Gvermi13677.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi13677.t1
Unique NameGvermi13677.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length271
Homology
BLAST of Gvermi13677.t1 vs. uniprot
Match: A0A1Z1MHI5_MELHR (Tryptophan synthase alpha chain n=1 Tax=Melanothamnus harveyi TaxID=397005 RepID=A0A1Z1MHI5_MELHR)

HSP 1 Score: 514 bits (1323), Expect = 9.610e-184
Identity = 266/270 (98.52%), Postives = 268/270 (99.26%), Query Frame = 0
Query:    1 MNHISSILKNNYQKSVCSFIPFITAGYPNIDLTLDALVELDKQGADAIELGVPYSDALADGPLIQEASKVSIQNGTNLSSVFTILKKVNGVINTPIIIFTYYNPILVRGIKSFITEIAILGAKGLIIPDLPLEESVYVNYLCKMSNIELILFISPTSSDERILDIVNKSSGCLYLVSSTGVTGIRDTIDKSINRISNDILIDSGKMVILGFGIAYPDHIKQIMKSNISINGFVVGSAFTRILSTYIYSGNKNVINDIGRFCAQMKSATLK 270
            MNHISSILKNNYQKSVCSFIPFITAGYPNIDLTLDALVELDKQGADAIELGVPYSDALADGPLIQEASKVSIQNGTNLSSVFTILKKVNGVI+TPIIIFTYYNPILVRGIKSFI EIAILGAKGLIIPDLPLEESVYVNYLCK+SNIELILFISPTSSDERILDIVNKSSGCLYLVSSTGVTGIRDTIDKSINRISNDILIDSGKMVILGFGIAYPDHIKQIMKSNISINGFVVGSAFTRILSTYI SGNKNVINDIGRFCAQMKSATLK
Sbjct:    1 MNHISSILKNNYQKSVCSFIPFITAGYPNIDLTLDALVELDKQGADAIELGVPYSDALADGPLIQEASKVSIQNGTNLSSVFTILKKVNGVISTPIIIFTYYNPILVRGIKSFIAEIAILGAKGLIIPDLPLEESVYVNYLCKISNIELILFISPTSSDERILDIVNKSSGCLYLVSSTGVTGIRDTIDKSINRISNDILIDSGKMVILGFGIAYPDHIKQIMKSNISINGFVVGSAFTRILSTYICSGNKNVINDIGRFCAQMKSATLK 270          
BLAST of Gvermi13677.t1 vs. uniprot
Match: A0A1Z1MA97_9FLOR (Tryptophan synthase alpha chain n=1 Tax=Leptosiphonia brodiei TaxID=2608611 RepID=A0A1Z1MA97_9FLOR)

HSP 1 Score: 380 bits (977), Expect = 5.020e-131
Identity = 192/271 (70.85%), Postives = 231/271 (85.24%), Query Frame = 0
Query:    1 MNHISSILKNNYQKSVCSFIPFITAGYPNIDLTLDALVELDKQGADAIELGVPYSDALADGPLIQEASKVSIQNGTNLSSVFTILKKVNGVINTPIIIFTYYNPILVRGIKSFITEIAILGAKGLIIPDLPLEESVYVNYLCKMSNIELILFISPTSSDERILDIVNKSSGCLYLVSSTGVTGIRDTIDKSINRISNDILIDSGKMVILGFGIAYPDHIKQIMKSNISINGFVVGSAFTRILSTYIYSG-NKNVINDIGRFCAQMKSATLK 270
            MN IS++L  NY++SVCSFIPFITAGYPN+DLTL+ L ELDKQG DAIELGVPYSDALADG LIQEASKV+I NG NL +VF ILKK  G+I+TPIIIF+YYNPILVRGIKSFI EIA L  KGL+IPDLP+EE+ Y+  LCK+S IELILFISPTSS+ RIL+I+ KS GCLYLVSSTGVTGIRD+ID +IN+I+N+ILI S KM++LGFGIA P+H++ I+KS+I I+G VVGSAFT+ILS Y  S  NK+++ ++G FC QMKSA +K
Sbjct:    1 MNDISNVLHENYKRSVCSFIPFITAGYPNLDLTLEILYELDKQGVDAIELGVPYSDALADGILIQEASKVAINNGVNLDTVFFILKKTFGIISTPIIIFSYYNPILVRGIKSFIHEIASLNVKGLVIPDLPIEEADYILNLCKISQIELILFISPTSSNSRILNIIKKSPGCLYLVSSTGVTGIRDSIDSNINKIANEILIHSNKMIMLGFGIAKPEHVQDILKSDIGIHGIVVGSAFTKILSKYNNSDKNKDIVREVGSFCVQMKSAAVK 271          
BLAST of Gvermi13677.t1 vs. uniprot
Match: A0A1Z1MSK4_9FLOR (Tryptophan synthase alpha chain n=1 Tax=Kapraunia schneideri TaxID=717899 RepID=A0A1Z1MSK4_9FLOR)

