Gvermi12945.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi12945.t1
Unique NameGvermi12945.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length541
Homology
BLAST of Gvermi12945.t1 vs. uniprot
Match: A0A2V3IIA4_9FLOR (DNA-directed DNA polymerase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIA4_9FLOR)

HSP 1 Score: 826 bits (2133), Expect = 3.740e-279
Identity = 443/647 (68.47%), Postives = 484/647 (74.81%), Query Frame = 0
Query:    2 QSPADRASVDVLPPNQYVPLHVHSHYSLLDGASQLPSLVAKAAELDVPALALTDHGVLYGAVQLVRACSETEVKPIIGNEMYIVNDIPDGQPNGKGPKRYHLI------------------------------------------YREGLIVSSACLRGEIAQAILNDDIDSARTVASWFRDVFRDDVYLEIQDHGSEEDKKVKPVMVQLSKELSIKVIDTNDSHFTSCLDAEAHDALICIQTRKRLSDENRLRYSGTEYFKSVDEMRQCFVDHPPLPAVDEALYNTLCVDDI--------------------FGSSHDAYLRHVAQLGLQERLKARIKSGLIRTGSERTYIERLELELDMIRRMGFSSYFLVVWDYIHFARTNSMPVGPGRGSAAGSLVAFALRITDVDPIPFNLLFERFLNIERKSMPDIDTDVSVEGREKVIAYVTERYGQSRVAQIITFNRLTI----------------------------------------------DFKKAVESRPDYGEWLDKAQRIEEKNKKFGIHAAGVVISANPMTDIVPLTKAKHGETITQYAMEDVESVDLLKMDFLFLKNLTVIDKTLKFINQGRREQGNDEDLHFSVDALPLDDENTFRLLSEGELDGIFQ 540
            QSP + A   ++PPNQYVPLHVHS YSLLDGASQLPSLV +AAEL VPALALTDHGVLYGA+QLVRAC+ T VKPIIGNEMY+VNDIPD QPNGKGPKRYHLI                                          YREGLIVSSACL GEIAQAILNDDIDSARTVASWFRDVF DD YLEIQDHGS+EDKKV PVM+QLS+ELSIKVI TNDSHFTSCLDAEAHDALICIQT KRL+DENRLRYSGTEYFKS +EMR+CFVDH P  AVDEAL+NTL V +                     FG+SHD YLR V++LGL+ER+ AR KSGLI+ GSER Y ERL  ELDMI RMGFSSYFLVVWDYI FAR+ ++PVGPGRGS AGSLVAFALRITDVDPIPFNLLFERFLNIER+SMPDID D SV+GREKVI+YVTERYGQ+RVAQIITFNRLT                                               DFKKAV   P+Y EW+DKA+RIE  NK FGIHAAGVVISANP+TDIVPLTKAKHGETITQYAMEDVES+ LLKMDFL LKNL+VI+  LKFIN GRREQG +EDL FSVDALPLDD+ T++LL++GELDGIFQ
Sbjct:   45 QSP-NSAQSQLVPPNQYVPLHVHSDYSLLDGASQLPSLVTRAAELHVPALALTDHGVLYGAIQLVRACAGTTVKPIIGNEMYVVNDIPDEQPNGKGPKRYHLIVLAKNQIGYRNLVKLTSIAHLDGVVGKGIFARPCINKAQLYQYREGLIVSSACLGGEIAQAILNDDIDSARTVASWFRDVFGDDFYLEIQDHGSDEDKKVNPVMLQLSRELSIKVIATNDSHFTSCLDAEAHDALICIQTGKRLTDENRLRYSGTEYFKSAEEMRRCFVDHLPTTAVDEALHNTLQVAEKVESYHLFGATRIPDFPLPIGFGTSHDDYLRRVSELGLKERIAARTKSGLIKHGSERLYTERLHSELDMICRMGFSSYFLVVWDYIRFARSQNIPVGPGRGSVAGSLVAFALRITDVDPIPFNLLFERFLNIERRSMPDIDIDFSVQGREKVISYVTERYGQARVAQIITFNRLTSKALLKDVARVHNVSYKEADRLAKLIPVTRGKPASLKELLSKGTANRDFKKAVNDHPEYQEWIDKAKRIEGTNKTFGIHAAGVVISANPLTDIVPLTKAKHGETITQYAMEDVESLGLLKMDFLGLKNLSVIEMALKFINNGRREQGIEEDLDFSVDALPLDDDKTYKLLADGELDGIFQ 690          
BLAST of Gvermi12945.t1 vs. uniprot
Match: R7QIL0_CHOCR (DNA-directed DNA polymerase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QIL0_CHOCR)

HSP 1 Score: 718 bits (1854), Expect = 1.270e-238
Identity = 388/628 (61.78%), Postives = 446/628 (71.02%), Query Frame = 0
Query:    8 ASVDVLPPNQYVPLHVHSHYSLLDGASQLPSLVAKAAELDVPALALTDHGVLYGAVQLVRACSETEVKPIIGNEMYIVNDIPDGQPNG-----KGPKRYHLI------------------------YREGLIVSSACLRGEIAQAILNDDIDSARTVASWFRDVFRDDVYLEIQDHGSEEDKKVKPVMVQLSKELSIKVIDTNDSHFTSCLDAEAHDALICIQTRKRLSDENRLRYSGTEYFKSVDEMRQCFVDHPPLPAVDEALYNTLCV--------------------DDIFGSSHDAYLRHVAQLGLQERLKARIKSGLIRTGSERTYIERLELELDMIRRMGFSSYFLVVWDYIHFARTNSMPVGPGRGSAAGSLVAFALRITDVDPIPFNLLFERFLNIERKSMPDIDTDVSVEGREKVIAYVTERYGQSRVAQIITFNRLTI----------------------------------------------DFKKAVESRPDYGEWLDKAQRIEEKNKKFGIHAAGVVISANPMTDIVPLTKAKHGETITQYAMEDVESVDLLKMDFLFLKNLTVIDKTLKFINQGRREQGNDEDLHFSVDALPLDDENTFRLLSEGELDGIFQ 540
