 Score: 79.7 bits (195), Expect = 5.330e-15
Identity = 43/122 (35.25%), Postives = 67/122 (54.92%), Query Frame = 0
Query:    1 MIAKHAGDFPVISPDNELSQHRFVYTTVNTDGIS-AAVVQKTDLKTGATKRFGLQNCMFSELSFVPNPSGNAEDDGSLITVALNSATRKSTVIVLDARTFHEVSRAELPIGMPLGIHTGIHS 121
            ++A  A +F  +SP      + +V+   + DG   ++ + K ++ TG    + L    F E  FVP+PSGN ED G L+ +AL+     S ++VLDAR   EV+RAELP+ +P   H   H+
Sbjct:  269 VLADVALEFATVSPRKRERPYHYVFGVSDNDGKQFSSSIAKVNVDTGIVTSYVLPQRTFGEPIFVPDPSGNEEDAGCLVVLALDDLKDSSALLVLDARAMTEVARAELPMRLPPSFHGAFHT 390          
BLAST of Gvermi13259.t1 vs. uniprot
Match: A0A3R7JZA7_9EURY (Beta-carotene 15,15'-monooxygenase n=4 Tax=Halorubrum TaxID=56688 RepID=A0A3R7JZA7_9EURY)

HSP 1 Score: 77.0 bits (188), Expect = 6.040e-14
Identity = 45/113 (39.82%), Postives = 60/113 (53.10%), Query Frame = 0
Query:   10 PVISPDNELSQHRFVYTTVNTDGISAAVVQ------KTDLKTGATKRFGLQNCMFSELSFVPNPSGNAEDDGSLITVALNSATRKSTVIVLDARTFHEVSRAELPIGMPLGIH 116
            P  SP     +HR+VY      G+ A V +      K D +TGAT+ FG +   F E  FVP P G+ EDDG ++TVAL++   +S + VLD  T  E +RA LP   P   H
Sbjct:  370 PTASPARWCREHRYVYAM----GMDAPVTEWARRVVKLDAETGATRTFGDRGDYFGEPVFVPAPDGDGEDDGVVLTVALDADADRSRLFVLDGETLAERARATLPHAAPFDFH 478          
BLAST of Gvermi13259.t1 vs. uniprot
Match: A0A179F4L7_METCM (Carotenoid oxygenase 2 n=2 Tax=Metacordyceps chlamydosporia TaxID=280754 RepID=A0A179F4L7_METCM)

HSP 1 Score: 77.0 bits (188), Expect = 6.280e-14
Identity = 45/118 (38.14%), Postives = 65/118 (55.08%), Query Frame = 0
Query:    5 HAGDFPVISPDNELSQHRFVYTTVNTD-GISAAVVQKTDLKTGATKRF-GLQNCMFSELSFVPNPSGNAEDDGSLITVALNSATRKSTVIVLDARTFHEVSRAELPIGMPLGIHTGIH 120
            HAG+ P I+P     +H++VY+  N   G     + KTD++T     + G       E  FVP P G  EDDG ++TV L+S++R S  + LDA+T  E+ RAE    +PL +H G H
Sbjct:  454 HAGELPTINPSRAGQRHKYVYSICNRGIGFWMDAIVKTDVETREALIWSGPVGHTPGEPIFVPRPGGTDEDDGVILTVVLDSSSRTSYFLCLDAKTLQELGRAEADFTIPLALH-GAH 570          
BLAST of Gvermi13259.t1 vs. uniprot
Match: V4XQN4_9ARCH (Lignostilbene-alpha,beta-dioxygenase related enzyme n=1 Tax=uncultured archaeon A07HR67 TaxID=1412871 RepID=V4XQN4_9ARCH)

HSP 1 Score: 75.9 bits (185), Expect = 1.530e-13
Identity = 44/118 (37.29%), Postives = 60/118 (50.85%), Query Frame = 0
Query:    1 MIAKHAGDFPVISPDNELSQHRFVYTTVNTDGIS--AAVVQKTDLKTGATKRFGLQNCMFSELSFVPNPSGNAEDDGSLITVALNSATRKSTVIVLDARTFHEVSRAELPIGMPLGIH 116
            MI       P +SP      HR+VY       ++  A  V K D  +G  +RF      F E  FVP P G+AEDDG ++TVAL++   +S ++VLD  TF E +R  LP  +P   H
Sbjct:  359 MIYTDGSALPTVSPTRWCRPHRYVYAMGLDTPVTEWARRVVKLDTHSGTVQRFDAGGDYFIEPVFVPAPDGDAEDDGVVVTVALDTEADRSRLLVLDGDTFEERARTPLPHAVPFDFH 476          
BLAST of Gvermi13259.t1 vs. uniprot
Match: A0A4U5JGG0_9EURY (Carotenoid oxygenase family protein n=1 Tax=Natronomonas salsuginis TaxID=2217661 RepID=A0A4U5JGG0_9EURY)