HSP 1 Score: 370 bits (950), Expect = 6.210e-127
Identity = 187/270 (69.26%), Postives = 223/270 (82.59%), Query Frame = 0
Query:    1 MNHISSILKNNYQKSVCSFIPFITAGYPNIDLTLDALVELDKQGADAIELGVPYSDALADGPLIQEASKVSIQNGTNLSSVFTILKKVNGVINTPIIIFTYYNPILVRGIKSFITEIAILGAKGLIIPDLPLEESVYVNYLCKMSNIELILFISPTSSDERILDIVNKSSGCLYLVSSTGVTGIRDTIDKSINRISNDILIDSGKMVILGFGIAYPDHIKQIMKSNISINGFVVGSAFTRILSTYIYSGNKNVINDIGRFCAQMKSATLK 270
            MN+IS++L+ N   SVCSFIPFITAGYP+I+LTL+AL+ELDKQGADAIELG+PYSDALADGPLIQEASK +I+NG N+ S+F IL+KVN  I  PIIIFTYYNPILV+G++SFI EIA LG KGLIIPDLPLEES YV YLCK + IELILFISPTS  +RILDI+ KS GCLYLVSSTGVTGIR+ ++ +IN+   + L+ + KM+ILGFGI+ PD +  I+K N  +NG VVGSAFT+I STYI + N NV+ DIG FC QMKSAT K
Sbjct:    1 MNYISNVLQKNCTNSVCSFIPFITAGYPSINLTLEALIELDKQGADAIELGIPYSDALADGPLIQEASKCAIENGVNIQSIFDILQKVNNKIKAPIIIFTYYNPILVKGLESFICEIADLGVKGLIIPDLPLEESDYVIYLCKCNKIELILFISPTSCYKRILDIIKKSPGCLYLVSSTGVTGIRENLNGNINKSIYEALMMTDKMIILGFGISTPDQVDNILKFNSRVNGIVVGSAFTKIFSTYINNSNINVVRDIGSFCHQMKSATCK 270          
BLAST of Gvermi13677.t1 vs. uniprot
Match: A0A8E6L6Z3_9FLOR (Tryptophan synthase alpha subunit n=1 Tax=Erythrocystis saccata TaxID=2822695 RepID=A0A8E6L6Z3_9FLOR)

HSP 1 Score: 361 bits (926), Expect = 2.880e-123
Identity = 183/268 (68.28%), Postives = 221/268 (82.46%), Query Frame = 0
Query:    1 MNHISSILKNNYQKSVCSFIPFITAGYPNIDLTLDALVELDKQGADAIELGVPYSDALADGPLIQEASKVSIQNGTNLSSVFTILKKVNGVINTPIIIFTYYNPILVRGIKSFITEIAILGAKGLIIPDLPLEESVYVNYLCKMSNIELILFISPTSSDERILDIVNKSSGCLYLVSSTGVTGIRDTIDKSINRISNDILIDSGKMVILGFGIAYPDHIKQIMKSNISINGFVVGSAFTRILSTYIYSGNKNVINDIGRFCAQMKSAT 268
            MN IS +L+ NY+KSVCSFIPFITAGYPNI+LTL  + ELD QGADAIELGVPYSDALADG LIQEASKV+I NG +L  V  ILKK++  IN PIIIF+YYNPIL RG+KSFIT+IA    KGLIIPDLPLEE+ Y+ +LC++S IELI FISPTSS+ RI  I+ KS GCLYLVSSTGVTGIRD+ID +I+ IS+ IL+ S KMV+LGFGI+ PDHI  I+KSN +I+G VVGSAFT+ILS ++ + N +++ +IG FC+QMKSAT
Sbjct:    1 MNDISKVLQKNYKKSVCSFIPFITAGYPNINLTLKIIKELDHQGADAIELGVPYSDALADGNLIQEASKVAINNGVSLDKVLFILKKIHSQINAPIIIFSYYNPILARGVKSFITDIACFNVKGLIIPDLPLEEADYIIHLCQLSKIELIFFISPTSSNNRINKIIKKSPGCLYLVSSTGVTGIRDSIDTNISEISDRILVYSNKMVMLGFGISKPDHINSIIKSNKNIHGIVVGSAFTKILSNHVNNENIDIVKEIGCFCSQMKSAT 268          
BLAST of Gvermi13677.t1 vs. uniprot
Match: A0A1Z1MBZ4_9FLOR (Tryptophan synthase alpha chain n=1 Tax=Polysiphonia elongata TaxID=159753 RepID=A0A1Z1MBZ4_9FLOR)