            A  D  P +QYVPLHVHS +SLLDGASQLPSLV +AAEL VPALALTDHGVLYGA+QLVR C++  VKPIIGNEMYI+ND  D +P+      K PKRYHLI                        +REGLIVSSACL GEI QAILNDDI+SA TVA+W+RDVF +D YLEIQDHGS EDKKV P MV+LS+ L IKVI TNDSHFT+CLDAEAHDALICIQT K L+DENRL Y+G EYFKSV+EMR+CF DH P  A+DEALYNT+ V                     D FG SH++YL+ V++  L+ RL AR K+GL+   +E  Y ERLE EL+MI +MGFSSYFLVVWDY+  A+   +PVGPGRGSAAGSLVAFALRITDVDPIPFNLLFERFLN ERKSMPDIDTD SV GREK+IAYV++RYG+ RVAQIITFNRLT                                               DF++ VE    Y  W+DKA+RIE  NK +GIHAAGVVISA+P+TDIVPL++AKHGE ITQYAMEDVE + LLKMDFL LKNLTVI+  L+FI  GR + G  E+L FSVD+LPLDDE T+RLL+EGELDGIFQ
Sbjct:   51 ARPDTDPASQYVPLHVHSDFSLLDGASQLPSLVQRAAELGVPALALTDHGVLYGAIQLVRTCTKAGVKPIIGNEMYIINDTFDAEPSEEFGKQKAPKRYHLIVLAKNTIGYRNLVKLTTMAHLSGKHREGLIVSSACLGGEIPQAILNDDIESAATVATWYRDVFGEDFYLEIQDHGSAEDKKVNPCMVELSRTLGIKVIATNDSHFTNCLDAEAHDALICIQTGKLLTDENRLHYAGNEYFKSVEEMRKCFTDHLPREAIDEALYNTIHVAEKVGKYDLFGETRIPDFPIPDGFGKSHNSYLKLVSRENLRSRLDAREKAGLVDPEAEPQYFERLEFELNMICQMGFSSYFLVVWDYVRHAKELGIPVGPGRGSAAGSLVAFALRITDVDPIPFNLLFERFLNPERKSMPDIDTDFSVRGREKIIAYVSDRYGKDRVAQIITFNRLTSKAVLKDVARVHSVPYSEADRLAKLIPVVRGKPATLSAMLSDKTPSRDFRQMVEQNSSYQTWIDKAKRIEGTNKTYGIHAAGVVISASPLTDIVPLSRAKHGEMITQYAMEDVEDLGLLKMDFLGLKNLTVIETALEFIRDGRAKCGIHEELDFSVDSLPLDDEKTYRLLAEGELDGIFQ 678          
BLAST of Gvermi12945.t1 vs. uniprot
Match: A0A2D2Q3N2_THELV (DNA-directed DNA polymerase n=1 Tax=Synechococcus lividus PCC 6715 TaxID=1917166 RepID=A0A2D2Q3N2_THELV)

HSP 1 Score: 543 bits (1400), Expect = 3.470e-182
Identity = 309/626 (49.36%), Postives = 385/626 (61.50%), Query Frame = 0
Query:   18 YVPLHVHSHYSLLDGASQLPSLVAKAAELDVPALALTDHGVLYGAVQLVRACSETEVKPIIGNEMYIVN-DIPDGQPN--------GKGPKRYHLI------------------------------YREGLIVSSACLRGEIAQAILNDDIDSARTVASWFRDVFRDDVYLEIQDHGSEEDKKVKPVMVQLSKELSIKVIDTNDSHFTSCLDAEAHDALICIQTRKRLSDENRLRYSGTEYFKSVDEMRQCFVDHPPLPAVDEALYNTLCVDD------IF------------GSSHDAYLRHVAQLGLQERLKARIKSGLIRTGSERTYIERLELELDMIRRMGFSSYFLVVWDYIHFARTNSMPVGPGRGSAAGSLVAFALRITDVDPIPFNLLFERFLNIERKSMPDIDTDVSVEGREKVIAYVTERYGQSRVAQIITFNRLTI----------------------------------------------DFKKAVESRPDYGEWLDKAQRIEEKNKKFGIHAAGVVISANPMTDIVPLTKAKHGETITQYAMEDVESVDLLKMDFLFLKNLTVIDKTLKFINQGRREQGNDEDLHFSVDALPLDDENTFRLLSEGELDGIFQ 540
            +V LH+HS YSLLDGASQLP LVA+A EL +PA+ALTDHGV+YGAV+L++ C    +KPIIGNEMY++N DI   + N         K  + YH +                              YREGLIV+SACL GEI QAIL    + AR+VA W++  F +D YLEIQDHGS+ED+ V   +V++ +EL I++I TNDSHF SC D EAHDAL+CIQT K L+DE RLRYSGTEY KS  EM + F DH P   +  AL NTL V D      IF            G + D YL  VA  GL  R + + +  L     + TY +RLE EL M+++MGFS+YFLVVWDYI +AR N +PVGPGRGSAAGSLVA+ALRIT++DP+   LLFERFLN ERKSMPDIDTD  +E RE+VI YVT++YG  RVAQIITFNR+T                                               +FK+  +S PD   W+D A RIE  NK +G+HAAGVVI++ P+  IVPL +   G  ITQY MED+ES+ LLKMDFL L+NLT+I KT   + Q R +          VDALPLDD  T+++L+EG+L+GIFQ
