Gvermi8046.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi8046.t1
Unique NameGvermi8046.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length507
Homology
BLAST of Gvermi8046.t1 vs. uniprot
Match: A0A2V3INI7_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3INI7_9FLOR)

HSP 1 Score: 258 bits (658), Expect = 2.930e-76
Identity = 151/499 (30.26%), Postives = 261/499 (52.30%), Query Frame = 0
Query:    1 MAIELDFPLPIFNVLKYLIIFTFLDIFVRNNINFLVCAFRGFCLGNGHRVPLSDLPIDRFNFFSLGQFKLSIYSVFLCAVVLFTYAVELSLEFSTGSIAKTVSVPEIMKMRNASLDSCAILSLAGSQYILLMSRFAAECVVFPEDEIDNISDRRYKIYGSTWINELNATSPRCPRTDSNLIAEGTQIYGSRNIHEDRTTISRDIISFSDGEKVGARQNVIILRVDRSDLRSISVSEESSETYATGQLLIRFQNSSITCRGDVHGRYGEKFMKVELYFCQGFSLTTEGEKDLLLLSGSALLGIDAENMNSKWHVLVATSLGREIRSFSKDVVGFSESQSDSAFATFLAVSSNRDDQSLQKFAAMYRHCGNIRLPHANDEWHEQLVTHASGQIVSRITVEYWAIGLVMCWPVLLFILRIFVSFRCKSKNMPMNLFGEQDIGNLWYKAMNRNDAFQTYEKHEQNSRKTASCFTRCKTSLPANK---VFLILERQENNDFITI 496
            M I  +  LP+F+VLKY+I+F+F+D+ VR  IN L    R + + NG  VP+     DRF+  S    KLS  S+ +  + LFTYA+EL LEFST S    +S PE+++++  +  +C +  +        MS+    CVV+ E+      D+ Y +Y   W+ E    + RC +TD N +A    +Y + N+   ++    ++   S G      + +I +    +D+ + +   +    + TG L+++  N++I+C G+VHGR G+  MK EL+FC      +  + D + + GSAL+  DA++MN+ W V +A S GREI+ F K +V     + + A+  FL +++N+D  S+Q++A +Y++C  I++P  N  W  +L   A      R+ V+ WAI L++ WP+ L IL        + + +P  + GE +I   WY  + R       ++  +  ++  +C T C+      K   +FL ++     D +T+
Sbjct:    1 MVILSNISLPVFSVLKYIIVFSFIDVLVRVCINNLNTFCRKYSISNGRSVPIGGTAFDRFSVSSHSFPKLSFLSMIVVLISLFTYAIELILEFSTDSFVVNISKPEVLEVQVENHGTCTLGEVTDVLAAEYMSQVGNNCVVYSEE------DQMYTLYAPLWVREGGRIALRCIQTDDNELAREAALYANENLARVQSDFVDEMRKHSYGANGDKNRYLITITARSTDVLAAAKRTQRDGNFVTGPLVVKIPNTAISCIGNVHGRIGDGQMKAELHFCLNGGWPSNDQTDFIYMLGSALIPEDAKSMNADWEVKIAISHGREIKDFGKGIVSGGLFRYE-AYGAFLGLTTNQDVHSIQRYAIVYKYCDVIKIPGRNSIWERRLEPKAKSVSSVRVQVKDWAIILIVSWPLFLCILVGLTQLYSRGRELPQMVSGEDNIAMQWYSDLRRRRKRFHDDEETETGKRPETCVT-CRPFFCKKKSKDLFLSVDPGPFEDRVTV 491          
BLAST of Gvermi8046.t1 vs. uniprot
Match: A0A2V3IIK5_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IIK5_9FLOR)

