Gvermi8036.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi8036.t1
Unique NameGvermi8036.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length194
Homology
BLAST of Gvermi8036.t1 vs. uniprot
Match: A0A2V3IHF8_9FLOR (Eukaryotic translation initiation factor 4E n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHF8_9FLOR)

HSP 1 Score: 298 bits (763), Expect = 6.250e-101
Identity = 140/195 (71.79%), Postives = 161/195 (82.56%), Query Frame = 0
Query:    1 MADEHAQADDAPHPLQFKWTLWHDFVTTRNRSAAYAANLRPIASFDTVEDFWAVFNSLKEPSQLPPQHTYNLFKFGIDPKWEDPQNVDGGEWRVTF-PNSHMPDLDKCWINTILTVIGEGFGPQESDDIAGIVMNRKRGINRVAIWTKSASQEDLQTRIGHRWRETSGITSDLPYLLFKDSI-SSKKPKPRYFID 193
            MA+E  Q +   HPLQFKWTLWHDF + R R+A+YAANLRPIASFDTVE+FWA+FNSLKEPS L   HTYNLFKFGI+PKWED QN DGGEWRVTF P+ H P L+ CWINT+LTVIGEGFGP+ESDDIAG+VMNRKRG NRVAIWTK+A+ E LQ  IG RWRETSGI +D  YL FKD I ++K+PKP Y ++
Sbjct:    1 MAEEQTQNESVSHPLQFKWTLWHDFPSPRTRNASYAANLRPIASFDTVEEFWAIFNSLKEPSHLQSLHTYNLFKFGIEPKWEDAQNKDGGEWRVTFTPSQHSP-LNDCWINTVLTVIGEGFGPEESDDIAGVVMNRKRGNNRVAIWTKTAADEKLQRSIGTRWRETSGIIADQHYLRFKDLIGTNKRPKPHYTVE 194          
BLAST of Gvermi8036.t1 vs. uniprot
Match: Q7XZA0_GRIJA (Eukaryotic translation initiation factor p28 subunit (Fragment) n=1 Tax=Griffithsia japonica TaxID=83288 RepID=Q7XZA0_GRIJA)

HSP 1 Score: 253 bits (647), Expect = 3.260e-83
Identity = 125/189 (66.14%), Postives = 146/189 (77.25%), Query Frame = 0
Query:   12 PHPLQFKWTLWHD-FVTTRNRSAAYAANLRPIASFDTVEDFWAVFNSLKEPSQLPPQHTYNLFKFGIDPKWEDPQNVDGGEWRVTFPNSHMPDLDKCWINTILTVIGEGFGPQESDDIAGIVMNRKRGINRVAIWTKSASQEDLQTRIGHRWRETSGI-TSDLPYLLFKDSI------SSKKPKPRYFI 192
            PHPLQFKWTLWHD FV  +    AYAANLR +ASFDTVEDFWA+FN+LKEPSQL P +TYNLFK GI+PKWEDP N  GGEWRV+ P++    LD+ WINT+LTVIGEGFGP ESDDIAGIV+N KRG +R+AIWTK+A  E LQ RIG RWRET+ I T  + Y +FKDS+      S+KK + RY I
Sbjct:   13 PHPLQFKWTLWHDVFVKGKG---AYAANLREVASFDTVEDFWALFNNLKEPSQLKPGNTYNLFKAGIEPKWEDPHNDAGGEWRVSLPSTRREVLDEYWINTVLTVIGEGFGPDESDDIAGIVLNIKRGNDRIAIWTKTALNEQLQDRIGKRWRETANIVTIRMEYTVFKDSLMATSKNSNKKARVRYLI 198          
BLAST of Gvermi8036.t1 vs. uniprot
Match: R7QP45_CHOCR (Translation initiation factor eIF4, subunit E, type 1 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QP45_CHOCR)