Sbjct:    3 FVGLHIHSDYSLLDGASQLPDLVARAIELGMPAIALTDHGVMYGAVELLKLCRGKPLKPIIGNEMYVINGDITKQERNPRYHQVVLAKNKQGYHNLCKLTSISHLQGFQGKGIFARPCINKELLAQYREGLIVTSACLGGEIPQAILQGKPEVARSVARWYQATFGNDFYLEIQDHGSQEDRIVNVELVRIGQELGIEIIATNDSHFISCYDVEAHDALLCIQTGKLLTDEKRLRYSGTEYLKSSAEMARLFRDHLPEDVIQTALANTLKVADKVESYNIFREPQSPDFPVPSGHTADTYLEQVAWQGLMARFQVQQRDAL-----DPTYRQRLEYELKMLQQMGFSTYFLVVWDYIKYARDNGIPVGPGRGSAAGSLVAYALRITNIDPVHHGLLFERFLNPERKSMPDIDTDFCIERREEVIQYVTQKYGSDRVAQIITFNRMTSKAVLKDVARVLDIPYGQADQMAKLIPIVRGKPTKLAVMISDDTPSPEFKEKYDSDPDVRRWVDMAMRIEGTNKTYGVHAAGVVIASEPLDQIVPLQRNNDGAVITQYFMEDLESLGLLKMDFLGLRNLTMIQKTCDLVQQNRGQS-------LDVDALPLDDPKTYQILAEGKLEGIFQ 616          
BLAST of Gvermi12945.t1 vs. uniprot
Match: UPI0002AC3BC6 (DNA polymerase III subunit alpha n=1 Tax=Leptolyngbya sp. PCC 6406 TaxID=1173264 RepID=UPI0002AC3BC6)

HSP 1 Score: 543 bits (1399), Expect = 1.020e-181
Identity = 306/635 (48.19%), Postives = 390/635 (61.42%), Query Frame = 0
Query:   18 YVPLHVHSHYSLLDGASQLPSLVAKAAELDVPALALTDHGVLYGAVQLVRACSETEVKPIIGNEMYIVNDIPDGQPNGKGPK----RYHLI------------------------------------------YREGLIVSSACLRGEIAQAILNDDIDSARTVASWFRDVFRDDVYLEIQDHGSEEDKKVKPVMVQLSKELSIKVIDTNDSHFTSCLDAEAHDALICIQTRKRLSDENRLRYSGTEYFKSVDEMRQCFVDHPPLPAVDEALYNTLCVDD-------IFGSSH-------------DAYLRHVAQLGLQERLKARIKSGLIRTGSERTYIERLELELDMIRRMGFSSYFLVVWDYIHFARTNSMPVGPGRGSAAGSLVAFALRITDVDPIPFNLLFERFLNIERKSMPDIDTDVSVEGREKVIAYVTERYGQSRVAQIITFNRLTI----------------------------------------------DFKKAVESRPDYGEWLDKAQRIEEKNKKFGIHAAGVVISANPMTDIVPLTKAKHGETITQYAMEDVESVDLLKMDFLFLKNLTVIDKTLKFINQGRREQGNDEDLHFSVDALPLDDENTFRLLSEGELDGIFQ 540
            +V LH+HS YSLLDGASQLP LVA+A EL++PA+ALTDHGV+YGA++L++ C    +KPIIGNEMY+VN   + Q N  G K    RYH +                                          Y EGLIV+SACL GE+ QAIL    + AR VA W++D+F DD YLEIQDHGS ED+ V   +V++++EL I+++ TNDSHF SC D EAHDAL+CIQT K L+++ RLRYSGTEY KS DEMRQ F DH P   ++E++  T+ V D       I G                +AY+ HVA+ GL +R+KA     +     E  Y +RLE E++M+ +MGF +YFLVVWDYI FAR N++PVGPGRGSAAGSLVA+A+ IT++DP+   LLFERFLN ERKSMPDIDTD  ++ R++VI YVTE+YG+ RVAQIITFNR+T                                               +F++  ES P    WLD A RIE  NK FG+HAAGVVIS +P+ +IVPL +   G+ ITQY MEDVE++ LLKMDFL LKNLT+I K ++ +  G   QG   DL    D LP+DD  TF+LL +G+L GIFQ
Sbjct:    3 FVGLHIHSDYSLLDGASQLPQLVARAKELEMPAIALTDHGVMYGAIELIKVCKGAGIKPIIGNEMYVVNGDIEQQLNSYGKKVKLPRYHQVVLAKNTQGYKNLVKLTTISHLQGMQGSGIFTRPCINKDLLEQYHEGLIVTSACLGGEVPQAILQKRPEIARRVAQWYKDLFGDDYYLEIQDHGSPEDRIVNVEIVKIARELDIQILCTNDSHFISCNDVEAHDALLCIQTGKLLTEDKRLRYSGTEYLKSADEMRQLFRDHLPDEVIEESIATTMAVADKVEEYTGILGQPRIPDFPIPEGFEGAEAYMAHVAREGLVQRVKAANYEAI-----EEKYRDRLEYEIEMMIQMGFPTYFLVVWDYIRFARENNIPVGPGRGSAAGSLVAYAMGITNIDPVHHGLLFERFLNPERKSMPDIDTDFCIQRRDEVIDYVTEKYGKERVAQIITFNRMTSKAVLKDVARVLNIPYAESDRMAKLIPVSRGKPTKLKVMVGSDSPAPEFREKYESDPQTRRWLDMAMRIEGMNKTFGVHAAGVVISKDPLDEIVPLQRNNDGQVITQYYMEDVEALGLLKMDFLGLKNLTMIQKAVELVQVG---QGKTIDL----DNLPMDDPATFKLLEKGDLGGIFQ 625          
BLAST of Gvermi12945.t1 vs. uniprot
Match: Q8DHA3_THEVB (DNA-directed DNA polymerase n=6 Tax=Cyanobacteria TaxID=1117 RepID=Q8DHA3_THEVB)

HSP 1 Score: 541 bits (1394), Expect = 2.770e-181
Identity = 311/628 (49.52%), Postives = 390/628 (62.10%), Query Frame = 0
