Gvermi7703.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male
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Overview
Homology
BLAST of Gvermi7703.t1 vs. uniprot
Match: A0A2V3ID60_9FLOR (Cartilage matrix protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ID60_9FLOR) HSP 1 Score: 127 bits (320), Expect = 6.170e-33 Identity = 72/189 (38.10%), Postives = 105/189 (55.56%), Query Frame = 0
Query: 36 VRNEVRNSQCAVNVCFAIDGSGSVSDSEFGLQKDFVLDVASILS-GIRNASFSAVQYGAQRYPISAQTEDHEQFLRAVQNTLFRKDGRTVIAGGIEYCFFELLLAPRGVAKIVMIGDGRHNHGPDPLESVKKFRQFFGPQGSLSWVNIGFGDVQFSSEMAAAGGGEVFEIHDYVDLSIVIDELVYDICG 223
VR V + C +NVCFA+DGS SV+ ++ +QKDFV ++++L + N+SFSAVQYG Q PIS T+ + F V + + I GI YC +LL KI++ GDGR D + F+ F P G LS V +GF + +A AGGG +FEI +Y+D ++ +L ++CG
Sbjct: 35 VRRMVERNGCNLNVCFALDGSASVTPLDYEMQKDFVQLMSAVLDFEVENSSFSAVQYGDQVSPISPLTQSIDDFNLKVHASNISAFQGSSIGKGITYCSNQLLELADNPVKIIVFGDGRETSKTDAVSIAASFKDFH-PNGRLSTVGVGFPNTVLLKTIAEAGGGRLFEIDEYIDALDLVVDLFLEVCG 222
BLAST of Gvermi7703.t1 vs. uniprot
Match: A0A2V3IQR5_9FLOR (Collagen alpha-5(VI) chain n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQR5_9FLOR) HSP 1 Score: 109 bits (273), Expect = 9.800e-26 Identity = 70/184 (38.04%), Postives = 102/184 (55.43%), Query Frame = 0
Query: 44 QCAVNVCFAIDGSGSVSDSEFGLQKDFVLDVASILSGIRNASFSAVQYGAQRYPISAQTEDHEQFLRAVQNTLFRKDGRTVIAGGIEYCFFELLLAPRGVAKIVMIGDGRHNHGPD--PLESVKKFRQFFG-PQGSLSWVNIGFGDVQFSSEMAAAGGGE-VFEIHDYVDLSIVIDELVYDICG 223
+C N+CFA+DGSGS+ +EF L+KDF VA++++ A F+AVQYG + IS TED + FL AV T RT IA G+ C + IV++GDGR N PL+ V + F P ++S V +GF D + AGG E VF + +++++ V+ ELV ++CG
Sbjct: 56 RCDPNICFAVDGSGSMDVTEFQLEKDFTNLVAAVVAYDEQARFAAVQYGLRPKFISRLTEDADAFLEAVHYTESLNAPRTFIAPGLAGCIRQFYYLKGEPKHIVLLGDGRSNFDSKLPPLDPVSIAQAFLANPNNTISAVGVGF-DADDTMLTNIAGGEENVFNVGQWLEVTTVLAELVGEVCG 238
BLAST of Gvermi7703.t1 vs. uniprot
Match: R7Q5C2_CHOCR (VWFA domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q5C2_CHOCR) HSP 1 Score: 105 bits (263), Expect = 4.070e-24 Identity = 70/210 (33.33%), Postives = 112/210 (53.33%), Query Frame = 0
Query: 18 NVLTASATVHSTDSAPTTVRNEVRNSQCAVNVCFAIDGSGSVSDSEFGLQKDFVLDVASILSGIRNASFSAVQYGAQRYPISAQTEDHEQFLRAVQNTLFRKDGRTVIAGGIEYCFFELLLAPR-GVAKIVMIGDGRHNHGPDPLESVKKFRQFFGPQGSLSWVNIGFGDVQFSSEMAAAGGGE---VFEIHDYVDLSIVIDELVYDICG 223
N + AS + DS T V R+ C +++CFA+DGSGS+S E+ +QKD V +A IL+ NA+FSAVQYG IS T D F++ V N++ + RT + G+ +C ++ P+ G K+V++GDGR N+ L V K + S+ +G G+ + ++ GG+ V+ +Y D+ V+ +LV +C
Sbjct: 54 NPVAASLGAKTIDSLQTEV---CRDGSCDISLCFALDGSGSISAEEYQVQKDLVKLIA-ILAAPANATFSAVQYGLANEFISVSTSDPFAFMKYVDNSVLLRAPRTFLTAGLGFCISQVNENPKAGGKKVVVLGDGRDNYMESSLALVLKSAE------SVDIFAVGIGNSLDTQKLLEITGGQKNHVYTASNYADVGQVVVDLVRALCS 253
BLAST of Gvermi7703.t1 vs. uniprot
Match: A0A2V3ISA4_9FLOR (VWFA domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISA4_9FLOR) HSP 1 Score: 98.6 bits (244), Expect = 1.610e-21 Identity = 62/188 (32.98%), Postives = 94/188 (50.00%), Query Frame = 0
Query: 40 VRNSQCAVNVCFAIDGSGSVSDSEFGLQKDFVLDVASILSGIRNASFSAVQYGAQRYPISAQTEDHEQFLRAVQNTLFRKDGRTVIAGGIEYCFFELLLAPRGVAKIVMIGDGRHNHGP--DPLESVKKFRQFFG-PQGSLSWVNIGFGDVQFSSEMAAAGGGEVFEIHDYVDLSIVIDELVYDICGS 224
