Gvermi12916.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12916.t1
Unique NameGvermi12916.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length159
Homology
BLAST of Gvermi12916.t1 vs. uniprot
Match: A0A2R4G0U1_GRALE (Heat shock protein n=2 Tax=Gracilariopsis TaxID=2781 RepID=A0A2R4G0U1_GRALE)

HSP 1 Score: 126 bits (316), Expect = 5.440e-34
Identity = 70/157 (44.59%), Postives = 100/157 (63.69%), Query Frame = 0
Query:    2 EPLFPFSFPNRELRRLRQLADQMENSFKASDGTHHHVPNYEYHREQDKIHLEVELPGVQKEHVEVEMRGSNLCILGRRFKSS-GLVVEEHKDDSAQNN-DQDVQMDQGKNASVVYELQVKVGENVDEGKIKAEHKDGILKMMIPLKTESGARKIAIT 156
            +P FP S  +R++    +LAD++       D T++ VPNYEY+R++D  HL+VELPGV KEH+EVEM   NL I  RRF+SS    V +  D S +N  + D    +    S VY++QVK+G NVDE  IKAE+  G+L+++IP +  +  RKI+IT
Sbjct:    9 DPFFPLSSFDRDMHSFLRLADRLGTVHSNRDRTNYQVPNYEYNRDKDNFHLQVELPGVAKEHIEVEMNSGNLTITARRFRSSPAQPVSQEPDQSTENTGENDANKTRSLKPSHVYKMQVKIGNNVDEEGIKAEYNHGVLELIIPQRKMT-TRKISIT 164          
BLAST of Gvermi12916.t1 vs. uniprot
Match: A0A2V3IM19_9FLOR (Small heat shock protein C4 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IM19_9FLOR)

HSP 1 Score: 121 bits (303), Expect = 4.860e-32
Identity = 74/160 (46.25%), Postives = 100/160 (62.50%), Query Frame = 0
Query:    2 EPLFPFSFPNRELRRLRQLADQMENSFKASDGTHHHVPNYEYHREQDKIHLEVELPGVQKEHVEVEMRGSNLCILGRRFK----SSGLVVEEHKDDSAQNNDQDVQMDQGKNASVVYELQVKVGENVDEGKIKAEHKDGILKMMIPLKTESGARKIAITQ 157
            +PLFP S  +R++  L +LA+++ N    +DGT + VPNYEY R+ D  HL+VELPGV KEH++V++   NL I+ RRF+     SG    E        ND DV   Q    S VY++QV+VG  VDE  IKA++  G+L M+IPLK  S AR IAIT+
Sbjct:    9 DPLFPLSSFDRDMDSLLRLANRI-NVRPNADGTTYQVPNYEYQRDNDNFHLQVELPGVAKEHIDVKINTGNLTIIARRFRPSQAESGSQKPEQSTQVTAENDADVT--QSPKPSHVYKMQVEVGSTVDEDAIKADYNHGVLSMVIPLKKIS-ARTIAITE 164          
BLAST of Gvermi12916.t1 vs. uniprot
Match: A0A2V3J651_9FLOR (Heat shock protein-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J651_9FLOR)

HSP 1 Score: 111 bits (278), Expect = 2.050e-28
Identity = 64/154 (41.56%), Postives = 95/154 (61.69%), Query Frame = 0
Query:   11 NRELRRLRQLADQMENSFKASDGTHHHVPNYEYHREQDKIHLEVELPGVQKEHVEVEMRGSNLCILGRRFKSSGLVVEEHKDDSAQNNDQDVQMDQGKNA--------SVVYELQVKVGENVDEGKIKAEHKDGILKMMIPLKTESGARKIAIT 156
            +RE+R  R+ AD+ EN    ++ T +  PNYE+ R+ D I+L+VELPGV KEH+++EM    L I  RRFK+S      H    ++ ++Q  +   G++A        S VY+L VK G NVD+  IKAE+  GIL +++P+K  + ARKIA+T
Sbjct:    4 DREMRSQRRFADRSENVCLKTNRTIYKAPNYEFQRDNDNINLQVELPGVAKEHIDLEMNSGKLTITARRFKAS------HSQPPSKESEQATEEKGGRDAHEAELPQPSCVYKLHVKTGTNVDDEGIKAEYNHGILNIVLPMKKVNTARKIALT 151          
BLAST of Gvermi12916.t1 vs. uniprot
Match: A0A2V3J372_9FLOR (Small heat shock protein C4 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J372_9FLOR)