Query:   18 YVPLHVHSHYSLLDGASQLPSLVAKAAELDVPALALTDHGVLYGAVQLVRACSETEVKPIIGNEMYIVN-DIP--DGQPN------GKGPKRYHLI------------------------------YREGLIVSSACLRGEIAQAILNDDIDSARTVASWFRDVFRDDVYLEIQDHGSEEDKKVKPVMVQLSKELSIKVIDTNDSHFTSCLDAEAHDALICIQTRKRLSDENRLRYSGTEYFKSVDEMRQCFVDHPPLPAVDEALYNTLCVDD------IF------------GSSHDAYLRHVAQLGLQERLKARIKSGLIRTGSERTYIERLELELDMIRRMGFSSYFLVVWDYIHFARTNSMPVGPGRGSAAGSLVAFALRITDVDPIPFNLLFERFLNIERKSMPDIDTDVSVEGREKVIAYVTERYGQSRVAQIITFNRLTI----------------------------------------------DFKKAVESRPDYGEWLDKAQRIEEKNKKFGIHAAGVVISANPMTDIVPLTKAKHGETITQYAMEDVESVDLLKMDFLFLKNLTVIDKTLKFI--NQGRREQGNDEDLHFSVDALPLDDENTFRLLSEGELDGIFQ 540
            +V LH+HS YSLLDGASQLP LVA+A EL +PA+ALTDHGV+YGA++L++ C    +KPIIGNEMY++N DI   + +P        K  + YH +                              YREGLIV+SACL GEI QAIL    + AR+VA+W++  F +D YLEIQDHGS+ED+ V   +V++ +EL IK+I TNDSHF SC D EAHDAL+CIQT K LSDE RLRYSGTEY KS  EM + F DH P   + EAL NTL V D      IF            G + D YL  VA  GL ER +   +  L     E TY +RLE EL M+++MGFS+YFLVVWDYI +AR +++PVGPGRGSAAGSLVA+ALRIT++DP+   LLFERFLN ERKSMPDIDTD  ++ RE+VI YVT++YG  RVAQIITFNR+T                                               +FK+  +S P    W+D A RIE  NK +G+HAAGVVI++ P+  +VPL +   G  ITQY MED+ES+ LLKMDFL LKNLT++ KT + I  N G+R           +DALPLDD  T++LL+EG+L+GIFQ
Sbjct:    3 FVGLHIHSDYSLLDGASQLPDLVARAMELGMPAIALTDHGVMYGAIELLKLCRGKPLKPIIGNEMYVINGDITKQERKPRFHQVVLAKNKQGYHNLCKLTTISHLQGFQGKGIFARPCINKELLAQYREGLIVTSACLGGEIPQAILQGKPELARSVAAWYQQTFGEDFYLEIQDHGSQEDRVVNVELVRIGRELGIKIIATNDSHFISCHDVEAHDALLCIQTNKLLSDEKRLRYSGTEYLKSAAEMARLFRDHLPDEVIQEALANTLEVADKIEAYNIFREPQSPEFPVPPGHTADTYLEQVAWQGLLERFQLSDRQQL-----EATYRQRLEYELKMLQQMGFSNYFLVVWDYIKYARDHNIPVGPGRGSAAGSLVAYALRITNIDPVHHGLLFERFLNPERKSMPDIDTDFCIDRREEVIQYVTQKYGSDRVAQIITFNRMTSKAVLKDVARVLDIPYSQADQMAKLIPVVRGKPVKLAVMISEETPSPEFKEKYDSDPVVRRWIDMAMRIEGTNKTYGVHAAGVVIASEPLDQLVPLQRNNDGAVITQYFMEDLESLGLLKMDFLGLKNLTMLQKTQELIEKNHGQR---------IDLDALPLDDAKTYQLLAEGKLEGIFQ 616          
BLAST of Gvermi12945.t1 vs. uniprot
Match: UPI001EF2DFCC (DNA polymerase III subunit alpha n=1 Tax=Spirulina major TaxID=270636 RepID=UPI001EF2DFCC)

HSP 1 Score: 538 bits (1387), Expect = 3.210e-180
Identity = 303/649 (46.69%), Postives = 393/649 (60.55%), Query Frame = 0
Query:   18 YVPLHVHSHYSLLDGASQLPSLVAKAAELDVPALALTDHGVLYGAVQLVRACSETEVKPIIGNEMYIVN-DIPDGQPNGKGPKRYHLI------------------------------------------YREGLIVSSACLRGEIAQAILNDDIDSARTVASWFRDVFRDDVYLEIQDHGSEEDKKVKPVMVQLSKELSIKVIDTNDSHFTSCLDAEAHDALICIQTRKRLSDENRLRYSGTEYFKSVDEMRQCFVDHPPLPAVDEALYNTLCVDDIF------------------GSSHDAYLRHVAQLGLQERLKARIKSGLIRTGSERTYIERLELELDMIRRMGFSSYFLVVWDYIHFARTNSMPVGPGRGSAAGSLVAFALRITDVDPIPFNLLFERFLNIERKSMPDIDTDVSVEGREKVIAYVTERYGQSRVAQIITFNRLTI----------------------------------------------DFKKAVESRPDYGEWLDKAQRIEEKNKKFGIHAAGVVISANPMTDIVPLTKAKHGETITQYAMEDVESVDLLKMDFLFLKNLTVIDKTLKFINQGRREQGNDEDLHFSVDALPLDD-------------------ENTFRLLSEGELDGIFQ 540
            +V LH+HS YSLLDGASQLPSLV +A EL++PA+ALTDHGV+YGA+QL++ C    +KPIIGNEMY++N DI D +   K  KRYH +                                          YREGLIV+SACL GE+ Q IL +D++ ARTVA W++++F DD YLEIQDHGS ED+ V   +V++++EL IK+I TNDSHF SC D EAHDAL+CIQT+K ++++ RLRYSGTEY KS +EMR+ F DH     ++EA+  T+ V +                    G + D+YL  V   GL ERLK R + G + T    TY ERLELEL M+++MGFS+YFLVVWDYI FAR N +PVGPGRGSAAGSLVA++L+IT++DP+   LLFERFLN ERKSMPDIDTD  ++ REKVI YVTE+YG++ VAQIITFNR+T                                               +FK+  E+ P    W+D A RIE  NK FG+HAAGVVIS+ P+ + +PL +   G TI QY+MEDVES+ LLKMDFL LKNLT++ K    + +        +++   +D LPLD+                   + T++L   G L+GIFQ
