Gvermi12795.t2 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male
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Overview
Homology
BLAST of Gvermi12795.t2 vs. uniprot
Match: A0A2V3IES9_9FLOR (Pentatricopeptide repeat-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IES9_9FLOR) HSP 1 Score: 206 bits (524), Expect = 7.610e-53 Identity = 134/235 (57.02%), Postives = 145/235 (61.70%), Query Frame = 0
Query: 16 ALVRSHAAAQPAAQPPSRAAFPTAARALDRAVAAAWGAPVTLQPVQSIWANTGVWTADDPKRRRRDA-RTVPPADSVLCPTVEHSTAPPPCRSPPSAPVSAAPAAXXALXXXXXXXXXXXXXXXLQRPPAPGAAPVSAXXXXXXXXXXXXXXXXHAPNSDSQVVRQLENCLRRRKIDRARDILFENAQRRVFRTRHYNSLLDALVKANRLHDAEMLFAEFDRNGLVRDVASYSIM 249
ALVR+ AAAQ RA + TAARALDRAVAAAWGAPV+L PVQSIWANTGVWTADDPKRRRRD R VPPA++VLCPTVE PPSA SA P + P +AP A +SD +VR LEN LRRRK+DRARDILFEN VF TRHYNSLLDA VKANRL DAE+LFAEF RN L DVASYSIM
Sbjct: 68 ALVRNTAAAQXXXXXXPRAPYATAARALDRAVAAAWGAPVSLHPVQSIWANTGVWTADDPKRRRRDPHRPVPPAEAVLCPTVE----------PPSAAHSAPPLSTLI----------------------PPSAPTPLRTHVNSAQHTPP-----AKSSDPDLVRLLENSLRRRKLDRARDILFENFGTAVFHTRHYNSLLDAFVKANRLPDAELLFAEFGRNSLTPDVASYSIM 265
BLAST of Gvermi12795.t2 vs. uniprot
Match: R7QMM7_CHOCR (PPR_long domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QMM7_CHOCR) HSP 1 Score: 98.2 bits (243), Expect = 2.100e-17 Identity = 50/80 (62.50%), Postives = 61/80 (76.25%), Query Frame = 0
Query: 171 PNSDSQVVRQLENCLRRRKIDRARDILFENAQRRVFRTRHYNSLLDALVKANRLHDAEMLFAEFDRNGLVRDVASYSIMI 250
P VVRQLENC+RRRK+D+ARDIL +A RVF TRHYN+LL AL K+NR+ +AE LF +F +GL DVAS+SIMI
Sbjct: 198 PQDQVDVVRQLENCIRRRKLDKARDILLGHATTRVFGTRHYNALLAALAKSNRVDEAERLFCQFANSGLAHDVASHSIMI 277
BLAST of Gvermi12795.t2 vs. uniprot
Match: A0A1X6NU58_PORUM (Uncharacterized protein (Fragment) n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NU58_PORUM) HSP 1 Score: 69.3 bits (168), Expect = 1.680e-8 Identity = 38/86 (44.19%), Postives = 56/86 (65.12%), Query Frame = 0
Query: 170 APNSDSQVVRQLENCLRRRKIDRARDILFENAQRRVFRTRHYNSLLDALVKANRLHDAEMLFAEFDRN-GLVRDVASYSIMICAYG 254
A + ++R+LE CLR+RK+DRA I+ E + RH N++LDAL K+ R+ +A+ LF +FD L RDVA++SIM+ YG
Sbjct: 366 AREQQADLLRRLETCLRKRKLDRALAIVREGVTAHLLGVRHANAVLDALGKSGRVAEAQKLFEQFDHPLALRRDVATHSIMVSTYG 451
BLAST of Gvermi12795.t2 vs. uniprot
Match: A0A5J4YX80_PORPP (Pentatricopeptide repeat-containing protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YX80_PORPP) HSP 1 Score: 60.8 bits (146), Expect = 8.440e-6 Identity = 37/86 (43.02%), Postives = 51/86 (59.30%), Query Frame = 0
Query: 169 HAPNSDSQ-VVRQLENCLRRRKIDRARDILFENAQRRVFRTRHYNSLLDALVKANRLHDAEMLFAEFDRNGLVRDVASYSIMICAY 253
H P + + + +LE+ LR R++ A +L E RVF TRHYN++LDAL K ++ +AE LF+ DVASYSIMI Y
Sbjct: 246 HVPKATQRRLAARLESALRERRVADACALLHEYGSMRVFSTRHYNAVLDALCKGQKVAEAERLFSSLSSP----DVASYSIMISMY 327 The following BLAST results are available for this feature:
BLAST of Gvermi12795.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 4
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gvermi12795.t2 ID=Gvermi12795.t2|Name=Gvermi12795.t2|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=756bpback to top |