HSP 1 Score: 107 bits (266), Expect = 1.920e-26
Identity = 64/157 (40.76%), Postives = 88/157 (56.05%), Query Frame = 0
Query:    2 EPLFPFSFPNRELRRLRQLADQMENSFKASDGTHHHVPNYEYHREQDKIHLEVELPGVQKEHVEVEMRGSNLCILGRRFKSSGLVV--EEHKDDSAQNNDQDVQMDQGKNASVVYELQVKVGENVDEGKIKAEHKDGILKMMIPLKTESGARKIAIT 156
            +P FP    + ++R L +LAD++ N++  +D T   VPNYEY R  DKI L+VELPGV KEH++VEM    L I  RR + S      +E                       +Y+LQV++  NVD+  IKAE+  GIL M++PLK    AR+IAIT
Sbjct:    9 DPFFPLPSFDSDMRPLLRLADRVVNAYPITDRTTIQVPNYEYQRNNDKITLQVELPGVAKEHIDVEMNSGKLTITARRLRLSHAQPSSKESXXXXXXXXXXXXXXXXXXXXXXLYKLQVRISTNVDDEGIKAEYNHGILNMILPLKKIDSARRIAIT 165          
BLAST of Gvermi12916.t1 vs. uniprot
Match: R7QS04_CHOCR (Heat Shock Protein 20, HSP20 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QS04_CHOCR)

HSP 1 Score: 82.8 bits (203), Expect = 5.230e-17
Identity = 53/159 (33.33%), Postives = 89/159 (55.97%), Query Frame = 0
Query:    4 LFPFSFP-NRELRRLRQLADQMENSFKASDGTHHHVPNYEYHREQDKIHLEVELPGVQKEHVEVEMRGSNLCILGRRFKSSGLVVEEH-----KDDSAQNNDQDVQMDQGKNASVVYELQVKVGENVDEGKIKAEHK-DGILKMMIPLKTESGARKIAI 155
            LFP+  P + +LR +R++ D  E+  ++   TH   P+Y Y  + +  H E+E+PGV K+++ VE+  + L + G+RF+   +  ++      KD +AQN D      +    S+VY L+ ++ +  +   IKA+H  DGIL M IP+  + G RKI I
Sbjct:   12 LFPWGNPFSNDLRTMRRMLDMTESGARS---THTVEPSYRYEADGEAAHFEIEIPGVSKDNLSVEVHDNKLTVRGKRFRRPLIEKKDDDPAAAKDPAAQNGDP-AHPGEDPVPSIVYLLEARLPQGANVDAIKADHVGDGILNMTIPMVADKGTRKIQI 166          
BLAST of Gvermi12916.t1 vs. uniprot
Match: R7Q6X4_CHOCR (Heat Shock Protein 20, HSP20 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q6X4_CHOCR)

HSP 1 Score: 81.6 bits (200), Expect = 1.390e-16
Identity = 57/161 (35.40%), Postives = 89/161 (55.28%), Query Frame = 0
Query:    5 FPF--SFPNRELRRLRQLADQMENSFKASDGTHHHVPNYEYHREQDKIHLEVELPGVQKEHVEVEMRGSNLCILGRRF-------KSSGLVVEEHKDDSAQNNDQDVQMDQGKNASVVYELQVKVGENVDEGKIKAEH-KDGILKMMIPLKTESGARKIAI 155
            FP+  SF N +LR +R++ D  E+  ++   TH   P+Y Y  +    H E+E+PGV K+++ VE+  + L + G+RF       K +  V +    D AQN D D Q D+    S+VY L+ ++ +  +   IKA+H  DGIL M IP+  + G RK+ I
Sbjct:   13 FPWGNSFGN-DLRTMRRMLDMTESGPRS---THTVEPSYRYEADSAAAHFEIEIPGVSKDNLSVEVHENKLTVRGKRFCRPLIEKKDNSAVAK----DPAQNGDPD-QADKDPAPSIVYHLEARLPQRANVDAIKADHIGDGILNMTIPMVDDKGPRKVQI 164          
BLAST of Gvermi12916.t1 vs. uniprot
Match: A0A2V3IUF0_9FLOR (SHSP domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUF0_9FLOR)