HSP 1 Score: 351 bits (901), Expect = 1.640e-119
Identity = 179/269 (66.54%), Postives = 222/269 (82.53%), Query Frame = 0
Query:    1 MNHISSILKNNYQKSVCSFIPFITAGYPNIDLTLDALVELDKQGADAIELGVPYSDALADGPLIQEASKVSIQNGTNLSSVFTILKKVNGVINTPIIIFTYYNPILVRGIKSFITEIAILGAKGLIIPDLPLEESVYVNYLCKMSNIELILFISPTSSDERILDIVNKSSGCLYLVSSTGVTGIRDTIDKSINRISNDILIDSGKMVILGFGIAYPDHIKQIMKSNISINGFVVGSAFTRILSTYIYSGNKNVINDIGRFCAQMKSATL 269
            MN+IS++L  N+  SVCS IPFITAGYP+ID+TL  L ELD+QG DAIELGVPYSD+LADG LIQEASKV+I+NG  L ++F ILK + G IN PIIIF+YYNPIL RGIKSFI+EIA    +GLIIPDLPLEE+ Y+  LCK+S IELILFISPTSSD+RI +I+ KS GCLYLVSSTGVTGIRD+ID ++N+IS++ILI + KMV+LGFGI+ P  +++I+KSN SI+G VVGSAFT+ILS  + + N+N++ +I  FC  MKSATL
Sbjct:    1 MNYISNVLYENHSNSVCSLIPFITAGYPSIDITLQVLKELDQQGVDAIELGVPYSDSLADGILIQEASKVAIKNGVTLDTIFYILKNIYGQINAPIIIFSYYNPILARGIKSFISEIADFNVRGLIIPDLPLEEADYIINLCKLSQIELILFISPTSSDDRIANIIKKSPGCLYLVSSTGVTGIRDSIDSNVNKISDEILIHTDKMVMLGFGISEPYQVQKIIKSNTSIHGIVVGSAFTKILS--LDNQNRNILQEIRSFCRAMKSATL 267          
BLAST of Gvermi13677.t1 vs. uniprot
Match: A0A1Z1ME14_9FLOR (Tryptophan synthase alpha chain n=1 Tax=Polysiphonia infestans TaxID=2006978 RepID=A0A1Z1ME14_9FLOR)

HSP 1 Score: 350 bits (899), Expect = 3.550e-119
Identity = 180/268 (67.16%), Postives = 216/268 (80.60%), Query Frame = 0
Query:    1 MNHISSILKNNYQKSVCSFIPFITAGYPNIDLTLDALVELDKQGADAIELGVPYSDALADGPLIQEASKVSIQNGTNLSSVFTILKKVNGVINTPIIIFTYYNPILVRGIKSFITEIAILGAKGLIIPDLPLEESVYVNYLCKMSNIELILFISPTSSDERILDIVNKSSGCLYLVSSTGVTGIRDTIDKSINRISNDILIDSGKMVILGFGIAYPDHIKQIMKSNISINGFVVGSAFTRILSTYIYSGNKNVINDIGRFCAQMKSAT 268
            MNHIS++L  N+++S  SFIPFITAGYP+ID TL AL+ELDK+GAD IELGVPYSDALADG LIQEASKV+I+NG NLS++  ILKK+   INTPIIIFTYYNPILV+GI SFI EI+ L  KG+IIPDLPLEE+ YV  LCK   IELILF+SPTSSD RI DIV KS GCLYLVSSTG+TG+R+++D SIN+ISN I     KM++LGFGIA P+ ++ I++SN SING VVGSAFT+ILS Y    N  ++  +G FC +MKSAT
Sbjct:    1 MNHISNVLAENHKRSSYSFIPFITAGYPSIDFTLKALIELDKRGADVIELGVPYSDALADGDLIQEASKVAIKNGVNLSTITMILKKIYLKINTPIIIFTYYNPILVKGINSFICEISSLNVKGIIIPDLPLEEADYVIALCKSKQIELILFVSPTSSDSRICDIVKKSPGCLYLVSSTGLTGMRESLDNSINQISNKISSKGNKMIMLGFGIASPEQVRIIIESNKSINGIVVGSAFTQILSNYKNDKNCYLVRKVGEFCLKMKSAT 268          
BLAST of Gvermi13677.t1 vs. uniprot
Match: A0A1Z1MI39_9FLOR (Tryptophan synthase alpha chain n=1 Tax=Vertebrata australis TaxID=2006943 RepID=A0A1Z1MI39_9FLOR)

