Gvermi8140.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi8140.t1
Unique NameGvermi8140.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length548
Homology
BLAST of Gvermi8140.t1 vs. uniprot
Match: A0A2V3IW64_9FLOR ((6-4)DNA photolyase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IW64_9FLOR)

HSP 1 Score: 766 bits (1977), Expect = 2.910e-274
Identity = 357/537 (66.48%), Postives = 426/537 (79.33%), Query Frame = 0
Query:   11 SGSVLHWFRRDLRLADNLALNAAVRLAREKETPLIPLYVVDPALEPEKCSVARMRFLRESVCSLQSNLLEHGLHLRVVVGHANKVLPELAQRWSAKNVFWEREYAPQPRRRDDSISSELKSLDIQVHTFDGFLLYDPDQLLRHCDGCAPRNMNGMLNLVDSVGDPEKPKNFADGKTVSFEKDPYFTGDKDENMMSFPSLVDLGYEDVENKWTVFRGGEDEGLKRMDDFLRLKNGRTAADFSKPKTSPATFSTRETTVLSPYFALGCVSCRSFYARLREIEQRYKLNEMRQTTLLGQLIWREHFWLLAYTIEHFHQMRGNSVCRQINWRNEKESSKFLECWAEARTGFPWIDALMTQLRNEGFIHHLGRHSLACFLTRGDLWVSWEEGFKVFEKYLLDYDYALNSANWMWLSCSAFFVMYYRVYSPVAFGKKWDKDGEFIRHYLPVLKKMPSKYIYEPWKAPEAVQKKAGCIIGKDYPKPIVDHAKVSKENIEKMKKEYAKKEFGKLE-QVSGEPLKNENDGPNSEGSVDSPRKKRRR 546
            S +VLHWFRRDLRL DN ALN A+R+A++ ++PLIPLY++DP L P+ CS  RMRFLRESV  L+S+LL+HGL+LRVV G A +V+P+LA RW  ++ FWE EY P  R RD  ++ +LK   + V TF GFLLYDPD +LRHC+G APR M GML LV+ +GDP  P +FA+G+ V FE+DP+   D+ + M   PSL DLGY+D EN+W VF GGE  GLKR+  F++ KNGR  ADF+KPKT+PA FS RETTVLSPY ALGCVSCR F+ RLRE+EQRY L EM QTTL GQLIWREHFWLLAY++++FHQMRGN VCRQINWR +K+S + L  WAEARTGFPWIDALMTQL  EGFIHHLGRHSLACFLTRGDLW+SWE GFKVFEKYL+DYDYALNSANWMWLSCSAFFVMYYRVYSPV +GKKWDKDG FIRHYLPVL+ MPSKYIYEPWKAP+ +Q++ GCIIGKDYP+PIVDH   S+ NI +MK+ + K EFGKLE +     + + N+   +   V  P +KRRR
Sbjct:    3 SPAVLHWFRRDLRLTDNRALNEAIRVAKKTKSPLIPLYILDPNLIPQNCSAVRMRFLRESVSQLRSSLLKHGLNLRVVRGQATQVIPDLAGRWRVRDTFWESEYDPVSRERDAQVARDLKGSGVNVRTFPGFLLYDPDDVLRHCNGLAPRTMTGMLKLVEILGDPRTPDSFANGELVEFEEDPFLYEDRAQGMCDIPSLADLGYQDPENRWDVFEGGEKAGLKRLHRFVKQKNGRIVADFAKPKTNPAAFSHRETTVLSPYLALGCVSCRVFHERLREVEQRYALQEMPQTTLWGQLIWREHFWLLAYSVKNFHQMRGNVVCRQINWRADKQSEELLRTWAEARTGFPWIDALMTQLHKEGFIHHLGRHSLACFLTRGDLWISWERGFKVFEKYLIDYDYALNSANWMWLSCSAFFVMYYRVYSPVTYGKKWDKDGNFIRHYLPVLRTMPSKYIYEPWKAPKELQRRVGCIIGKDYPEPIVDHRTASQCNIARMKESFEKGEFGKLEDETESRVIASANNSIITSDDVREPYRKRRR 539          
BLAST of Gvermi8140.t1 vs. uniprot
Match: R7QKC4_CHOCR (Cryptochrome/photolyase n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QKC4_CHOCR)

HSP 1 Score: 634 bits (1634), Expect = 5.410e-222
Identity = 312/549 (56.83%), Postives = 393/549 (71.58%), Query Frame = 0
Query:    9 TVSGSVLHWFRRDLRLADNLALNAAVRLAREKETPLIPLYVVDPALE-PEKCSVARMRFLRESVCSLQSNLLEH-GLHLRVVVGHANKVLPELAQRWSAKNVFWEREYAPQPRRRDDSISSELKSLDIQVHTFDGFLLYDPDQLLRHCDGC-APRNMNGMLNLVDSVGDPEKPKNFADGKTVSFEKDPYFT--GDKDENMMSFPSLVDLGYEDVENK--WTVFRGGEDEGLKRMDDFLRLKNGRTAADFSKPKTSPATFSTRETTVLSPYFALGCVSCRSFYARLREIEQRYKLNEMRQTTLLGQLIWREHFWLLAYTIEHFHQMRGNSVCRQINWRNEKESSKFLECWAEARTGFPWIDALMTQLRNEGFIHHLGRHSLACFLTRGDLWVSWEEGFKVFEKYLLDYDYALNSANWMWLSCSAFFVMYYRVYSPVAFGKKWDKDGEFIRHYLPVLKKMPSKYIYEPWKAPEAVQKKAGCIIGKDYPKPIVDHAKVSKENIEKMKKEYAKKEFG----KLEQVSGEPLKNENDGPNSEGSVDSPRKKRRR 546