Sbjct:    2 FVGLHIHSDYSLLDGASQLPSLVDRAVELEMPAIALTDHGVMYGAIQLLKTCRSKGIKPIIGNEMYVINGDIHDKK---KRNKRYHQVVLAKNTQGYKNLTKLTTISHLEGMQGKGIFSRPCINKDLLEQYREGLIVTSACLGGEVPQKILKNDLEDARTVAQWYKNLFGDDYYLEIQDHGSAEDRIVNLEIVKIARELDIKIIATNDSHFISCNDVEAHDALLCIQTQKLITEDKRLRYSGTEYLKSAEEMRELFRDHLTNDIIEEAIATTIEVAEKVQPYKILGEPRIPDYPIPAGFTADSYLEQVTWEGLLERLKCRSR-GEVNT----TYKERLELELKMMQKMGFSTYFLVVWDYIKFARDNHIPVGPGRGSAAGSLVAYSLKITNIDPVRHGLLFERFLNPERKSMPDIDTDFCIDQREKVIEYVTEKYGKNNVAQIITFNRMTSKAVLRDVARVLGIPLSDADRMAKLIPVSRGKPTKLKVMVSKDTPCKEFKEKYENDPQITRWIDMAMRIEGTNKTFGVHAAGVVISSQPLDEAIPLQRNNEGSTIVQYSMEDVESMGLLKMDFLGLKNLTILQKAADLVKEN-------QNIDLDLDQLPLDERRALEIKEKGKLNKLPGDIDKTYKLFKAGNLEGIFQ 635          
BLAST of Gvermi12945.t1 vs. uniprot
Match: K9W8G9_9CYAN (DNA-directed DNA polymerase n=3 Tax=Oscillatoriales TaxID=1150 RepID=K9W8G9_9CYAN)

HSP 1 Score: 535 bits (1378), Expect = 9.920e-179
Identity = 304/642 (47.35%), Postives = 390/642 (60.75%), Query Frame = 0
Query:   18 YVPLHVHSHYSLLDGASQLPSLVAKAAELDVPALALTDHGVLYGAVQLVRACSETEVKPIIGNEMYIVN-DIPDGQPNGKGPKRYHLI------------------------------------------YREGLIVSSACLRGEIAQAILNDDIDSARTVASWFRDVFRDDVYLEIQDHGSEEDKKVKPVMVQLSKELSIKVIDTNDSHFTSCLDAEAHDALICIQTRKRLSDENRLRYSGTEYFKSVDEMRQCFVDHPPLPAVDEALYNTLCVDDIF------------------GSSHDAYLRHVAQLGLQERLKARIKSGLIRTGSERTYIERLELELDMIRRMGFSSYFLVVWDYIHFARTNSMPVGPGRGSAAGSLVAFALRITDVDPIPFNLLFERFLNIERKSMPDIDTDVSVEGREKVIAYVTERYGQSRVAQIITFNRLTI----------------------------------------------DFKKAVESRPDYGEWLDKAQRIEEKNKKFGIHAAGVVISANPMTDIVPLTKAKHGETITQYAMEDVESVDLLKMDFLFLKNLTVIDKTLKFINQGRR------EQGNDEDLHFSVDA------LPLDDENTFRLLSEGELDGIFQ 540
            +V LH+HS YSLLDGASQLP L+ +A +L++PA+ALTDHGV+YGA++L++ C    +KPIIGNEMY++N DI D     K  ++YH +                                          YREGLIV+SACL GE+ QAIL +D   AR VA W++ VF DD YLEIQDHGS ED+ V   +V++++EL IK++ TNDSHF SC D EAHDAL+CIQT K +S++ R+RYSGTEY KS DEM + F DH P   + EA+ NT+ V D                    G + D Y+  +A  GL +RLK R +S +        Y +RLE EL M+++MGFS+YFLVVWDYI FAR N++PVGPGRGSAAGSLVA+AL+IT++DP+   LLFERFLN ERKSMPD+DTD  +E R+KVI YVTE+YG+ RVAQIITFNRLT                                               +F++A ++ P    W+D A RIE  NK FG+HAAGVVISA P+ +IVPL     G  ITQY MED+ES+ LLKMDFL LKNLT I KT + I++         E    E   FS+ A      LP+D + T++LL +G+L+GIFQ
Sbjct:    3 FVGLHIHSDYSLLDGASQLPELIDRALKLEMPAIALTDHGVMYGAIELLKVCRGRNIKPIIGNEMYVINGDIED---KSKRCRKYHQVVLAKNTQGYKNLVKLTTISHLKGVQGKGIFSRPCVNKDLLKQYREGLIVTSACLGGEVPQAILKNDPQLAREVAQWYKQVFGDDYYLEIQDHGSIEDRIVNVEIVKIARELGIKIVATNDSHFISCYDVEAHDALLCIQTGKLISEDKRMRYSGTEYLKSADEMAKLFRDHLPDEVIQEAIANTVEVADKIKPYDIMGEPRIPDYPVPKGHTADTYIEELAWDGLLQRLKCRSRSDI-----NPVYKQRLEYELKMLQQMGFSTYFLVVWDYIKFARDNNIPVGPGRGSAAGSLVAYALKITNIDPVHHGLLFERFLNPERKSMPDVDTDFCIEKRDKVIEYVTEKYGKERVAQIITFNRLTSKAVLKDVARVLNIPYKEADQMAKLIPVVRGKPTKLSVMISEETPAPEFREAYKNDPRVQHWVDMAIRIEGTNKTFGVHAAGVVISAEPLDEIVPLQVNNDGSVITQYFMEDLESLGLLKMDFLGLKNLTTIQKTAELISKSENFAIDLDELAIAERKAFSILAKGEINKLPIDIKKTYKLLEQGDLEGIFQ 636          
BLAST of Gvermi12945.t1 vs. uniprot
Match: A0A218QHC1_9CYAN (DNA-directed DNA polymerase n=3 Tax=Cyanobacteria TaxID=1117 RepID=A0A218QHC1_9CYAN)

HSP 1 Score: 531 bits (1367), Expect = 3.530e-177