HSP 1 Score: 348 bits (892), Expect = 4.110e-118
Identity = 173/269 (64.31%), Postives = 221/269 (82.16%), Query Frame = 0
Query:    1 MNHISSILKNNYQKSVCSFIPFITAGYPNIDLTLDALVELDKQGADAIELGVPYSDALADGPLIQEASKVSIQNGTNLSSVFTILKKVNGVINTPIIIFTYYNPILVRGIKSFITEIAILGAKGLIIPDLPLEESVYVNYLCKMSNIELILFISPTSSDERILDIVNKSSGCLYLVSSTGVTGIRDTIDKSINRISNDILIDSGKMVILGFGIAYPDHIKQIMKSNISINGFVVGSAFTRILSTYIYSGNKNVINDIGRFCAQMKSATL 269
            MN+IS++L  N++KS CSFIPFITAGYP+IDLTL  L  LDK+GAD IELG+PYSDALADGPLIQEASKV+I+NG N+  +  IL ++   INTPIIIFTYYNPILV+GIK+FI +I+  G KGL+IPDLPLEES Y+  +C++  IELILFISPTSS ERI DI++KS GC+YLVSSTGVTG+RD+IDK+I+ IS++++++S KM++LGFGI+ PD IK I++S  +ING VVGSAFT+ILS Y+      +++ I  FC +MKSATL
Sbjct:    1 MNYISNVLYQNFKKSACSFIPFITAGYPSIDLTLQTLYILDKEGADLIELGIPYSDALADGPLIQEASKVAIKNGVNIDKIIEILDEIYLKINTPIIIFTYYNPILVKGIKNFIAQISQFGVKGLVIPDLPLEESDYLISICQLYQIELILFISPTSSSERISDILDKSPGCIYLVSSTGVTGMRDSIDKNIDYISSELILNSSKMLMLGFGISNPDQIKHIIQSKPNINGIVVGSAFTKILSNYLIDSKMLLMDSIRSFCRKMKSATL 269          
BLAST of Gvermi13677.t1 vs. uniprot
Match: A0A1Z1MEM8_9FLOR (Tryptophan synthase alpha chain n=1 Tax=Vertebrata isogona TaxID=2006944 RepID=A0A1Z1MEM8_9FLOR)

HSP 1 Score: 342 bits (877), Expect = 7.840e-116
Identity = 172/270 (63.70%), Postives = 215/270 (79.63%), Query Frame = 0
Query:    1 MNHISSILKNNYQKSVCSFIPFITAGYPNIDLTLDALVELDKQGADAIELGVPYSDALADGPLIQEASKVSIQNGTNLSSVFTILKKVNGVINTPIIIFTYYNPILVRGIKSFITEIAILGAKGLIIPDLPLEESVYVNYLCKMSNIELILFISPTSSDERILDIVNKSSGCLYLVSSTGVTGIRDTIDKSINRISNDILIDSGKMVILGFGIAYPDHIKQIMKSNISINGFVVGSAFTRILSTYIYSGNKNVINDIGRFCAQMKSATLK 270
            MN+IS +L  N +KS CSFIPFIT GYP+IDLTL+ +  LD++GAD IELG+PYSDALADGPLIQEASKV+I+NG N+  +  +L +V   I TPIIIFTYYNPILVRGIK+FI +I+ LG KGLIIPDLPLEE+ Y+  +CK+  IELILFISPTSS  RI DIVNKS GCLYLVSSTGVTGIRD++DK+IN +S+ I+I + KMV+LGFGI+ PD +K +++S ++ING VVGSAFT+I S Y+     ++   +  FC  MK+ATLK
Sbjct:    1 MNYISDVLYQNSKKSACSFIPFITVGYPSIDLTLEVIDILDQEGADLIELGIPYSDALADGPLIQEASKVAIKNGVNIDKIIEVLHQVQLKITTPIIIFTYYNPILVRGIKNFIAKISQLGVKGLIIPDLPLEEADYIINICKIYQIELILFISPTSSINRISDIVNKSPGCLYLVSSTGVTGIRDSMDKNINYLSSKIMIKASKMVMLGFGISNPDQVKSVIQSTLNINGVVVGSAFTKIFSNYLSDPTLDLTGSVRTFCRIMKAATLK 270          
BLAST of Gvermi13677.t1 vs. uniprot
Match: A0A0B5W5X4_9FLOR (Tryptophan synthase alpha chain n=1 Tax=Vertebrata lanosa TaxID=1261582 RepID=A0A0B5W5X4_9FLOR)