            T+ GSVLHWFRRDLR ADN ALN A+ LA++   PLIP++ +DP    P  C   RMRF+ ES+ +LQ +L +     LRV+      V P+L +RW  K++ +E EYAP  R RD+++ ++++  D+ V    GF LY+P+ LL+   G  AP  M+  L+LVD VGDPE P  FADG+ V     P  T   D  +  +  P L D+GYED   +  W  FRGGE+EG+ RMD+FL  + G+ AA F+KPKTSPA F  RETTVLSPY ALGCVS R F+ARLR++E+ + + EM QT L GQL+WREHFWLLA  +  FH+M GN VCR+INWR   E+   L+ WAEARTG+PWIDALM QL+ EGF+HHLGRHSLACFLTRGDLWVSWEEG+KVFE YL+DYDYALNSANWMWLSCSAFF MY+RVYSPVAF KKWDK+G FI+HYLPVL+K+P+KYI+EPWKAP  VQK AGC+IGKDYP+ +VDH+K SKENI KMK+ YA+ E+G    + + ++GE   +E+       S  + R+K RR
Sbjct:    2 TLPGSVLHWFRRDLRTADNRALNRAISLAKKSNLPLIPVFFLDPEYHNPTACGPLRMRFILESISALQRSLDDKCSSRLRVICARPTDVFPDLVRRWGVKHLVFEYEYAPSERARDEAVVADVEGFDVDVVREHGFTLYNPNVLLQKAKGATAPTTMSSFLSLVDDVGDPENPVEFADGRQVELTSCPDATLKDDDKDGYLLVPKLGDIGYEDCTKQTGWERFRGGEEEGIARMDEFLSREGGKVAARFAKPKTSPAAFVKRETTVLSPYLALGCVSSRVFHARLRDLEENHDVAEMPQTRLWGQLMWREHFWLLAGMVPEFHRMNGNPVCRKINWRTGDEAELRLKTWAEARTGYPWIDALMMQLKTEGFVHHLGRHSLACFLTRGDLWVSWEEGYKVFEHYLVDYDYALNSANWMWLSCSAFFSMYFRVYSPVAFAKKWDKEGAFIKHYLPVLRKLPTKYIHEPWKAPAMVQKMAGCVIGKDYPERMVDHSKASKENIAKMKENYARNEYGAERGERQHMNGESRSSESRDSGDGTSRKTKRRKTRR 550          
BLAST of Gvermi8140.t1 vs. uniprot
Match: A0A7S1ETW7_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1ETW7_9RHOD)

HSP 1 Score: 458 bits (1179), Expect = 2.100e-152
Identity = 232/509 (45.58%), Postives = 322/509 (63.26%), Query Frame = 0
Query:   12 GSVLHWFRRDLRLADNLALNAAVRLAREKETPLIPLYVVDPA-LEPEKCSVARMRFLRESVCSLQSNLLEHGLHLRVVVGHANKVLPELAQRWSAKNVFWEREYAPQPRRRDDSISSELKSLDIQVHTFDGFLLYDPDQLLRHCDGC-APRNMNGMLNLVDSVGDPEKPKNFAD--GKTVSFEK-DP-------YFTGDK---DENMMSFPSLVDLGYEDVENKWTVFRGGEDEGLKRMDDFLRLKNGRTAADFSKPKTSPATFSTRETTVLSPYFALGCVSCRSFYARLREIEQRYKLNEMRQTTLLGQLIWREHFWLLAYTI-EHFHQMRGNSVCRQINWRNEKESSKFLECWAEARTGFPWIDALMTQLRNEGFIHHLGRHSLACFLTRGDLWVSWEEGFKVFEKYLLDYDYALNSANWMWLSCSAFFVMYYRVYSPVAFGKKWDKDGEFIRHYLPVLKKMPSKYIYEPWKAPEAVQKKAGCIIGKDYPKPIVDHAKVSKENIEKM 504
            G V+ WFR+ LR+ DNLAL +AV+ A + ++ ++P++ +DP  L+PEK    R+ FL ES+C L  NL + G  L ++ G  + VL +  Q  +A  +++ER+  P  ++RD  I    +  +++V T  G  L+D + LL+ C    AP +M   L L+DSVG+PE P +     G + + EK DP       Y   D     +++     LV  GY +++     F+GGE E L  ++ F +  +G+    FSKP TSP  F  + TT LS Y   GC+S R F+ R+       K       +L+GQL WREHF+LL Y     F  M+GN++CRQI+WR  +E   F   W E RTGFPWIDA M QLR EG++HHL RHS+ACFLTRGDLW+SWE G KVF++YL+D D+++N+ANWMWLSCSAFF  Y+RVYSP+AF KK+DK G F+R Y+P LK +P KYIYEPW AP  VQKKA C++G DYP+PIVDH+  SK+N+++M