HSP 1 Score: 75.5 bits (184), Expect = 2.100e-13
Identity = 42/118 (35.59%), Postives = 60/118 (50.85%), Query Frame = 0
Query:    1 MIAKHAGDFPVISPDNELSQHRFVYTTVNTDGIS--AAVVQKTDLKTGATKRFGLQNCMFSELSFVPNPSGNAEDDGSLITVALNSATRKSTVIVLDARTFHEVSRAELPIGMPLGIH 116
            ++++     P +SP      HR+VY       ++  A  + K D +TGA K F      F E  FVP P   AEDDG ++TVAL++   +S ++VLD  TF E +R  LP   P   H
Sbjct:  362 LLSEDGTALPTVSPSRWCRPHRYVYAMGMDTPVTEWAQRILKLDTRTGALKAFDEGGEYFGEPIFVPAPDAEAEDDGVVLTVALDTTANRSRLLVLDGETFSERARITLPHAAPFDFH 479          
BLAST of Gvermi13259.t1 vs. uniprot
Match: A0A0E3TSU5_MYCCH (Dioxygenase n=30 Tax=Mycobacteriaceae TaxID=1762 RepID=A0A0E3TSU5_MYCCH)

HSP 1 Score: 73.9 bits (180), Expect = 7.300e-13
Identity = 41/114 (35.96%), Postives = 60/114 (52.63%), Query Frame = 0
Query:    8 DFPVISPDNELSQHRFVYT-----TVNTDGISAAVVQKTDLKTGATKRFGLQNCMFSELSFVPNPSGNAEDDGSLITVALNSATRKSTVIVLDARTFHEVSRAELPIGMPLGIH 116
            +FP I+ +    +HR+ Y         +DG     + K D +TG   R  L +    E+SFVPNPSG AEDDG L+   L++ T +   +VLDA+T    +  +LP  +P G H
Sbjct:  378 EFPRINEELTGKKHRYGYLPCIAGAFESDGKVDGSLVKFDYQTGTDSRTTLDSLAVGEMSFVPNPSGTAEDDGVLVGFGLSAGTSQGKFVVLDAQTLELAATVDLPQRVPAGFH 491          
BLAST of Gvermi13259.t1 vs. uniprot
Match: UPI001E4EFF94 (carotenoid oxygenase family protein n=1 Tax=Haladaptatus sp. DYF46 TaxID=2886041 RepID=UPI001E4EFF94)

HSP 1 Score: 73.6 bits (179), Expect = 9.810e-13
Identity = 41/111 (36.94%), Postives = 61/111 (54.95%), Query Frame = 0
Query:   10 PVISPDNELSQHRFVYTTVNTDGISA--AVVQKTDLKTGATKRFG--LQNCMFSELSFVPNPSGNAEDDGSLITVALNSATRKSTVIVLDARTFHEVSRAELPIGMPLGIH 116
            P +SP      HR+VY       ++     V K D +TG    F    ++  FSE  FVPNP G  ED+G ++TVAL+  T +S+V+V+D  +F E++RA +P  +P   H
Sbjct:  354 PTVSPARWCRDHRYVYAQSPDQPMTTWPQAVAKIDTETGRAVEFADDPEDRYFSEPIFVPNPDGEREDEGVVLTVALDPETERSSVVVIDGDSFAELARATVPHPIPFDFH 464          
BLAST of Gvermi13259.t1 vs. uniprot
Match: UPI001F39F62F (carotenoid oxygenase family protein n=1 Tax=Halobaculum sp. CBA1158 TaxID=2904243 RepID=UPI001F39F62F)