Identity = 306/641 (47.74%), Postives = 384/641 (59.91%), Query Frame = 0
Query:   18 YVPLHVHSHYSLLDGASQLPSLVAKAAELDVPALALTDHGVLYGAVQLVRACSETEVKPIIGNEMYIVNDIPDGQPNGKGPKRYHLI------------------------------------------YREGLIVSSACLRGEIAQAILNDDIDSARTVASWFRDVFRDDVYLEIQDHGSEEDKKVKPVMVQLSKELSIKVIDTNDSHFTSCLDAEAHDALICIQTRKRLSDENRLRYSGTEYFKSVDEMRQCFVDHPPLPAVDEALYNTLCVDDIF------------------GSSHDAYLRHVAQLGLQERLKARIKSGLIRTGSERTYIERLELELDMIRRMGFSSYFLVVWDYIHFARTNSMPVGPGRGSAAGSLVAFALRITDVDPIPFNLLFERFLNIERKSMPDIDTDVSVEGREKVIAYVTERYGQSRVAQIITFNRLTI----------------------------------------------DFKKAVESRPDYGEWLDKAQRIEEKNKKFGIHAAGVVISANPMTDIVPLTKAKHGETITQYAMEDVESVDLLKMDFLFLKNLTVIDKTLKFINQGR----------REQGNDEDLHFSVD--ALPLDDENTFRLLSEGELDGIFQ 540
            +VPLH+HS YSLLDGASQLP L+ +A  L + A+ALTDHGV+YGA++L++AC    +KPIIGNEMYI+N   D +   + P RYH I                                          Y EGLIV+SACL GEI QAIL++  D+AR VA W+++VF DD YLEIQDHGS+ED+ V   +++++KEL IK + TNDSH+ SC D EAHDAL+CIQT K +S++NR+RYSGTEY KS +EM Q F DH P   + EA+  T  V D                    G + D Y+  VA  GL ERL    +  +    SE  Y ERLE EL M+++MGFS+YFLVVWDYI FAR N +PVGPGRGSAAGSLVA+A+RIT++DP+   LLFERFLN ERKSMPDIDTD  +E R+KVI YVTE+YG  RVAQIITFNRLT                                               DFK   ++ P    W+D A RIE  NK FG+HAAGVVISA+P+ +IVPL K   G  ITQY MED+ES+ LLKMDFL L+NLT+I+KT+  I Q R          R++   + +    +   LP + +  + LL  GEL+GIFQ
Sbjct:    3 FVPLHIHSDYSLLDGASQLPELIDQALALGMKAIALTDHGVMYGAIELIKACRSRNIKPIIGNEMYIING--DIEKQERRP-RYHQIVLAKNTKGYKNLVKLTTISHLKGVQGKGIFSRPCINKDLLKEYHEGLIVTSACLGGEIPQAILSNRPDAARKVAQWYKEVFGDDFYLEIQDHGSQEDRIVNVEIIKIAKELGIKFVATNDSHYISCFDVEAHDALLCIQTGKLISEDNRMRYSGTEYLKSAEEMSQLFRDHLPDDVIAEAINTTEEVSDKVEPYQLMGEPRIPNYPIPSGHTADTYVEEVAWQGLLERLN---RKSINEVDSE--YKERLEYELKMLQKMGFSTYFLVVWDYIKFARDNKIPVGPGRGSAAGSLVAYAMRITNIDPVHHGLLFERFLNPERKSMPDIDTDFCIEQRDKVIEYVTEKYGTERVAQIITFNRLTSKAVLKDVARVLNIPYSESDKMAKLIPVVRGKPTKLKVMISNATPEPDFKAKYDNEPHVRHWVDMAMRIEGTNKTFGVHAAGVVISADPLDEIVPLQKNNDGSVITQYFMEDLESMGLLKMDFLGLRNLTLIEKTVDLIKQTRGYDIDTDEITRQERRAQQILAKGEHNVLPNEVKKAYELLEAGELEGIFQ 635          
BLAST of Gvermi12945.t1 vs. uniprot
Match: A0A2P8VZQ3_9CYAN (DNA-directed DNA polymerase n=13 Tax=Cyanobacteria TaxID=1117 RepID=A0A2P8VZQ3_9CYAN)

HSP 1 Score: 530 bits (1366), Expect = 3.730e-177
Identity = 303/633 (47.87%), Postives = 383/633 (60.51%), Query Frame = 0
Query:   18 YVPLHVHSHYSLLDGASQLPSLVAKAAELDVPALALTDHGVLYGAVQLVRACSETEVKPIIGNEMYIVN-DIPDGQPNGKGPKRYHLI------------------------------------------YREGLIVSSACLRGEIAQAILNDDIDSARTVASWFRDVFRDDVYLEIQDHGSEEDKKVKPVMVQLSKELSIKVIDTNDSHFTSCLDAEAHDALICIQTRKRLSDENRLRYSGTEYFKSVDEMRQCFVDHPPLPAVDEALYNTLCVDD-------IFGSSH--------------DAYLRHVAQLGLQERLKARIKSGLIRTGSERTYIERLELELDMIRRMGFSSYFLVVWDYIHFARTNSMPVGPGRGSAAGSLVAFALRITDVDPIPFNLLFERFLNIERKSMPDIDTDVSVEGREKVIAYVTERYGQSRVAQIITFNRLTI----------------------------------------------DFKKAVESRPDYGEWLDKAQRIEEKNKKFGIHAAGVVISANPMTDIVPLTKAKHGETITQYAMEDVESVDLLKMDFLFLKNLTVIDKTLKFINQGRREQGNDEDLHFSVDALPLDDENTFRLLSEGELDGIFQ 540