Sbjct:   72 GPVVVWFRKGLRIHDNLALASAVKYATQSKSTILPVFTLDPYFLDPEKVGAVRLSFLLESLCDLDLNLKKFGSALLLLKGSPDSVLIDFLQSKNASALYFERDSEPYAKKRDAEIVQLCEKSNVKVFTEHGHTLFDLEYLLKQCTNKKAPSSMPEFLRLMDSVGNPETPLSLERVLGVSNTNEKLDPCLQIPAEYLDSDSFKIPKSLEDDEDLVKSGYRNIDASGAKFKGGESEALLMLESFCKRDSGKAVEQFSKPHTSPCAFDPQSTTGLSAYLKFGCISARRFFHRIVS-----KAKTQPPVSLVGQLYWREHFYLLGYAHGASFSTMKGNALCRQIDWRTTEEEPDFARAWEEGRTGFPWIDACMRQLRQEGWLHHLARHSVACFLTRGDLWISWEFGQKVFDRYLIDADWSINAANWMWLSCSAFFHQYFRVYSPIAFPKKYDKSGHFVRKYVPELKDIPDKYIYEPWNAPADVQKKAKCVVGIDYPRPIVDHSVASKQNMDRM 575          
BLAST of Gvermi8140.t1 vs. uniprot
Match: UPI0009E5366C (cryptochrome-1-like n=2 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E5366C)

HSP 1 Score: 443 bits (1140), Expect = 1.980e-147
Identity = 237/494 (47.98%), Postives = 307/494 (62.15%), Query Frame = 0
Query:   15 LHWFRRDLRLADNLALNAAVRLAREKETPLIPLYVVDPA-LEPEKCSVARMRFLRESVCSLQSNLLEHGLHLRVVVGHANKVLPELAQRWSAKNVFWEREYAPQPRRRDDSISSELKSLDIQVHTFDGFLLYDPDQLLRHCDGCAPRNMNGMLNLVDSVGDPEKPKNFADGKTVSFEKDPYFTGDKDENMMSFPSLVDLGYEDVENKWTV-FRGGEDEGLKRMDDFLRLKNGRTAADFSKPKTSPATFSTRETTVLSPYFALGCVSCRSFYARLREIEQRYKLNEMRQTTLLGQLIWREHFWLLAYTIEHFHQMRGNSVCRQINWRNEKESSKFLECWAEARTGFPWIDALMTQLRNEGFIHHLGRHSLACFLTRGDLWVSWEEGFKVFEKYLLDYDYALNSANWMWLSCSAFFVMYYRVYSPVAFGKKWDKDGEFIRHYLPVLKKMPSKYIYEPWKAPEAVQKKAGCIIGKDYPKPIVDHAKVSKENIEKMKK 506
            +HWFR+ LRL DN +L    R A E    L P+Y +DP  ++       R RFL +S+  L +NL   G  L V+ G     LP L + W    + +E ++ P  R+RD  I        I+V T     LYD D+++    G AP     + ++V S+G P KP    D +      D   T   DEN    P+L +LG E  E   TV F GGE E L+R+D+ +  ++      F KP TSP +     TTVLSPY   GC+S R FY RL E+  R K +     +L GQL+WRE F+  AY   +F++M GN VC Q+ W    E   F++ W+EARTG+P+IDA+MTQLR EG+IHHL RH++ACFLTRGDLW+SWEEG KVFEKYLLD+D++LN+ NWMWLS SAFF  Y+RVYSPVAFGKK D +G++I+ Y+PVLKK P KYIYEPW AP++VQK AGC+IGKDYP+PIVDH  V K NI +MKK
Sbjct:   12 IHWFRKGLRLHDNQSL----REACETSLTLRPVYFIDPDYVKHGNMGFNRWRFLIQSLNDLDNNLKSLGSRLFVIQGKPELELPRLFKAWRITRLTFEVDHEPDGRQRDSKICELASEAGIEVETRVCHSLYDLDKVIEKNGGAAPLTYKKLCSVVSSMGPPLKPVPAVDEQLF----DGCSTPVDDENEYKLPTLEELGIEMPEESSTVLFPGGETEALRRLDEHMEKEDW--VCKFEKPNTSPNSLQP-STTVLSPYVMFGCLSARLFYHRLSEVYSRAKKHSSPPVSLHGQLLWREFFFTAAYATPNFNRMEGNPVCLQVPWDTNPE---FVKAWSEARTGYPFIDAIMTQLRREGWIHHLARHAVACFLTRGDLWISWEEGLKVFEKYLLDHDWSLNAGNWMWLSASAFFHAYFRVYSPVAFGKKTDPNGDYIKKYIPVLKKYPPKYIYEPWTAPQSVQKAAGCVIGKDYPRPIVDHKVVVKTNITRMKK 491          
BLAST of Gvermi8140.t1 vs. uniprot
Match: H2MAP7_ORYLA (Cryptochrome-1 n=10 Tax=Oryzias TaxID=8089 RepID=H2MAP7_ORYLA)

HSP 1 Score: 442 bits (1137), Expect = 3.330e-147
Identity = 231/504 (45.83%), Postives = 324/504 (64.29%), Query Frame = 0
Query:   15 LHWFRRDLRLADNLALNAAVRLAREKETPLIPLYVVDPALEPEKCS-VARMRFLRESVCSLQSNLLEHGLHLRVVVGHANKVLPELAQRWSAKNVFWEREYAPQPRRRDDSISSELKSLDIQVHTFDGFLLYDPDQLLRHCDGCAPRNMNGMLNLVDSVGDPEKPKNFADGKTVSFEKDPYFTGDKDENMMSFPSLVDLGYEDVENKWTVFRGGEDEGLKRMDDFLRLKNGRTAADFSKPKTSPATFSTRETTVLSPYFALGCVSCRSFYARLREIEQRYKLNEMRQTTLLGQLIWREHFWLLAYTIEHFHQMRGNSVCRQINWRNEKESSKFLECWAEARTGFPWIDALMTQLRNEGFIHHLGRHSLACFLTRGDLWVSWEEGFKVFEKYLLDYDYALNSANWMWLSCSAFFVMYYRVYSPVAFGKKWDKDGEFIRHYLPVLKKMPSKYIYEPWKAPEAVQKKAGCIIGKDYPKPIVDHAKVSKENIEKMKKEYAKKEFGKLE 517