V + C N+CFAIDGS S++D EF LQ DFV + ++S + +SA+QYG + +S T+D FL V+ T + RT IA GI C + KI+++GDGR PL+ QF P S+ V + F + E+ VF + D++ + V+ +LV +CG+
Sbjct: 49 VEETGCEPNLCFAIDGSSSITDDEFQLQLDFVALITGLVSLDEQSGYSAIQYGLRPKFMSRFTQDAAAFLLKVEGTRQLRSVRTFIAPGIGGCMRQFRRVRGQANKIILLGDGRSTFDSRDPPLDPPSIAAQFLAEPNNSICAVGVSFDTTELLEEITG-DPDRVFSVADWMSVVDVLADLVEQVCGA 235
BLAST of Gvermi7703.t1 vs. uniprot
Match: R7Q3A9_CHOCR (VWFA domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q3A9_CHOCR) HSP 1 Score: 91.3 bits (225), Expect = 1.030e-18 Identity = 60/183 (32.79%), Postives = 94/183 (51.37%), Query Frame = 0
Query: 41 RNSQCAVNVCFAIDGSGSVSDSEFGLQKDFVLDVASILSGIRNASFSAVQYGAQRYPISAQTEDHEQFLRAVQNTLFRKDGRTVIAGGIEYCFFELLLAPRGVAK-IVMIGDGRHNHGPDPLESVKKFRQFFGPQGSLSWVNIGFGDVQFSSEMAAAGGGEVFEIHDYVDLSIVIDELVYDIC 222
R +C + +CFA+DGSGS+S +F +Q+D V +AS+ A+FSAVQYG IS T + +F RAV +++F++ RT I G+ +C L PRG + I+++GDGR N L V +S V IGF + + ++ Y D+ ++ +LV +C
Sbjct: 61 RGRRCNMRLCFALDGSGSISPVQFKVQQDLVKLLASVARE-GGATFSAVQYGLSNTAISTPTGNAPKFRRAVDDSIFQRAPRTFIGSGLGFCISNLKTEPRGRGRRILLLGDGRSNFFTLALPLVLSTLNDI----QISAVGIGFPRNSRTLLDITGSRSRLCAVNRYSDIRRIVFKLVRGLC 238
BLAST of Gvermi7703.t1 vs. uniprot
Match: A0A7S1XDR4_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XDR4_9RHOD) HSP 1 Score: 65.5 bits (158), Expect = 5.100e-9 Identity = 51/164 (31.10%), Postives = 75/164 (45.73%), Query Frame = 0
Query: 45 CAVN-VCFAIDGSGSVSDSEFGLQKDFVLDVASILSGIRN-----ASFSAVQYGAQRYPISAQTEDHEQFLRAVQNTLFRKDGRTVIAGGIEYCFFELLLAPRGVAKIVMIGDGRHNHGPDPLESVKKFRQFFGPQGSLSWVNIGFGDVQFSSEMAAAGGGEVF 202
C +N +CFAID SGS+SDS F + + VL VA L I ++A+ +GA +S+ T D F + V N RKD T+ A E C LL GV IV++ DG + + + + P + V +G + S + A G + F
Sbjct: 33 CTINNICFAIDESGSISDSAFVDETNVVLQVARALDMISKMQGIQTKYAAIDFGASESTVSSLT-DVASFEQRVSNNPHRKDPDTLYAPAFERCG-SLLSGASGVRAIVLVTDGAPSDTTAAIVAANALKSM--PNTFIITVGVGLTSSRASFLQSLASGPDFF 192
BLAST of Gvermi7703.t1 vs. uniprot
Match: UPI0016046404 (cartilage matrix protein-like n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=UPI0016046404) HSP 1 Score: 57.4 bits (137), Expect = 4.000e-6 Identity = 49/203 (24.14%), Postives = 91/203 (44.83%), Query Frame = 0
Query: 38 NEVRNSQCA---VNVCFAIDGSGSVSDSEFGLQKDFVLDVASILSGIRNASFSAVQYGAQRYPISAQTEDHEQFLRAVQNTLFRKDGRTVIAGG------IEYCFFELLLAPRGVAK-----IVMIGDGR-HNHGPDPLESVKKFRQFFGPQGSLSWVNIGFGDVQFSSEMAAAGGGE-VFEIHDYVDLSIVIDELVYDICGS 224
N NS+C V++ F++DGSGSV+++ F KDF D ++ S + + GA +Y + +TE + DG + GG + Y +L A G +V++ DGR ++ P E ++ R + +G G +++S +A AG E V+ + + +++ + + D+CG+
Sbjct: 30 NTTNNSECRDTNVDIVFSLDGSGSVTETNFQRVKDFAKD---LIQEFNINSQNGTRVGAVQYSSTIRTEFKLNRYNTSAEVMSAIDGIRYLRGGTYTGAALRYLSDNILTAAAGDRPDRANIVVLVTDGRSYDSVVTPAEDLRSKR--------VQLYAVGVGKAEYASLLAIAGDPEYVYRVGSFANITSLTSAVQEDLCGN 221 The following BLAST results are available for this feature:
BLAST of Gvermi7703.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 7
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gvermi7703.t1 ID=Gvermi7703.t1|Name=Gvermi7703.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=228bpback to top |