Gvermi8018.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gvermi8018.t1
Unique Name	Gvermi8018.t1
Type	polypeptide
Organism	Gracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length	179

Homology

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BLAST of Gvermi8018.t1 vs. uniprot
Match: A0A2V3IHG7_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHG7_9FLOR)

HSP 1 Score: 166 bits (421), Expect = 4.700e-49
Identity = 93/182 (51.10%), Postives = 116/182 (63.74%), Query Frame = 0

Query:    1 LSEYPADFLDEVRRIVRAPWFISRVRERIEWPHLRFSGVLFGREATAQ----CGDGXXXXXXXXXXXXXXXXXXVPESLRQLACRADMKLIDVPPLVVQRAAASTKRTLPRPHARIVAVFETYGHSRRVLLELQNRRAQFEIDLQKQRQAWSDRGDIRRNETNIMHLHGSDPFDEHYLDYYL 178
            L ++P  FLDE+RR+VR+P FIS VRERI WP+ RFSGVLF R +        GDG                  VP S R LA R DM L+DVPPL+VQRAA ++K  L    ARIVA+FETYGH+R+ L   QN+ A+ E +LQKQR AWSD G+  R ET IM+  G + F++ YL+YYL
Sbjct:   42 LEDHPTTFLDELRRLVRSPHFISSVRERINWPYFRFSGVLFARTSLENEEQSDGDG------------------VPFSFRDLAKRVDMVLVDVPPLLVQRAARNSKHVLDAQRARIVAIFETYGHTRKGLATSQNQHAEIENELQKQRLAWSDHGNNLRTETRIMNPRGVELFEDDYLNYYL 205

The following BLAST results are available for this feature:

BLAST of Gvermi8018.t1 vs. uniprot

BLAST of Gvermi8018.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IHG7_9FLOR	4.700e-49	51.10	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 126..146
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 50..73
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 54..68

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
ScGOVlb_24226	contig	ScGOVlb_24226:672064..672679 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gvermi8018.t1	Gvermi8018.t1	Gracilaria vermiculophylla HapMaleFtJ_2017 male	mRNA	ScGOVlb_24226 672064..672679 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gvermi8018.t1 ID=Gvermi8018.t1|Name=Gvermi8018.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=179bp
LSEYPADFLDEVRRIVRAPWFISRVRERIEWPHLRFSGVLFGREATAQCG
DGDVDGEGDGDDDGDGDGDGVPESLRQLACRADMKLIDVPPLVVQRAAAS
TKRTLPRPHARIVAVFETYGHSRRVLLELQNRRAQFEIDLQKQRQAWSDR
GDIRRNETNIMHLHGSDPFDEHYLDYYL*