HSP 1 Score: 176 bits (447), Expect = 7.570e-46
Identity = 143/507 (28.21%), Postives = 229/507 (45.17%), Query Frame = 0
Query:    1 MAIELDFPLPIFNVLKYLIIFTFLDIFVRNNINFLVCAFRGFCLGNGHRVPLSDLPIDRFNFFSLGQFKLSIYSVFLCAVVLFTYAVELSLEFSTGSIAKTVSVPEIMKMRNASLDSCAILSLAGSQYILLMSRFAAECVVFPEDEIDNISDRRYKIYGSTWINELNAT-SPRCPRTDSNLIAEGTQIY---------GSRNIHEDRTTISRDIISFSDGEKVGARQNVIILRVDRSDLRSISVSEESSETYATGQLLI-RFQNSSITCRGDVHGRYGEKFMKVELYFC-QGFSLTTEGEKDLLLLSGSALLGIDAENMNSKWHVLVATSLGREIRSFSKDVVGFSESQSDSAFATFLAVSSNRDDQSLQKFAAMYRHCGNIRLPHANDEWHEQLVTHASGQIVSRITVEYWAIGLVMCWPVLLFILRIFVSFRCKSKNMPMNLFGEQDIGNLWYKAMNRNDAFQTYEKHEQNSRKTASCFTRCKTSLPANKVFLILERQENNDFIT 495
            M +    P+P+FNVLKYL+I    D  VRN ++      R      G+ V      IDR+N      F+    S+FL  + L  Y VE+SLEF+T S A    +   ++  N +   C++ ++   +     +R A ECVV        + +  Y++Y   WI     T  P C  T  NL+ E  ++Y           R I E   T+S      S+G+   A++ VI +R+   D+    V E++          I R   + + C G V GR+GE  M++ +  C  GF   TE    +    G+ L+ ID E+++ +W  ++A    R +  F++ VV      +  AFA FLA S  +D  ++ K+A  YR+C  + +P  N E   + V  ++ ++ +  TV+ WAI  ++CW V++   RI +      + MP  LFGEQ I  LW                E+  R+   C  +C+      + +L +E     D IT
Sbjct:    1 MELHTSLPVPVFNVLKYLLIALATDGVVRNGLDSFEHFRRRLSFYRGYSVQFETTRIDRYNVLHRISFR-DFLSLFLLFITLAAYGVEISLEFATDSRAVRFRIAGNVRRLNFTRGVCSLDTILYQENANRFARLAEECVV--------LENGMYRLYRPIWIISPEKTPQPLCEPTSENLLYESKEVYHALEGKGEQAKREIKELLRTMSLHSYK-SNGD---AKRAVISMRITSKDVVGKFVHEDADALPIISAAFIKRLSKTGVKCFGTVRGRHGEGMMRLAMLACTNGF---TENST-MSYAEGTGLVEIDVEDIDKEWSTIIAVDNRRSLYQFARKVVRERLENNAVAFAVFLAESRAQDKINVNKYAIAYRNCRKLSVPSRNPESWIENVPISNSELRTTATVKLWAIVTLVCWLVVVTAARILLHAVANHRGMPNRLFGEQQIVCLWV---------------EEKDRENHDCIEKCR------RAYLSVETGYFKDHIT 469          
BLAST of Gvermi8046.t1 vs. uniprot
Match: A0A2V3J4Y5_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4Y5_9FLOR)

HSP 1 Score: 77.8 bits (190), Expect = 1.450e-13
Identity = 35/106 (33.02%), Postives = 67/106 (63.21%), Query Frame = 0
Query:  345 FLAVSSNRDDQSLQKFAAMYRHCGNIRLP--HANDEWHEQLVTHASGQIVSRITVEYWAIGLVMCWPVLLFILRIFVSFRCKSKNMPMNLFGEQDIGNLWYKAMNR 448
            FL    NRDD+SL+++A +Y+ C  I++P    +  W +++V  A+   + +I V+ WA+ L++ WP++L ++ +FV +R K +N+  +++GE+ I   WY  + R
Sbjct:   27 FLGTVDNRDDESLKRYAVVYKECNRIKVPTRFGSRTW-QKMVPKANTITMIQIKVKIWALSLLLSWPIVLQLMVMFVGWRIKGRNLRHHVYGEEQIAKHWYSEVQR 131          
The following BLAST results are available for this feature:
BLAST of Gvermi8046.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3INI7_9FLOR2.930e-7630.26Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IIK5_9FLOR7.570e-4628.21Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J4Y5_9FLOR1.450e-1333.02Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 420..506
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..69
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 132..398
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 112..131
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 92..111
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 399..419
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 70..91
NoneNo IPR availableTMHMMTMhelixcoord: 70..87
NoneNo IPR availableTMHMMTMhelixcoord: 10..32
NoneNo IPR availableTMHMMTMhelixcoord: 399..421

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24226contigScGOVlb_24226:860175..861695 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi8046.t1Gvermi8046.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24226 860175..861695 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi8046.t1 ID=Gvermi8046.t1|Name=Gvermi8046.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=507bp
MAIELDFPLPIFNVLKYLIIFTFLDIFVRNNINFLVCAFRGFCLGNGHRV
PLSDLPIDRFNFFSLGQFKLSIYSVFLCAVVLFTYAVELSLEFSTGSIAK
TVSVPEIMKMRNASLDSCAILSLAGSQYILLMSRFAAECVVFPEDEIDNI
SDRRYKIYGSTWINELNATSPRCPRTDSNLIAEGTQIYGSRNIHEDRTTI
SRDIISFSDGEKVGARQNVIILRVDRSDLRSISVSEESSETYATGQLLIR
FQNSSITCRGDVHGRYGEKFMKVELYFCQGFSLTTEGEKDLLLLSGSALL
GIDAENMNSKWHVLVATSLGREIRSFSKDVVGFSESQSDSAFATFLAVSS
NRDDQSLQKFAAMYRHCGNIRLPHANDEWHEQLVTHASGQIVSRITVEYW
AIGLVMCWPVLLFILRIFVSFRCKSKNMPMNLFGEQDIGNLWYKAMNRND
AFQTYEKHEQNSRKTASCFTRCKTSLPANKVFLILERQENNDFITIMGTD
CITGGS*
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