HSP 1 Score: 251 bits (642), Expect = 1.590e-82
Identity = 116/182 (63.74%), Postives = 145/182 (79.67%), Query Frame = 0
Query:   13 HPLQFKWTLWHDFVTTRNRSAAYAANLRPIASFDTVEDFWAVFNSLKEPSQLPPQHTYNLFKFGIDPKWEDPQNVDGGEWRVTFPNSHMPDLDKCWINTILTVIGEGFGPQESDDIAGIVMNRKRGINRVAIWTKSASQEDLQTRIGHRWRETSGITSDLPYLLFKDSIS-SKKPKPRYFID 193
            HPLQFKWTLWHD V   NRS+ Y ANLR +ASFDTVEDFWAVFN+L EPS+LP  +TYNLFK+GI+PKWED QN +GGEWR+  PNS+   LDK W+NT+LTV+GEGFGP+ESDDI+GIV+N K G +R+AIWTKSA   DLQ RIG RW++T  IT ++ Y+ FKD++  +++   RY I+
Sbjct:   16 HPLQFKWTLWHDIV---NRSS-YGANLREVASFDTVEDFWAVFNNLMEPSRLPRNNTYNLFKYGIEPKWEDKQNTNGGEWRLPLPNSYKDQLDKYWLNTLLTVLGEGFGPEESDDISGIVLNIKSGKDRLAIWTKSALSADLQMRIGQRWKKTVSITHEIEYISFKDAMGGARRGSSRYRIE 193          
BLAST of Gvermi8036.t1 vs. uniprot
Match: A0A1X6NJV7_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NJV7_PORUM)

HSP 1 Score: 186 bits (471), Expect = 2.400e-56
Identity = 91/190 (47.89%), Postives = 129/190 (67.89%), Query Frame = 0
Query:   13 HPLQFKWTLWHD--FVTTRNRSAAYAANLRPIASFDTVEDFWAVFNSLKEPSQLPPQHTYNLFKFGIDPKWEDPQNVDGGEWRVTFPNSHMPDLDKCWINTILTVIGEGFGPQESDDIAGIVMNRKRGINRVAIWTKSASQEDLQTRIGHRWRETS---GITSD--LPYLLFKDSI---SSKKPKPRYFI 192
            HPLQ++WTLW+D      +NR A++  NL  + +F TVE+FWA+FN++ EPS L P   Y+LFK GI PKWED  N +GG+W +  P S+   LD+ WI+T+LTVIGEGF    SDDIAG+V++ +R  +R+++WTK+++ E +Q RIG  WR T+   G+  +  L YL+ KDSI   SS K K R+ +
Sbjct:   19 HPLQYRWTLWYDNSAAARKNRFASWDENLTKLMTFGTVEEFWALFNNILEPSHLAPSSNYHLFKEGIAPKWEDAANSEGGKWVLMNPPSYKERLDQYWIHTVLTVIGEGFEAPLSDDIAGLVLSTRRQADRISMWTKTSADEPMQKRIGEAWRATATPNGLHDNVQLEYLIHKDSIAKNSSYKNKARFVV 208          
BLAST of Gvermi8036.t1 vs. uniprot
Match: A0A2V0PB31_9CHLO (mRNA cap-binding protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PB31_9CHLO)