HSP 1 Score: 340 bits (872), Expect = 4.510e-115
Identity = 172/270 (63.70%), Postives = 214/270 (79.26%), Query Frame = 0
Query:    1 MNHISSILKNNYQKSVCSFIPFITAGYPNIDLTLDALVELDKQGADAIELGVPYSDALADGPLIQEASKVSIQNGTNLSSVFTILKKVNGVINTPIIIFTYYNPILVRGIKSFITEIAILGAKGLIIPDLPLEESVYVNYLCKMSNIELILFISPTSSDERILDIVNKSSGCLYLVSSTGVTGIRDTIDKSINRISNDILIDSGKMVILGFGIAYPDHIKQIMKSNISINGFVVGSAFTRILSTYIYSGNKNVINDIGRFCAQMKSATLK 270
            MN+IS++L  N +KS CS IPFITAGYPNIDLTL A+  LD++GAD IELG+PYSDALADGPLIQEASKV+I+NG N+  V  IL K+   INTP+IIFTYYNPILV+GIK FI  I+ LG +GLIIPDLPLEES Y++ +C++  IELILFISPTSS +RI  IV+KS GCLYLVSSTGVTGIRD+ID +IN  S  I++ S KM++LGFG++ PD +K+IM+S + ING VVGSAFT+I S Y+     +++  I  FC +MK ATL+
Sbjct:    1 MNYISNVLSQNSKKSACSLIPFITAGYPNIDLTLQAIYILDQEGADLIELGIPYSDALADGPLIQEASKVAIKNGVNIDKVIEILDKIYLKINTPVIIFTYYNPILVKGIKRFIAIISKLGVRGLIIPDLPLEESDYMSTVCQIYRIELILFISPTSSSDRISSIVDKSPGCLYLVSSTGVTGIRDSIDMNINYASKQIMMKSSKMIMLGFGVSNPDQVKKIMQSQVGINGIVVGSAFTKIFSGYMSDPTIDLMGSIKTFCRRMKFATLE 270          
BLAST of Gvermi13677.t1 vs. uniprot
Match: A0A1Z1MBC0_9FLOR (Tryptophan synthase alpha chain n=1 Tax=Vertebrata thuyoides TaxID=2006970 RepID=A0A1Z1MBC0_9FLOR)