HSP 1 Score: 61.2 bits (147), Expect = 8.830e-9
Identity = 41/129 (31.78%), Postives = 68/129 (52.71%), Query Frame = 0
Query:   39 PNYEYHREQDKIHLEVELPGVQKEHVEVEMRGSNLCILGRRFKSSGLVV---EEHKDDSAQNNDQDVQMDQGKNA--------SVVYELQVKVGENVDEGKIKAE-HKDGILKMMIPLKTESGARKIAI 155
            P+Y Y   QD   L+VELPGV KEH+ +E++G +L +  RRF++S L          D+A+  D D       +         +  Y L++++  + D   +K E + +GIL + IP+ + + +RKI I
Sbjct:   37 PSYFYESNQDSAFLQVELPGVAKEHISIEIQGHHLTLSARRFRTSKLAPLSSSTEGGDAAEAQDADHTATPAASEPGPADPTPAFTYVLELRLANDTDLEAVKVESYVNGILTIRIPVVSSTSSRKITI 165          
BLAST of Gvermi12916.t1 vs. uniprot
Match: UPI00114D330D (Hsp20/alpha crystallin family protein n=1 Tax=Oligoflexus tunisiensis TaxID=708132 RepID=UPI00114D330D)

HSP 1 Score: 58.9 bits (141), Expect = 8.940e-8
Identity = 37/144 (25.69%), Postives = 72/144 (50.00%), Query Frame = 0
Query:   17 LRQLADQMENSF--KASDGTHHHVPNYEYHREQDKIHLEVELPGVQKEHVEVEMRGSNLCILGRRFKSSGLVVEEHKDDSAQNNDQDVQMDQGKNASVVYELQVKVGENVDEGKIKAEHKDGILKMMIPLKTESGARKIAITQG 158
            LRQL D    +   +  D     +P  +     D   L  ++PG++K+++++EM+G+ L + G R         + + +  +   + V+   G+     ++  +++ ENV    I+AE+ +G+LK+ +P   ESG +KI I  G
Sbjct:   25 LRQLDDIFNEAMDTRTDDSGRMMIPQCDMEESDDHYLLSFDMPGLEKDNIDIEMQGNQLVVTGER---------KQEQEKGEGRSRIVERRYGR-----FQRAIRLPENVKTDGIEAEYTNGVLKVAVPKSAESGRQKIKIGSG 154          
BLAST of Gvermi12916.t1 vs. uniprot
Match: A0A7M3SW75_9MICC (Hsp20 family protein n=1 Tax=Rothia koreensis TaxID=592378 RepID=A0A7M3SW75_9MICC)

HSP 1 Score: 57.8 bits (138), Expect = 1.170e-7
Identity = 41/151 (27.15%), Postives = 77/151 (50.99%), Query Frame = 0
Query:   10 PNRELRRLRQLADQMENSFKASDGT--HHHVPNYEYHREQDKIHLEVELPGVQKEHVEVEMRGSNLCILGRRFKSSGLVVEEHKDDSAQNNDQDVQMDQGKNASVVYELQVKVGENVDEGKIKAEHKDGILKMMIPLKTESGARKIAITQG 158
            P R+L RL Q        F  S GT  H  +   +  R++D+ H+E++LPGV  E ++V++  + L +  RR         +  DDS +       +   +    V+  Q+ +G+ +D  +I+A +++G+L + IP+  ++  RK+A+  G
Sbjct:    7 PFRDLERLSQ-------QFFGSQGTLAHPTMMPMDAWRDEDQFHIELDLPGVSAESIDVDVEQNILTVEARR---------DGPDDSRE-------LTTAERPRGVFRRQLSLGQGLDTSRIQATYQNGVLSLTIPVAEQAKPRKVAVHPG 134          
BLAST of Gvermi12916.t1 vs. uniprot
Match: UPI0015C0B8E5 (Hsp20/alpha crystallin family protein n=1 Tax=Thiomicrorhabdus sp. HH3 TaxID=2748011 RepID=UPI0015C0B8E5)