HSP 1 Score: 166 bits (419), Expect = 1.620e-48
Identity = 74/184 (40.22%), Postives = 113/184 (61.41%), Query Frame = 0
Query:   13 HPLQFKWTLWHDFVTTRNRSAAYAANLRPIASFDTVEDFWAVFNSLKEPSQLPPQHTYNLFKFGIDPKWEDPQNVDGGEWRVTFPNSHMPD--LDKCWINTILTVIGEGFGPQESDDIAGIVMNRKRGINRVAIWTKSASQEDLQTRIGHRWRETSGITSD--LPYLLFKDSISSKKPKPRYFI 192
            HPL+++WTLW D    +     +   LRP+ SFD VEDFW ++N++K PSQL P  TY LFK GI PKWEDP+N +GG W  T P +  P   LD  W++ +L  IGE F  +E D++ G+ +N + G NR+ +WTK+A+ E LQ  +G + ++   ++ +  + + +F D +   K + RY +
Sbjct:   24 HPLEYRWTLWFDNPAQKQSMNKFGQGLRPVYSFDNVEDFWCLYNNIKAPSQLQPSATYYLFKDGIQPKWEDPKNANGGCWTATVPRAANPGQLLDAWWLHLVLACIGEQF--EEGDEVCGVTVNIRNGKNRIEMWTKTAANEALQISVGKQLKQLLDMSDNTKIGFSVFADKLQQGKARDRYSV 205          
BLAST of Gvermi8036.t1 vs. uniprot
Match: A0A059B2I6_EUCGR (mRNA cap-binding protein n=5 Tax=Myrtoideae TaxID=1699513 RepID=A0A059B2I6_EUCGR)

HSP 1 Score: 164 bits (415), Expect = 5.780e-48
Identity = 76/185 (41.08%), Postives = 116/185 (62.70%), Query Frame = 0
Query:    6 AQADDAPHPLQFKWTLWHDFVTTRNRSAAYAANLRPIASFDTVEDFWAVFNSLKEPSQLPPQHTYNLFKFGIDPKWEDPQNVDGGEWRVTFPNSHMPDLDKCWINTILTVIGEGFGPQESDDIAGIVMNRKRGINRVAIWTKSASQEDLQTRIGHRWRETSGITSDLPYLLFKDSISSKKPKPRY 190
            A A   PH L+ KWT W D  +   + AA+  +LR + +FDTVE+FW + + + +PS+LP    ++LFK G++PKWEDP+  +GG+W VT  +S    LD  W+ T++ +IGE F   E+DDI G+V + ++  +++A+WTK+AS E LQT IG +W+E   +T  + Y    DS   K  + RY
Sbjct:   19 AAAAKQPHKLERKWTFWFDNQSKPKQGAAWGTSLRKVYTFDTVEEFWCLHDQIFKPSKLPANADFHLFKAGVEPKWEDPECANGGKWTVT--SSRKATLDAMWLETMMGLIGEQF--DEADDICGVVASVRQRGDKLALWTKTASNEALQTGIGRKWKEIMDVTDKITYSFHDDSRREKSVRGRY 199          
BLAST of Gvermi8036.t1 vs. uniprot
Match: A0A6J1CB61_MOMCH (mRNA cap-binding protein n=9 Tax=Cucurbitaceae TaxID=3650 RepID=A0A6J1CB61_MOMCH)

HSP 1 Score: 162 bits (410), Expect = 3.200e-47
Identity = 73/189 (38.62%), Postives = 119/189 (62.96%), Query Frame = 0
Query:    2 ADEHAQADDAPHPLQFKWTLWHDFVTTRNRSAAYAANLRPIASFDTVEDFWAVFNSLKEPSQLPPQHTYNLFKFGIDPKWEDPQNVDGGEWRVTFPNSHMPDLDKCWINTILTVIGEGFGPQESDDIAGIVMNRKRGINRVAIWTKSASQEDLQTRIGHRWRETSGITSDLPYLLFKDSISSKKPKPRY 190
            A E A ++   H L+ KWT W D  +   + AA+  +LR + +FDTVE+FW +++ + +PS+LP    ++LFK G++PKWEDP+  +GG+W VT  +S   +LD  W+ T++ +IGE F  +ESD+I G+V + ++  +++A+WTK+A+ E  Q  IG +W+E   +T  + Y   +D    K  K RY
Sbjct:   14 AAEVADSNQQSHRLERKWTFWFDNQSRPKQGAAWGTSLRKVYTFDTVEEFWCLYDQIFKPSKLPANADFHLFKSGVEPKWEDPECANGGKWTVT--SSRKANLDNMWLETLMALIGEQF--EESDEICGVVASVRQRQDKLALWTKTATNEAAQMSIGRKWKEIIDVTDKITYSFHEDLRREKSAKSRY 198          
BLAST of Gvermi8036.t1 vs. uniprot
Match: A0A6P8DTP5_PUNGR (mRNA cap-binding protein n=3 Tax=Punica granatum TaxID=22663 RepID=A0A6P8DTP5_PUNGR)