            +HWFR+ LRL DN AL AA+R  +E    L PL+++DP L  +  + + R+RFL  S+  L  +L +    L VV G   +VLP+L  +W+   + +E +  P  R RD +++   +   IQV       LYD D+++   +G  P   N + ++V ++G P+KP       TV   K+     +K +     PSL +LG +       +F GGE E L+R+D +++         F KP TSP + S   TTVLSPY   GC+S R+F+ RL E+ Q  K ++    +L GQL+WRE F+  +  I +F++M GN  C Q++W    E+ ++L  W EARTGFP+IDA+MTQLR EG+IHHL RH++ACFLTRGDLW+SWEEG KVFEK LLD D+ALN+ NW WLS S FF  ++RVYSPVAFGKK DK+G++I+ YLP+LKK P +YIYEPWKAP +VQ+ AGCI+GKDYPKPI++H  +SK+NI++MK+ YA++  G  E
Sbjct:    6 IHWFRKGLRLHDNPALMAALRDCKE----LYPLFILDPYLYDQNLAGINRLRFLISSLQDLDCSLRKLNSRLFVVRGKPEEVLPKLFTKWNVTKLTYEYDTEPYSRSRDKNVTMLAEEQRIQVIYKISHTLYDIDRIIEENNGKPPLTYNRLRDIVKALGSPKKP---IPAPTVEDMKNIAPFSEKHKPEYGIPSLEELGLDTSSLAEEIFPGGEQEALRRLDTYMQRPGW--VCSFEKPNTSPNSLSP-STTVLSPYVTFGCLSARTFWWRLAEVYQGKKHSDP-PVSLHGQLLWREFFYTASVGIPNFNKMTGNPACTQVDW---DENQEYLAAWREARTGFPFIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGQKVFEKLLLDGDWALNAGNWQWLSASTFFHQFFRVYSPVAFGKKTDKNGDYIKKYLPILKKFPPQYIYEPWKAPRSVQQAAGCIVGKDYPKPIIEHEVISKKNIQRMKQAYARRTSGSTE 495          
BLAST of Gvermi8140.t1 vs. uniprot
Match: UPI0014459905 (cryptochrome circadian regulator 5 n=1 Tax=Epinephelus lanceolatus TaxID=310571 RepID=UPI0014459905)

HSP 1 Score: 436 bits (1122), Expect = 7.380e-145
Identity = 239/534 (44.76%), Postives = 327/534 (61.24%), Query Frame = 0
Query:   15 LHWFRRDLRLADNLALNAAVRLAREKETPLIPLYVVDPALEPEKC-SVARMRFLRESVCSLQSNLLEHGLHLRVVVGHANKVLPELAQRWSAKNVFWEREYAPQPRRRDDSISSELKSLDIQVHTFDGFLLYDPDQLLRHCDGCAPRNMNGMLNLVDSVGDPEKPKNFADGKTVSFEKDPYFTGDKDENMMSFPSLVDLGYEDVENKWTV-FRGGEDEGLKRMDDFLRLKNGRTAADFSKPKTSPATFSTRETTVLSPYFALGCVSCRSFYARLREIEQRYKLNEMRQTTLLGQLIWREHFWLLAYTIEHFHQMRGNSVCRQINWRNEKESSKFLECWAEARTGFPWIDALMTQLRNEGFIHHLGRHSLACFLTRGDLWVSWEEGFKVFEKYLLDYDYALNSANWMWLSCSAFFVMYYRVYSPVAFGKKWDKDGEFIRHYLPVLKKMPSKYIYEPWKAPEAVQKKAGCIIGKDYPKPIVDHAKVSKENIEKMKKEYAKKEFGKLEQVSGEPLKNENDGPNSEGSVDSPRKKRRR 546
            +HWFR+ LRL DN AL AA+R  +E    L P++++DP L  +   S+ R RFL  ++  L  +L +    L VV G   +V PEL   W    + +E +  P    RD ++++  K   ++V       LYD D+++    G AP   N M  +V ++G P+KP      + V   K P    +  E     P L +LG+ D        F GGE E L+R+D+ +          F KP+TSP + S   TTVLSPY  LGC+S R+F+ RL ++ +  K +E    +L GQL+WRE F+  +  I +F++M+GN VC Q++W    E   FL  W EARTGFP+IDA+MTQLR EG+IHHL RH++ACFLTRGDLW++WEEG KVFE+ LLD D+ALN+ NW WLS S FF  ++RVYSPVAFGKK DK+G+FI+ YLP+LKK P++YIYEPWKAP +VQ+ AGCI+GKDYP PIV H  +SK+NI++MK  YAK+     E  S  P K +     +   VD  +KK +R