HSP 1 Score: 335 bits (860), Expect = 2.910e-113
Identity = 163/268 (60.82%), Postives = 219/268 (81.72%), Query Frame = 0
Query:    1 MNHISSILKNNYQKSVCSFIPFITAGYPNIDLTLDALVELDKQGADAIELGVPYSDALADGPLIQEASKVSIQNGTNLSSVFTILKKVNGVINTPIIIFTYYNPILVRGIKSFITEIAILGAKGLIIPDLPLEESVYVNYLCKMSNIELILFISPTSSDERILDIVNKSSGCLYLVSSTGVTGIRDTIDKSINRISNDILIDSGKMVILGFGIAYPDHIKQIMKSNISINGFVVGSAFTRILSTYIYSGNKNVINDIGRFCAQMKSAT 268
            MN+IS+IL  N +KSVCSFIPF+TAGYP++DLT+ +L  LD++GAD+IELG+PYSDALADGPLIQEASKV+I NG N+ ++  IL ++   I+TPIIIFTYYNPILV+G+ +FI  I+ LG KGL+IPDLP EE+ Y+ Y+C +  IELILFISPTSS  RI++I++KS GCLYLVSSTGVTGIRD++D++IN +SN I+ +S KMV++GFGI+ P+ +K I++S +++NG VVGSAFT+I ++Y      N+I+ +  FC +MKSAT
Sbjct:    1 MNYISNILYQNSKKSVCSFIPFLTAGYPSVDLTVKSLYVLDQEGADSIELGIPYSDALADGPLIQEASKVAINNGVNVDTIIKILDQIYLKIHTPIIIFTYYNPILVKGVNNFIATISKLGVKGLVIPDLPFEEADYIIYVCHIYKIELILFISPTSSRNRIINIIDKSPGCLYLVSSTGVTGIRDSMDENINYVSNQIVQNSDKMVMIGFGISNPEQVKNIIQSPLNVNGIVVGSAFTKIFTSYCNDTTINLIDSVRSFCREMKSAT 268          
The following BLAST results are available for this feature:
BLAST of Gvermi13677.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1Z1MHI5_MELHR9.610e-18498.52Tryptophan synthase alpha chain n=1 Tax=Melanotham... [more]
A0A1Z1MA97_9FLOR5.020e-13170.85Tryptophan synthase alpha chain n=1 Tax=Leptosipho... [more]
A0A1Z1MSK4_9FLOR6.210e-12769.26Tryptophan synthase alpha chain n=1 Tax=Kapraunia ... [more]
A0A8E6L6Z3_9FLOR2.880e-12368.28Tryptophan synthase alpha subunit n=1 Tax=Erythroc... [more]
A0A1Z1MBZ4_9FLOR1.640e-11966.54Tryptophan synthase alpha chain n=1 Tax=Polysiphon... [more]
A0A1Z1ME14_9FLOR3.550e-11967.16Tryptophan synthase alpha chain n=1 Tax=Polysiphon... [more]
A0A1Z1MI39_9FLOR4.110e-11864.31Tryptophan synthase alpha chain n=1 Tax=Vertebrata... [more]
A0A1Z1MEM8_9FLOR7.840e-11663.70Tryptophan synthase alpha chain n=1 Tax=Vertebrata... [more]
A0A0B5W5X4_9FLOR4.510e-11563.70Tryptophan synthase alpha chain n=1 Tax=Vertebrata... [more]
A0A1Z1MBC0_9FLOR2.910e-11360.82Tryptophan synthase alpha chain n=1 Tax=Vertebrata... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002028Tryptophan synthase, alpha chainTIGRFAMTIGR00262TIGR00262coord: 12..265
e-value: 2.4E-69
score: 231.0
IPR002028Tryptophan synthase, alpha chainPFAMPF00290Trp_syntAcoord: 11..268
e-value: 2.9E-68
score: 229.6
IPR002028Tryptophan synthase, alpha chainPANTHERPTHR43406TRYPTOPHAN SYNTHASE, ALPHA CHAINcoord: 2..268
IPR002028Tryptophan synthase, alpha chainHAMAPMF_00131Trp_synth_alphacoord: 14..267
score: 30.080826
IPR002028Tryptophan synthase, alpha chainCDDcd04724Tryptophan_synthase_alphacoord: 19..265
e-value: 1.78876E-88
score: 260.872
IPR013785Aldolase-type TIM barrelGENE3D3.20.20.70Aldolase class Icoord: 1..270
e-value: 2.8E-78
score: 264.4
NoneNo IPR availablePANTHERPTHR43406:SF1TRYPTOPHAN SYNTHASE ALPHA CHAIN, CHLOROPLASTICcoord: 2..268
IPR018204Tryptophan synthase, alpha chain, active sitePROSITEPS00167TRP_SYNTHASE_ALPHAcoord: 48..61
IPR011060Ribulose-phosphate binding barrelSUPERFAMILY51366Ribulose-phoshate binding barrelcoord: 1..254

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_59contigScGOVlb_59:97780..98592 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi13677.t1Gvermi13677.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_59 97780..98592 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi13677.t1 ID=Gvermi13677.t1|Name=Gvermi13677.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=271bp
MNHISSILKNNYQKSVCSFIPFITAGYPNIDLTLDALVELDKQGADAIEL
GVPYSDALADGPLIQEASKVSIQNGTNLSSVFTILKKVNGVINTPIIIFT
YYNPILVRGIKSFITEIAILGAKGLIIPDLPLEESVYVNYLCKMSNIELI
LFISPTSSDERILDIVNKSSGCLYLVSSTGVTGIRDTIDKSINRISNDIL
IDSGKMVILGFGIAYPDHIKQIMKSNISINGFVVGSAFTRILSTYIYSGN
KNVINDIGRFCAQMKSATLK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002028Trp_synthase_suA
IPR013785Aldolase_TIM
IPR018204Trp_synthase_alpha_AS
IPR011060RibuloseP-bd_barrel