            +V LH+HS YSLLDGASQLP LV +A EL +PA+ALTDHGV+YGA++L++ C    +KPIIGNEMY++N DI   Q       RYH +                                          Y EGLIV+SACL GE+ QAIL    D AR VA W++D+F +D YLEIQDHGS ED+ V   ++++++EL IKVI TNDSH+ SC D EAHDAL+CIQT K L+++ RLRYSGTEY KS DEMR+ F DH     ++EA+ NTL V +       I G S                AY+ HVA+ GL +R++A     +     E+ Y +RLE E++M+ +MGF +YFLVVWDYI FAR N++PVGPGRGSAAGSLVA+A+ IT++DPI   LLFERFLN ERKSMPDIDTD  ++ RE+VI YVT RYG+ RVAQIITFNR+T                                               +FK+  E+ P    W+D A RIE  NK FG+HAAGVVIS +P+ +IVPL +   G+ ITQY MEDVE++ LLKMDFL L+NLT+I KTL  I     E+          DALP+DD  TF+LL  G+L G+FQ
Sbjct:    3 FVGLHIHSAYSLLDGASQLPQLVERAKELGMPAIALTDHGVMYGAIELIKVCKGAGIKPIIGNEMYLINGDISQQQRR----PRYHQVVLAKNTQGYKNLVKLTTISHLQGVQGKGIFSRPCINKDLLEQYHEGLIVTSACLGGEVPQAILQKRPDVARKVAQWYKDLFGEDYYLEIQDHGSPEDRVVNVEILKIAQELDIKVICTNDSHYISCNDVEAHDALLCIQTGKLLTEDKRLRYSGTEYVKSADEMRRLFRDHISEDVIEEAIVNTLEVAEKVEEYTGILGQSRIPDFPIPPEFNEDAGAYMGHVAKEGLVKRMRAASYEEI-----EQEYRDRLEYEIEMMIQMGFPTYFLVVWDYIRFARDNNIPVGPGRGSAAGSLVAYAMEITNIDPIHHGLLFERFLNPERKSMPDIDTDFCIDRREEVIQYVTRRYGEERVAQIITFNRMTSKAVLKDVARVLDIPYAESDRMAKLIPVARGKPTKLKVMISDDTPAPEFKEKYENDPQTQRWIDMALRIEGTNKTFGMHAAGVVISKDPLDEIVPLQRNNDGQVITQYYMEDVEALGLLKMDFLGLRNLTMIQKTLDLIEATHGEK-------IDPDALPMDDPATFKLLERGDLGGVFQ 619          
BLAST of Gvermi12945.t1 vs. uniprot
Match: A0A1Z3HTD9_9CYAN (DNA-directed DNA polymerase n=1 Tax=Halomicronema hongdechloris C2206 TaxID=1641165 RepID=A0A1Z3HTD9_9CYAN)

HSP 1 Score: 530 bits (1364), Expect = 6.620e-177
Identity = 303/632 (47.94%), Postives = 381/632 (60.28%), Query Frame = 0
Query:   18 YVPLHVHSHYSLLDGASQLPSLVAKAAELDVPALALTDHGVLYGAVQLVRACSETEVKPIIGNEMYIVN-DIPDGQPNGKGPKRYHLI------------------------------------------YREGLIVSSACLRGEIAQAILNDDIDSARTVASWFRDVFRDDVYLEIQDHGSEEDKKVKPVMVQLSKELSIKVIDTNDSHFTSCLDAEAHDALICIQTRKRLSDENRLRYSGTEYFKSVDEMRQCFVDHPPLPAVDEALYNTLCV-------DDIFGSSH-------------DAYLRHVAQLGLQERLKARIKSGLIRTGSERTYIERLELELDMIRRMGFSSYFLVVWDYIHFARTNSMPVGPGRGSAAGSLVAFALRITDVDPIPFNLLFERFLNIERKSMPDIDTDVSVEGREKVIAYVTERYGQSRVAQIITFNRLTI----------------------------------------------DFKKAVESRPDYGEWLDKAQRIEEKNKKFGIHAAGVVISANPMTDIVPLTKAKHGETITQYAMEDVESVDLLKMDFLFLKNLTVIDKTLKFINQGRREQGNDEDLHFSVDALPLDDENTFRLLSEGELDGIFQ 540
            +V LH+HS+YSLLDGASQLP LV +A EL +PA+ALTDHGV+YGA+++++ C    +KPIIGNEMYI+N DI   Q       RYH +                                          Y EGLIV+SACL GE+ QAIL    D AR VA W++D   DD YLEIQDHGS ED+ V   +V++++EL IK+I TNDSH+ SC D EAHDAL+CIQT K L+++ RLRYSGTEY KS DEMRQ F DH     +DEA++ TL V        DI G                + Y+ HVA+ GL +R+K   + G +    +  Y ERLE E+ ++ +MGF +YFLVVWDYI FAR N +PVGPGRGSAAGSLVA+A+ IT++DP+   LLFERFLN ERKSMPDIDTD  +E R++VI YVTERYG+ RVAQIITFNR+T                                               +FK+  +S P    W+D A RIE  NK FG+HAAGVVIS  P+ +IVPL +   G+ ITQY MEDVE++ LLKMDFL LKNLT+I KT+  I Q   +Q + +DL       P+DD   F+LL +G+L GIFQ
Sbjct:    3 FVGLHIHSNYSLLDGASQLPQLVDRAVELGMPAIALTDHGVMYGAIEILKLCKGKGIKPIIGNEMYIINGDITQQQRR----PRYHQVVLAKNTQGYKNLVKLTTISHLQGVQGKGIFSRPCINKELLEQYHEGLIVTSACLGGEVPQAILQKRPDVARRVAQWYKDRCGDDYYLEIQDHGSPEDRIVNVELVKIARELDIKIICTNDSHYISCNDVEAHDALLCIQTGKLLTEDKRLRYSGTEYLKSADEMRQLFRDHLSDEVIDEAIHTTLEVADKVEEYTDILGQPRIPDFPIPEGFEGAEDYMAHVAKEGLVKRMKVS-RYGEV----DPVYRERLEYEIQLMIQMGFPTYFLVVWDYIRFARDNKIPVGPGRGSAAGSLVAYAMGITNIDPVHHGLLFERFLNPERKSMPDIDTDFCIERRDEVIKYVTERYGEERVAQIITFNRMTSKAVLKDVARVLDIPYGEADRMAKLIPVARGKPAKLKVMISDETPAPEFKQKYDSDPQVHRWIDMAMRIEGTNKTFGVHAAGVVISKEPLDEIVPLQRNNDGQVITQYYMEDVEAIGLLKMDFLGLKNLTMIQKTVDLIEQSHGQQVDPDDL-------PMDDPKAFKLLEKGDLGGIFQ 618          