Sbjct:    6 IHWFRKGLRLHDNPALMAALRDCKE----LYPVFILDPHLHDKTLMSINRWRFLLGALEDLDCSLRKLHSRLFVVRGKPEEVFPELFDNWKVTKLTYEYDTEPYSLSRDKTVTTLAKEHGVEVIYKISHTLYDIDRIIEENSGKAPLTYNRMQAIVKTLGPPKKPIPAPTMEDVKDVKTP--CSESHEKKYGIPPLEELGHTDTAALGEAPFPGGEQEALRRLDEHMERTGW--VCSFEKPQTSPNSLSP-STTVLSPYVTLGCLSARTFWWRLTDVYRGRKHSEP-PVSLHGQLLWREFFYTASVGIPNFNKMKGNPVCTQVDWDTNPE---FLAAWREARTGFPFIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWINWEEGQKVFEELLLDGDWALNAGNWQWLSASTFFHQFFRVYSPVAFGKKTDKNGDFIKKYLPLLKKFPAQYIYEPWKAPRSVQQAAGCIVGKDYPHPIVQHEVISKQNIQRMKSAYAKRSANPAESPSSSPSKKQGVKRKAPSVVDMLKKKDKR 526          
BLAST of Gvermi8140.t1 vs. uniprot
Match: A0A6N0A1H0_BATAZ (6-4 photolyase (Fragment) n=1 Tax=Bathymodiolus azoricus TaxID=150808 RepID=A0A6N0A1H0_BATAZ)

HSP 1 Score: 436 bits (1121), Expect = 1.190e-144
Identity = 230/508 (45.28%), Postives = 316/508 (62.20%), Query Frame = 0
Query:   15 LHWFRRDLRLADNLALNAAVRLAREKETPLIPLYVVDPALEPE-KCSVARMRFLRESVCSLQSNLLEHGLHLRVVVGHANKVLPELAQRWSAKNVFWEREYAPQPRRRDDSISSELKSLDIQVHTFDGFLLYDPDQLLRHCDGCAPRNMNGMLNLVDSVGDPEKPKNFA-DGKTVSFEKDPYFTGDKDENMMSFPSLVDLGYEDVENKWTVFRGGEDEGLKRMDDFLRLKNGRTAADFSKPKTSPATFSTRETTVLSPYFALGCVSCRSFYARLREIEQRYKLNEMRQTTLLGQLIWREHFWLLAYTIEHFHQMRGNSVCRQINWRNEKESSKFLECWAEARTGFPWIDALMTQLRNEGFIHHLGRHSLACFLTRGDLWVSWEEGFKVFEKYLLDYDYALNSANWMWLSCSAFFVMYYRVYSPVAFGKKWDKDGEFIRHYLPVLKKMPSKYIYEPWKAPEAVQKKAGCIIGKDYPKPIVDHAKVSKENIEKMKKEYAKKEFGKLEQVS 520
            +HWFR+ LRL DN AL AA   A + +     ++++DP      K  V R RFL +++ +L  NL ++   L ++ G+   V P+L ++W   ++ +E +  P  + RD  I S  + L ++V T     LY+   ++    G AP     + N+V+    P  P +   + KT         T D  +     PS+ DLG+++ E    +F GGE EGLKR++  L+  N      F KPKT P T S   TTVLSPY   GCVS R+FY +L+EI ++ K +     +LLGQL+WRE ++++A    +F +M GN  C +++W   +E   +LE W E RTG+P+IDA+M QL+NEG+IHHL RH++ACFLTRGDL++ WEEG KVFE++LLD D+ LN+ NWMWLS SAFF  Y+RVYSPVAFGKK DKDG +IR YLP LK  P++YIYEPWKAP  VQ KAGCIIGKDYPKPIVDH KV K NI +M + Y K++ G +   S
Sbjct:    9 IHWFRKGLRLHDNPALLAACENASDVKA----IFILDPWFTTNAKVGVNRWRFLLQTLRNLDQNLQKYNSRLYIIRGNPVDVFPKLFKQWEITHLTFEVDIEPYAKERDAEIKSLAEKLGVEVITCVSHTLYNTAYVVDANGGSAPLTYERLRNVVNKFAGPPTPVDVPKEIKTA--------TNDSHDQEYGIPSMSDLGHDEAECGPVLFPGGETEGLKRLESMLKKTNW--VCKFEKPKTEPNTLSP-STTVLSPYLKFGCVSARTFYYKLQEIYKKNKTHTQPPVSLLGQLLWREFYYVVASATPNFDKMAGNKFCTKVDWDENRE---YLEAWKEGRTGYPFIDAIMIQLKNEGWIHHLARHAVACFLTRGDLFLHWEEGMKVFEEWLLDADWCLNAGNWMWLSASAFFFQYFRVYSPVAFGKKTDKDGNYIRKYLPQLKNYPTQYIYEPWKAPLTVQVKAGCIIGKDYPKPIVDHDKVRKINIGRMAEAYKKRQKGTVNDKS 498          
BLAST of Gvermi8140.t1 vs. uniprot
Match: UPI0014872650 (cryptochrome circadian regulator 5 isoform X2 n=1 Tax=Cyclopterus lumpus TaxID=8103 RepID=UPI0014872650)

HSP 1 Score: 434 bits (1117), Expect = 2.570e-144
Identity = 229/498 (45.98%), Postives = 317/498 (63.65%), Query Frame = 0
Query:   15 LHWFRRDLRLADNLALNAAVRLAREKETPLIPLYVVDPALEPEKC-SVARMRFLRESVCSLQSNLLEHGLHLRVVVGHANKVLPELAQRWSAKNVFWEREYAPQPRRRDDSISSELKSLDIQVHTFDGFLLYDPDQLLRHCDGCAPRNMNGMLNLVDSVGDPEKPKNFADGKTVSFEKDPYFTGDKDENMMSFPSLVDLGYEDVENKWTVFRGGEDEGLKRMDDFLRLKNGRTAADFSKPKTSPATFSTRETTVLSPYFALGCVSCRSFYARLREIEQRYKLNEMRQTTLLGQLIWREHFWLLAYTIEHFHQMRGNSVCRQINWRNEKESSKFLECWAEARTGFPWIDALMTQLRNEGFIHHLGRHSLACFLTRGDLWVSWEEGFKVFEKYLLDYDYALNSANWMWLSCSAFFVMYYRVYSPVAFGKKWDKDGEFIRHYLPVLKKMPSKYIYEPWKAPEAVQKKAGCIIGKDYPKPIVDHAKVSKENIEKMKKEYAKK 511