HSP 1 Score: 57.0 bits (136), Expect = 2.210e-7
Identity = 42/140 (30.00%), Postives = 72/140 (51.43%), Query Frame = 0
Query:   15 RRLRQLADQMENSFKASDGTHHHV--PNYEYHREQDKIHLEVELPGVQKEHVEVEMRGSNLCILGRRFKSSGLVVEEHKDDSAQNNDQDVQMDQGKNASVVYELQVKVGENVDEGKIKAEHKDGILKMMIPLKTESGARK 152
            + LR+L  + EN+  A+  ++ +   P+          H+EV+LPGV+KE ++VE++ + L I G R        E  KDD  +     ++   GK     +E    + +NVD   + A  KDG+L++++P K  +GA K
Sbjct:   12 KELRELERRWENAVPATTESNLNAFAPSVNTREGDYAYHIEVDLPGVKKEDIKVEVKDNRLTICGERKTKD----EVKKDDYYR-----MESSYGK-----FERSFTLPDNVDGENVSASSKDGVLEVVLPKKERNGASK 137          
The following BLAST results are available for this feature:
BLAST of Gvermi12916.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 23
Match NameE-valueIdentityDescription
A0A2R4G0U1_GRALE5.440e-3444.59Heat shock protein n=2 Tax=Gracilariopsis TaxID=27... [more]
A0A2V3IM19_9FLOR4.860e-3246.25Small heat shock protein C4 n=1 Tax=Gracilariopsis... [more]
A0A2V3J651_9FLOR2.050e-2841.56Heat shock protein-like n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J372_9FLOR1.920e-2640.76Small heat shock protein C4 n=1 Tax=Gracilariopsis... [more]
R7QS04_CHOCR5.230e-1733.33Heat Shock Protein 20, HSP20 n=1 Tax=Chondrus cris... [more]
R7Q6X4_CHOCR1.390e-1635.40Heat Shock Protein 20, HSP20 n=1 Tax=Chondrus cris... [more]
A0A2V3IUF0_9FLOR8.830e-931.78SHSP domain-containing protein n=1 Tax=Gracilariop... [more]
UPI00114D330D8.940e-825.69Hsp20/alpha crystallin family protein n=1 Tax=Olig... [more]
A0A7M3SW75_9MICC1.170e-727.15Hsp20 family protein n=1 Tax=Rothia koreensis TaxI... [more]
UPI0015C0B8E52.210e-730.00Hsp20/alpha crystallin family protein n=1 Tax=Thio... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008978HSP20-like chaperoneGENE3D2.60.40.790coord: 6..156
e-value: 5.9E-18
score: 66.9
IPR008978HSP20-like chaperoneSUPERFAMILY49764HSP20-like chaperonescoord: 27..155
IPR002068Alpha crystallin/Hsp20 domainPFAMPF00011HSP20coord: 44..155
e-value: 2.8E-10
score: 40.2
IPR002068Alpha crystallin/Hsp20 domainPROSITEPS01031SHSPcoord: 32..158
score: 14.315673
NoneNo IPR availableCDDcd06464ACD_sHsps-likecoord: 48..143
e-value: 5.63095E-10
score: 51.4009

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_425contigScGOVlb_425:2075072..2075548 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12916.t1Gvermi12916.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_425 2075072..2075548 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12916.t1 ID=Gvermi12916.t1|Name=Gvermi12916.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=159bp
MEPLFPFSFPNRELRRLRQLADQMENSFKASDGTHHHVPNYEYHREQDKI
HLEVELPGVQKEHVEVEMRGSNLCILGRRFKSSGLVVEEHKDDSAQNNDQ
DVQMDQGKNASVVYELQVKVGENVDEGKIKAEHKDGILKMMIPLKTESGA
RKIAITQG*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008978HSP20-like_chaperone
IPR002068A-crystallin/Hsp20_dom