HSP 1 Score: 71.2 bits (173), Expect = 6.430e-12
Identity = 41/109 (37.61%), Postives = 56/109 (51.38%), Query Frame = 0
Query:   10 PVISPDNELSQHRFVYTTVNTDGIS--AAVVQKTDLKTGATKRFGLQNCMFSELSFVPNPSGNAEDDGSLITVALNSATRKSTVIVLDARTFHEVSRAELPIGMPLGIH 116
            P +SP     +HR+VY       ++  A  V K D++TG    F      F E  FVPNP+G+AEDDG +  V L     +S+++VLD  TF E +R  LP   P   H
Sbjct:  379 PTVSPAAWCRRHRYVYAMSTDRPVNEWARAVLKLDVETGTVTEFD-DGGYFGEPVFVPNPAGDAEDDGVVCAVTLEPDADQSSLVVLDGETFAERARVRLPHAAPFDFH 486          
BLAST of Gvermi13259.t1 vs. uniprot
Match: A0A1S3H7W6_LINUN (beta,beta-carotene 15,15'-dioxygenase n=2 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3H7W6_LINUN)

HSP 1 Score: 71.2 bits (173), Expect = 6.490e-12
Identity = 38/112 (33.93%), Postives = 69/112 (61.61%), Query Frame = 0
Query:    7 GDFPVISPDNELS-QHRFVYTTVNTD-GISAAVVQKTDLKTGATKRFGLQNCMFSELSFVPNPSGNAEDDGSLITVALNSATRKSTVIVLDARTFHEVSRAELPIGMPLGIH 116
             +FP ++ D     ++R++Y+   +D G     + KTD++   T+ +  + C F+E  FVP+P+ + EDDG +++ A+++A  K+ ++VLDA+TF E+ RAE  +  P G H
Sbjct:  397 SEFPTVNYDQMNGVKYRYMYSVTFSDTGEFGHGLVKTDVQAKTTQEWTEEGCCFTEPWFVPSPNSDGEDDGVILS-AVHNAQMKTYLLVLDAKTFTELGRAEFDVAPPTGFH 507          
The following BLAST results are available for this feature:
BLAST of Gvermi13259.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J6Y9_9FLOR1.680e-2446.09Beta,beta-carotene 9',10'-oxygenase n=2 Tax=Gracil... [more]
R7QAZ4_CHOCR5.330e-1535.25Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A3R7JZA7_9EURY6.040e-1439.82Beta-carotene 15,15'-monooxygenase n=4 Tax=Halorub... [more]
A0A179F4L7_METCM6.280e-1438.14Carotenoid oxygenase 2 n=2 Tax=Metacordyceps chlam... [more]
V4XQN4_9ARCH1.530e-1337.29Lignostilbene-alpha,beta-dioxygenase related enzym... [more]
A0A4U5JGG0_9EURY2.100e-1335.59Carotenoid oxygenase family protein n=1 Tax=Natron... [more]
A0A0E3TSU5_MYCCH7.300e-1335.96Dioxygenase n=30 Tax=Mycobacteriaceae TaxID=1762 R... [more]
UPI001E4EFF949.810e-1336.94carotenoid oxygenase family protein n=1 Tax=Halada... [more]
UPI001F39F62F6.430e-1237.61carotenoid oxygenase family protein n=1 Tax=Haloba... [more]
A0A1S3H7W6_LINUN6.490e-1233.93beta,beta-carotene 15,15'-dioxygenase n=2 Tax=Ling... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004294Carotenoid oxygenasePFAMPF03055RPE65coord: 3..116
e-value: 1.6E-27
score: 96.7
IPR004294Carotenoid oxygenasePANTHERPTHR10543BETA-CAROTENE DIOXYGENASEcoord: 6..120
NoneNo IPR availablePANTHERPTHR10543:SF24BETA,BETA-CAROTENE 15,15'-DIOXYGENASEcoord: 6..120

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_6345contigScGOVlb_6345:461..844 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi13259.t1Gvermi13259.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_6345 461..844 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi13259.t1 ID=Gvermi13259.t1|Name=Gvermi13259.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=128bp
MIAKHAGDFPVISPDNELSQHRFVYTTVNTDGISAAVVQKTDLKTGATKR
FGLQNCMFSELSFVPNPSGNAEDDGSLITVALNSATRKSTVIVLDARTFH
EVSRAELPIGMPLGIHTGIHSIESLSS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004294Carotenoid_Oase