            +HWFR+ LRL DN AL AA+R  +E    L P++++DP L  + C  + R RFL  ++  L  +L +    L VV G   +V PEL  +W    + +E +  P    RD ++++  K   ++V       LYD D+++   +G AP   N M  +V ++G P+KP      + +   K P    +  E     P+L +LG++        F GGE E L+R+D+   +K       F KP+TSP + S   TTVLSPY   GC+S R+F+ RL E+ Q  K ++    +L GQL+WRE F+  +  I +F++M GN VC Q++W    E   +L  W EARTGFP+IDA+MTQLR EG+IHHL RH++ACFLTRGDLW+SWEEG KVFE+ LLD D+ALN+ NW WLS SAFF  ++RVYSPVAFGKK DK+G++I+ YLP+LKK+P++YIYEPWKAP +VQ+ AGCI+GKDYP PI  H  +SK+NI++MK  YAKK
Sbjct:    6 VHWFRKGLRLHDNPALMAALRDCQE----LYPVFILDPHLHNDTCVGINRWRFLVGALRDLDCSLRKLNSRLFVVRGKPEEVFPELFDKWKVTKLTYEYDTEPYSLSRDQTVTTLAKEHRVEVLYKISHTLYDIDRMIEENNGKAPLTYNRMRAIVKTLGPPKKPIPAPTMEDMKDVKTP--CSENHEQKYEMPTLGELGHDTAALGEEQFPGGEQESLRRLDE--HMKRTGWVCGFEKPQTSPNSLSP-STTVLSPYVTFGCLSARTFWWRLAEVYQGKKHSDP-PVSLHGQLLWREFFYTASVGIPNFNKMEGNPVCTQVDWDTNPE---YLAAWREARTGFPFIDAIMTQLRQEGWIHHLARHAVACFLTRGDLWISWEEGQKVFEELLLDGDWALNAGNWQWLSASAFFHQFFRVYSPVAFGKKTDKNGDYIKKYLPLLKKLPAEYIYEPWKAPRSVQQAAGCIVGKDYPHPIAQHEVISKKNIQRMKLAYAKK 490          
BLAST of Gvermi8140.t1 vs. uniprot
Match: UPI0018D85196 (cryptochrome-2-like n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D85196)

HSP 1 Score: 436 bits (1121), Expect = 4.270e-144
Identity = 226/498 (45.38%), Postives = 316/498 (63.45%), Query Frame = 0
Query:   15 LHWFRRDLRLADNLALNAAVRLAREKETPLIPLYVVDPA-LEPEKCSVARMRFLRESVCSLQSNLLEHGLHLRVVVGHANKVLPELAQRWSAKNVFWEREYAPQPRRRDDSISSELKSLDIQVHTFDGFLLYDPDQLLRHCDGCAPRNMNGMLNLVDSVGDPEKPKNFADGKTVSFEKDPYFTGDKDENMMSFPSLVDLGYEDVENKWTVFRGGEDEGLKRMDDFLRLKNGRTAADFSKPKTSPATFSTRETTVLSPYFALGCVSCRSFYARLREIEQRYKLNEMRQTTLLGQLIWREHFWLLAYTIEHFHQMRGNSVCRQINWRNEKESSKFLECWAEARTGFPWIDALMTQLRNEGFIHHLGRHSLACFLTRGDLWVSWEEGFKVFEKYLLDYDYALNSANWMWLSCSAFFVMYYRVYSPVAFGKKWDKDGEFIRHYLPVLKKMPSKYIYEPWKAPEAVQKKAGCIIGKDYPKPIVDHAKVSKENIEKMKKEYAKK 511
            LHWFR+ LRL DN +L AAVR ++E       ++++DP  ++     + R RFL +S+  L   L   G  L V+ G   +V P++ ++W   ++ +E +  P   +RD+++ +  +   +Q+       LYD   + R   G  P     +L++V  +  P KP      + +   K P  T D D +    PSL +LG +  +    +F GGE E ++RM++ L  +       F KPKT P T S   TTVLSPY   GC+S R FY +++++  R K +     +L GQL+WRE F+ +A T  +FH+M GN VC Q+ W   +E   +L+ W EARTG+P+IDA+MTQL+ EG+IHHL RH++ACFLTRGDLW+SWEEG KVFE++LLD DY+LN+ NWMWLS SAFF  Y+RVYSP+ FGKK DK+G++IR YLPVLKKMPS+YIYEPW AP  VQ+KAGCI+G DYP+PIV+H+ V K NIE+MKK  A+K
Sbjct:   41 LHWFRKGLRLHDNPSLLAAVRDSQEFRA----VFILDPMFVKSGTVGINRWRFLLQSLQDLDDGLKGLGSRLYVLRGKPTEVFPDIFKKWKISHLTFELDTEPYATQRDEAVEAIAEKHGVQITKKSSHTLYDIQSITRANGGKTPMTYQSLLSIVSKMAAPRKPDPALSKEDLQDCKLPV-TSDHD-SQYGVPSLEELGLDPKDAGPVLFPGGETEAVRRMEEHLERQEW--VCRFEKPKTEPNTLSP-STTVLSPYLKFGCLSPRLFYHKIQDVYTRKKNHSKPPVSLHGQLLWREFFYTVAATTPNFHKMEGNPVCLQVPWDTNQE---YLQAWKEARTGYPFIDAIMTQLKQEGWIHHLARHAVACFLTRGDLWISWEEGQKVFEEWLLDADYSLNAGNWMWLSASAFFHQYFRVYSPIVFGKKTDKNGDYIRKYLPVLKKMPSQYIYEPWTAPRTVQEKAGCIVGTDYPRPIVEHSVVMKRNIERMKKARAEK 526          