HSP 1 Score: 162 bits (409), Expect = 4.140e-47
Identity = 72/181 (39.78%), Postives = 114/181 (62.98%), Query Frame = 0
Query:   12 PHPLQFKWTLWHDFVTTRNRSAAYAANLRPIASFDTVEDFWAVFNSLKEPSQLPPQHTYNLFKFGIDPKWEDPQNVDGGEWRVTFPNSHMPDLDKCWINTILTVIGEGFGPQESDDIAGIVMNRKRGINRVAIWTKSASQEDLQTRIGHRWRETSGITSDLPYLLFKDSISSKKPKPRYFI 192
            PH L+ KWT W D  +   + AA+  +LR + +FDTVE+FW +++ + +PS+LPP   ++LFK G++PKWEDP+   GG+W VT  ++    LD  W  T+L +IGE F   E+D+I G+V + ++  +++A+WTK+A+ E +Q  IG +W+E   +T  + Y    DS   +  K RY I
Sbjct:   21 PHRLERKWTFWFDVQSKPKQGAAWGTSLRKVYTFDTVEEFWCLYDQIFQPSRLPPNADFHLFKAGVEPKWEDPECASGGKWTVT--SNRKSQLDLMWRETLLALIGEQF--DEADEICGVVASVRQRQDKLALWTKTAANEAVQMSIGRKWKEILDVTDKINYSFHDDSRRERSAKGRYSI 197          
BLAST of Gvermi8036.t1 vs. uniprot
Match: A0A830CRU5_9LAMI (mRNA cap-binding protein n=1 Tax=Phtheirospermum japonicum TaxID=374723 RepID=A0A830CRU5_9LAMI)

HSP 1 Score: 161 bits (407), Expect = 1.020e-46
Identity = 71/191 (37.17%), Postives = 119/191 (62.30%), Query Frame = 0
Query:    2 ADEHAQADDAPHPLQFKWTLWHDFVTTRNRSAAYAANLRPIASFDTVEDFWAVFNSLKEPSQLPPQHTYNLFKFGIDPKWEDPQNVDGGEWRVTFPNSHMPDLDKCWINTILTVIGEGFGPQESDDIAGIVMNRKRGINRVAIWTKSASQEDLQTRIGHRWRETSGITSDLPYLLFKDSISSKKPKPRYFI 192
            A+  A  +  PH LQ KWT W+D  +   + AA+  +LR + +FDTVE+FW +++ +  PS+ P    ++LF+ G++PKWEDP+  +GG+W VT  +S   +LD+ W+ T++ +IGE F   E+D+I G+V + ++  ++V++WTK+A+ E  Q  IG +W+E   +T  + Y    DS   +  K RY +
Sbjct:   18 AEAPATLEKQPHNLQRKWTFWYDNQSKPKQGAAWGTSLRQVYTFDTVEEFWCLYDQIFRPSKFPANADFHLFRSGVEPKWEDPECANGGKWTVT--SSKKTNLDEMWLETLMALIGEQF--DEADEICGVVASVRQRQDKVSLWTKNAANEAAQMGIGRKWKEIIDVTDKISYNFHDDSKRERSAKSRYSV 204          
BLAST of Gvermi8036.t1 vs. uniprot
Match: A0A1U8AQF7_NELNU (mRNA cap-binding protein n=1 Tax=Nelumbo nucifera TaxID=4432 RepID=A0A1U8AQF7_NELNU)