The following BLAST results are available for this feature:
BLAST of Gvermi12945.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IIA4_9FLOR3.740e-27968.47DNA-directed DNA polymerase n=1 Tax=Gracilariopsis... [more]
R7QIL0_CHOCR1.270e-23861.78DNA-directed DNA polymerase n=1 Tax=Chondrus crisp... [more]
A0A2D2Q3N2_THELV3.470e-18249.36DNA-directed DNA polymerase n=1 Tax=Synechococcus ... [more]
UPI0002AC3BC61.020e-18148.19DNA polymerase III subunit alpha n=1 Tax=Leptolyng... [more]
Q8DHA3_THEVB2.770e-18149.52DNA-directed DNA polymerase n=6 Tax=Cyanobacteria ... [more]
UPI001EF2DFCC3.210e-18046.69DNA polymerase III subunit alpha n=1 Tax=Spirulina... [more]
K9W8G9_9CYAN9.920e-17947.35DNA-directed DNA polymerase n=3 Tax=Oscillatoriale... [more]
A0A218QHC1_9CYAN3.530e-17747.74DNA-directed DNA polymerase n=3 Tax=Cyanobacteria ... [more]
A0A2P8VZQ3_9CYAN3.730e-17747.87DNA-directed DNA polymerase n=13 Tax=Cyanobacteria... [more]
A0A1Z3HTD9_9CYAN6.620e-17747.94DNA-directed DNA polymerase n=1 Tax=Halomicronema ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003141Polymerase/histidinol phosphatase, N-terminalSMARTSM00481npolultracoord: 19..86
e-value: 4.9E-24
score: 95.9
IPR011708Bacterial DNA polymerase III, alpha subunit, NTPase domainPFAMPF07733DNA_pol3_alphacoord: 260..405
e-value: 1.1E-54
score: 185.8
coord: 408..484
e-value: 1.6E-18
score: 67.2
IPR004013PHP domainPFAMPF02811PHPcoord: 21..87
e-value: 4.0E-18
score: 66.4
IPR004013PHP domainPFAMPF02811PHPcoord: 103..154
e-value: 6.2E-6
score: 26.7
NoneNo IPR availableGENE3D3.20.20.140coord: 105..252
e-value: 1.5E-41
score: 144.2
coord: 2..104
e-value: 1.3E-29
score: 105.0
IPR040982DNA polymerase III alpha subunit finger domainPFAMPF17657DNA_pol3_fingercoord: 488..540
e-value: 8.2E-5
score: 22.0
IPR004805DNA polymerase III, alpha subunitPANTHERPTHR32294DNA POLYMERASE III SUBUNIT ALPHAcoord: 18..102
coord: 408..540
coord: 105..405
IPR016195Polymerase/histidinol phosphatase-likeSUPERFAMILY89550PHP domain-likecoord: 19..232

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_425contigScGOVlb_425:2350158..2352102 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi12945.t1Gvermi12945.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_425 2350158..2352102 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi12945.t1 ID=Gvermi12945.t1|Name=Gvermi12945.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=541bp
LQSPADRASVDVLPPNQYVPLHVHSHYSLLDGASQLPSLVAKAAELDVPA
LALTDHGVLYGAVQLVRACSETEVKPIIGNEMYIVNDIPDGQPNGKGPKR
YHLIYREGLIVSSACLRGEIAQAILNDDIDSARTVASWFRDVFRDDVYLE
IQDHGSEEDKKVKPVMVQLSKELSIKVIDTNDSHFTSCLDAEAHDALICI
QTRKRLSDENRLRYSGTEYFKSVDEMRQCFVDHPPLPAVDEALYNTLCVD
DIFGSSHDAYLRHVAQLGLQERLKARIKSGLIRTGSERTYIERLELELDM
IRRMGFSSYFLVVWDYIHFARTNSMPVGPGRGSAAGSLVAFALRITDVDP
IPFNLLFERFLNIERKSMPDIDTDVSVEGREKVIAYVTERYGQSRVAQII
TFNRLTIDFKKAVESRPDYGEWLDKAQRIEEKNKKFGIHAAGVVISANPM
TDIVPLTKAKHGETITQYAMEDVESVDLLKMDFLFLKNLTVIDKTLKFIN
QGRREQGNDEDLHFSVDALPLDDENTFRLLSEGELDGIFQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003141Pol/His_phosphatase_N
IPR011708DNA_pol3_alpha_NTPase_dom
IPR004013PHP_dom
IPR040982DNA_pol3_finger
IPR004805PolC_alpha
IPR016195Pol/histidinol_Pase-like