BLAST of Gvermi8140.t1 vs. uniprot
Match: A0A7S3CBL2_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chloropicon roscoffensis TaxID=1461544 RepID=A0A7S3CBL2_9CHLO)

HSP 1 Score: 433 bits (1114), Expect = 6.190e-144
Identity = 230/500 (46.00%), Postives = 307/500 (61.40%), Query Frame = 0
Query:   15 LHWFRRDLRLADNLALNAAVRLAREKETPLIPLYVVDPALEPEKCSVA----RMRFLRESVCSLQSNLLEHGLHLRVVVGHANKVLPELAQRWSAKNVFWEREYAPQPRRRDDSISSELKSLDIQVHTFDGFLLYDPDQLLRHCDGCAPRNMNGMLNLVDSVGDPEKPKNFADGKTVSFEKDPYFTGDKDENMMSFPSLVDLGYEDVEN-KWTVFRGGEDEGLKRMDDFLRLKNGRTAADFSKPKTSPATFSTRETTVLSPYFALGCVSCRSFYARLREIEQRYKLNEMRQTTLLGQLIWREHFWLLAYTIEHFHQMRGNSVCRQINWRNEKESSKFLECWAEARTGFPWIDALMTQLRNEGFIHHLGRHSLACFLTRGDLWVSWEEGFKVFEKYLLDYDYALNSANWMWLSCSAFFVMYYRVYSPVAFGKKWDKDGEFIRHYLPVLKKMPSKYIYEPWKAPEAVQKKAGCIIGKDYPKPIVDHAKVSKENIEKMKKEYA 509
            L WFR+ LR+ DN AL  A + A      + P++V+DP+++P +  V     R +FL ES+  L  +L   G HL  + G    VLP L +      + +E +  P  + + + +++  K +   VH      L+DP+ L+  C   AP++    L LV   G P  P + A     +  +D            S P+L DLGYE  E    T F GGE EGL+R++D  + ++ R  A F KPKTSP  F    TTVLSPY   GCVS R FY +L++  +R   +     +LLGQL WRE F+L  Y   +F +M GN +CRQI W   +E  + L  WA A+TG+PWIDA MTQLR +G++HHL RH++ACFLTRGDLWVSWEEG KVF++ L+D D++LN+ANWMWLSCS+FF  Y+R YSPVAFG+K+D  G++IR +LPVLK  P ++IYEPWKAP AVQKKAGCI+G DYPKPIVDHA+  K N  KM   YA
Sbjct:   20 LVWFRKGLRVHDNPALLEASKSAEA----VYPVFVLDPSIDPTENGVRVGANRAQFLLESLEDLDQSLQGLGSHLLCLQGRPEDVLPPLMKELDITRLSFEFDTEPYWKDQGEKVAASAKQMGASVHCPTSHTLFDPEHLMAKCMMDAPKSYGQFLKLVAKCGKPPAPLD-APSSLPAVPEDVL-----SRRYRSVPTLEDLGYERPEEIDRTPFPGGESEGLRRLED--QFQDIRRIAMFEKPKTSPTDFVVPSTTVLSPYLKHGCVSSRVFYYKLKDAYKRNGRHADPPVSLLGQLYWREFFYLCGYAFPNFGRMEGNPICRQIPWDRSEEGKERLRKWANAQTGYPWIDAAMTQLRQQGWLHHLARHAVACFLTRGDLWVSWEEGRKVFDELLIDADWSLNNANWMWLSCSSFFYQYFRCYSPVAFGRKYDPQGKYIRKFLPVLKHFPKEFIYEPWKAPIAVQKKAGCIVGVDYPKPIVDHAEAVKANKSKMAAAYA 507          
The following BLAST results are available for this feature:
BLAST of Gvermi8140.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IW64_9FLOR2.910e-27466.48(6-4)DNA photolyase n=1 Tax=Gracilariopsis chorda ... [more]
R7QKC4_CHOCR5.410e-22256.83Cryptochrome/photolyase n=1 Tax=Chondrus crispus T... [more]
A0A7S1ETW7_9RHOD2.100e-15245.58Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
UPI0009E5366C1.980e-14747.98cryptochrome-1-like n=2 Tax=Orbicella faveolata Ta... [more]
H2MAP7_ORYLA3.330e-14745.83Cryptochrome-1 n=10 Tax=Oryzias TaxID=8089 RepID=H... [more]
UPI00144599057.380e-14544.76cryptochrome circadian regulator 5 n=1 Tax=Epineph... [more]
A0A6N0A1H0_BATAZ1.190e-14445.286-4 photolyase (Fragment) n=1 Tax=Bathymodiolus az... [more]