HSP 1 Score: 160 bits (405), Expect = 1.480e-46
Identity = 73/178 (41.01%), Postives = 112/178 (62.92%), Query Frame = 0
Query:   13 HPLQFKWTLWHDFVTTRNRSAAYAANLRPIASFDTVEDFWAVFNSLKEPSQLPPQHTYNLFKFGIDPKWEDPQNVDGGEWRVTFPNSHMPDLDKCWINTILTVIGEGFGPQESDDIAGIVMNRKRGINRVAIWTKSASQEDLQTRIGHRWRETSGITSDLPYLLFKDSISSKKPKPRY 190
            H L+ KWT W D  +   + AA+  +LR I +FDTVE+FW +++ +  PS+ P    ++LFK GI+PKWEDP+  +GG+W VT  +S   +LD  W+ T++ +IGE F   ESDDI G+V + ++  +++A+WTK+A+ E LQ  IG +W+E   +T  + Y    DS   K  + RY
Sbjct:   18 HRLERKWTFWFDNQSKPKQGAAWGTSLRKIYTFDTVEEFWCLYDQIFRPSKFPANADFHLFKSGIEPKWEDPECANGGKWSVT--SSRKANLDNMWLETLMALIGEQF--DESDDICGVVASVRQRQDKLALWTKTATNEALQMSIGRKWKEIIDVTDKITYSFHDDSRRDKSIRGRY 191          
The following BLAST results are available for this feature:
BLAST of Gvermi8036.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IHF8_9FLOR6.250e-10171.79Eukaryotic translation initiation factor 4E n=1 Ta... [more]
Q7XZA0_GRIJA3.260e-8366.14Eukaryotic translation initiation factor p28 subun... [more]
R7QP45_CHOCR1.590e-8263.74Translation initiation factor eIF4, subunit E, typ... [more]
A0A1X6NJV7_PORUM2.400e-5647.89Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A2V0PB31_9CHLO1.620e-4840.22mRNA cap-binding protein n=1 Tax=Raphidocelis subc... [more]
A0A059B2I6_EUCGR5.780e-4841.08mRNA cap-binding protein n=5 Tax=Myrtoideae TaxID=... [more]
A0A6J1CB61_MOMCH3.200e-4738.62mRNA cap-binding protein n=9 Tax=Cucurbitaceae Tax... [more]
A0A6P8DTP5_PUNGR4.140e-4739.78mRNA cap-binding protein n=3 Tax=Punica granatum T... [more]
A0A830CRU5_9LAMI1.020e-4637.17mRNA cap-binding protein n=1 Tax=Phtheirospermum j... [more]
A0A1U8AQF7_NELNU1.480e-4641.01mRNA cap-binding protein n=1 Tax=Nelumbo nucifera ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001040Translation Initiation factor eIF- 4ePFAMPF01652IF4Ecoord: 14..169
e-value: 2.1E-45
score: 154.4
IPR001040Translation Initiation factor eIF- 4ePANTHERPTHR11960EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATEDcoord: 5..163
IPR023398Translation Initiation factor eIF- 4e-likeGENE3D3.30.760.10RNA Cap, Translation Initiation Factor Eif4ecoord: 1..188
e-value: 2.0E-54
score: 186.1
IPR023398Translation Initiation factor eIF- 4e-likeSUPERFAMILY55418eIF4e-likecoord: 11..185

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24226contigScGOVlb_24226:774974..775691 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi8036.t1Gvermi8036.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24226 774974..775691 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi8036.t1 ID=Gvermi8036.t1|Name=Gvermi8036.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=194bp
MADEHAQADDAPHPLQFKWTLWHDFVTTRNRSAAYAANLRPIASFDTVED
FWAVFNSLKEPSQLPPQHTYNLFKFGIDPKWEDPQNVDGGEWRVTFPNSH
MPDLDKCWINTILTVIGEGFGPQESDDIAGIVMNRKRGINRVAIWTKSAS
QEDLQTRIGHRWRETSGITSDLPYLLFKDSISSKKPKPRYFID*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001040TIF_eIF_4E
IPR023398TIF_eIF4e-like