Gvermi7993.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi7993.t1
Unique NameGvermi7993.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length613
Homology
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BLAST of Gvermi7993.t1 vs. uniprot
Match: A0A2V3IQ57_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQ57_9FLOR)

HSP 1 Score: 853 bits (2203), Expect = 1.380e-306
Identity = 410/595 (68.91%), Postives = 475/595 (79.83%), Query Frame = 0 
Query:   21 TALPKPDVPWRDLAVFKYDFRISDEFSGNRLDLSKWDPHGKRNPDTQCPNWNGPPSSSQPQWSTFFPTTTDPDGG-PAERFYEVANGRLRLRTDSKPLEYFQKREYYCDATTFKCNHNDQIDCFSTDYNGVPFYKDAEKTQYAGVTHDKCKIEPYCIPHPQFVTGKPRVYSRMVGAHLTSKRSFKYGFFEAEVQLGDNPAVAAVWMHDDQMVNGYCRYVQNSDPNSDRDRLLECPSAIRSRRWQEIDMLEAMNSAIHQQLYIPNIHAFAGYKGEFTSENAVDKGDGNMGGGPILVKKSVFNENNPSFSDVSQAEQLANDWHFSSGSVHTLDAPWSAKRRRIGLYWSPKEIRFLIDGVEVQRMRNTIIHQPMLFDLSYSYNVQWARETPSSEQVARPFEIMYVRRWDVYTADGLDPPSDLPLNEKMSGFGNYYGEQLLGMFQRFPANDDKTFSEVFDEQDTIQNIRDSILSSASSSSDKLAPVQRAAFNLHTGERDYVLGARSVNETMFTVRQGQRFKRAGGVGNARFSRARDKLTAAQRRIALSYKSRSAAVAN--GRAARLQDPETTVFEFANPQKNGAGWATRDGLGTDGSLA 612
            TA  +P+VPWR  A FKYD  +SDEFS   LD SKWDPHGKRNPDT CPNWNGPPS+SQP+WSTFFPTTTDPD   P E+ Y V NG+L L    +PLEYF KREYYC+ TTFKCNH++ IDCF+T+YNGVPFYKDA KT YAGVTHDKCKIEP+CIPHP++VTGKPRVYSR+VGAHLTSK  FKYGFFE  VQ+G++P+VAAVWMHDDQMVNGYCR++ N+DP+   DR+LECPS IRSRRWQEIDMLEAMNSA H+QLYIPNIHAFAGYKGEFTSE A D GDGNMGGGPILVK S+FNE  PSF DV  A++ +NDWHFSSGSVH L+A WS + R++G+YWSPKEIRF +DG EV+R+RNT+IHQPML DLSYS+NVQWARET +++++  PF I YVRRWDVYT DGLDPPS LP +EKM+ FGN+YGE LLGMF+RFP NDDKTFSEV  E+DT        LS  SS       +Q        G+ DY+L    VN ++F+VRQG+R +RAGGVGN RFS+AR KL+A +R +ALSY SR A V     RA  + D ETTVFEFANP  NGAGWAT DGLGTDGSL+
Sbjct:   20 TAAIRPNVPWRSSATFKYDRVVSDEFSLRVLDTSKWDPHGKRNPDTNCPNWNGPPSTSQPEWSTFFPTTTDPDTLLPTEKLYSVRNGKLTLYNGVRPLEYFTKREYYCNTTTFKCNHDNTIDCFATNYNGVPFYKDAAKTMYAGVTHDKCKIEPFCIPHPEYVTGKPRVYSRIVGAHLTSKTPFKYGFFEVAVQIGNSPSVAAVWMHDDQMVNGYCRFITNTDPSRSGDRVLECPSLIRSRRWQEIDMLEAMNSAFHKQLYIPNIHAFAGYKGEFTSEIAQDSGDGNMGGGPILVKSSLFNEPKPSFGDVPAADRKSNDWHFSSGSVHKLNAAWSDRPRKLGMYWSPKEIRFYVDGKEVRRIRNTLIHQPMLMDLSYSFNVQWARETATTQRIEEPFHIYYVRRWDVYTDDGLDPPSSLPFDEKMTTFGNHYGEDLLGMFERFPTNDDKTFSEVLPEEDT--------LSGPSSR------MQTGVAEFDLGDTDYMLSELQVNRSVFSVRQGRRQRRAGGVGNRRFSKARRKLSAQERLVALSYASRFAGVRRLGERAEVVPDAETTVFEFANPNANGAGWATTDGLGTDGSLS 600
The following BLAST results are available for this feature:
BLAST of Gvermi7993.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IQ57_9FLOR1.380e-30668.91Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.60.120.200coord: 33..427
e-value: 2.7E-27
score: 98.0
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..612
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
IPR013320Concanavalin A-like lectin/glucanase domain superfamilySUPERFAMILY49899Concanavalin A-like lectins/glucanasescoord: 34..425

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24226contigScGOVlb_24226:540259..542097 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi7993.t1Gvermi7993.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24226 540259..542097 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi7993.t1 ID=Gvermi7993.t1|Name=Gvermi7993.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=613bp
MSFLLRAVIVAVIALSASVSTALPKPDVPWRDLAVFKYDFRISDEFSGNR
LDLSKWDPHGKRNPDTQCPNWNGPPSSSQPQWSTFFPTTTDPDGGPAERF
YEVANGRLRLRTDSKPLEYFQKREYYCDATTFKCNHNDQIDCFSTDYNGV
PFYKDAEKTQYAGVTHDKCKIEPYCIPHPQFVTGKPRVYSRMVGAHLTSK
RSFKYGFFEAEVQLGDNPAVAAVWMHDDQMVNGYCRYVQNSDPNSDRDRL
LECPSAIRSRRWQEIDMLEAMNSAIHQQLYIPNIHAFAGYKGEFTSENAV
DKGDGNMGGGPILVKKSVFNENNPSFSDVSQAEQLANDWHFSSGSVHTLD
APWSAKRRRIGLYWSPKEIRFLIDGVEVQRMRNTIIHQPMLFDLSYSYNV
QWARETPSSEQVARPFEIMYVRRWDVYTADGLDPPSDLPLNEKMSGFGNY
YGEQLLGMFQRFPANDDKTFSEVFDEQDTIQNIRDSILSSASSSSDKLAP
VQRAAFNLHTGERDYVLGARSVNETMFTVRQGQRFKRAGGVGNARFSRAR
DKLTAAQRRIALSYKSRSAAVANGRAARLQDPETTVFEFANPQKNGAGWA
TRDGLGTDGSLA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013320ConA-like_dom_sf