UPI00148726502.570e-14445.98cryptochrome circadian regulator 5 isoform X2 n=1 ... [more]
UPI0018D851964.270e-14445.38cryptochrome-2-like n=1 Tax=Patiria miniata TaxID=... [more]
A0A7S3CBL2_9CHLO6.190e-14446.00Hypothetical protein (Fragment) n=1 Tax=Chloropico... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014729Rossmann-like alpha/beta/alpha sandwich foldGENE3D3.40.50.620HUPscoord: 15..226
e-value: 8.9E-74
score: 250.9
IPR006050DNA photolyase, N-terminalPFAMPF00875DNA_photolyasecoord: 14..159
e-value: 2.7E-38
score: 131.5
IPR006050DNA photolyase, N-terminalPROSITEPS51645PHR_CRY_ALPHA_BETAcoord: 12..144
score: 37.372643
NoneNo IPR availableGENE3D1.10.579.10DNA Cyclobutane Dipyrimidine Photolyase, subunit A, domain 3coord: 321..546
e-value: 3.7E-86
score: 290.0
NoneNo IPR availableGENE3D1.25.40.80coord: 142..313
e-value: 8.9E-74
score: 250.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 517..547
NoneNo IPR availablePANTHERPTHR11455:SF9(6-4)-PHOTOLYASE, ISOFORM Acoord: 14..512
NoneNo IPR availableCDDcd00293USP_Likecoord: 29..105
e-value: 0.00798902
score: 35.0382
IPR005101Cryptochrome/DNA photolyase, FAD-binding domainPFAMPF03441FAD_binding_7coord: 304..506
e-value: 4.7E-77
score: 258.1
IPR002081Cryptochrome/DNA photolyase class 1PANTHERPTHR11455CRYPTOCHROMEcoord: 14..512
IPR036155Cryptochrome/photolyase, N-terminal domain superfamilySUPERFAMILY52425Cryptochrome/photolyase, N-terminal domaincoord: 13..157
IPR036134Cryptochrome/DNA photolyase, FAD-binding domain-like superfamilySUPERFAMILY48173Cryptochrome/photolyase FAD-binding domaincoord: 216..507

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24226contigScGOVlb_24226:1212996..1214639 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi8140.t1Gvermi8140.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24226 1212996..1214639 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi8140.t1 ID=Gvermi8140.t1|Name=Gvermi8140.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=548bp
MKNAISFATVSGSVLHWFRRDLRLADNLALNAAVRLAREKETPLIPLYVV
DPALEPEKCSVARMRFLRESVCSLQSNLLEHGLHLRVVVGHANKVLPELA
QRWSAKNVFWEREYAPQPRRRDDSISSELKSLDIQVHTFDGFLLYDPDQL
LRHCDGCAPRNMNGMLNLVDSVGDPEKPKNFADGKTVSFEKDPYFTGDKD
ENMMSFPSLVDLGYEDVENKWTVFRGGEDEGLKRMDDFLRLKNGRTAADF
SKPKTSPATFSTRETTVLSPYFALGCVSCRSFYARLREIEQRYKLNEMRQ
TTLLGQLIWREHFWLLAYTIEHFHQMRGNSVCRQINWRNEKESSKFLECW
AEARTGFPWIDALMTQLRNEGFIHHLGRHSLACFLTRGDLWVSWEEGFKV
FEKYLLDYDYALNSANWMWLSCSAFFVMYYRVYSPVAFGKKWDKDGEFIR
HYLPVLKKMPSKYIYEPWKAPEAVQKKAGCIIGKDYPKPIVDHAKVSKEN
IEKMKKEYAKKEFGKLEQVSGEPLKNENDGPNSEGSVDSPRKKRRRL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014729Rossmann-like_a/b/a_fold
IPR006050DNA_photolyase_N
IPR005101Cryptochr/Photolyase_FAD-bd
IPR002081Cryptochrome/DNA_photolyase_1
IPR036155Crypto/Photolyase_N_sf
IPR036134Crypto/Photolyase_FAD-like_sf