Gvermi7092.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi7092.t1
Unique NameGvermi7092.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length126
Homology
BLAST of Gvermi7092.t1 vs. uniprot
Match: A0A2V3INK7_9FLOR (Nuclear transcription factor Y subunit B-1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3INK7_9FLOR)

HSP 1 Score: 236 bits (603), Expect = 9.110e-79
Identity = 115/118 (97.46%), Postives = 118/118 (100.00%), Query Frame = 0
Query:    1 MAETQNEEPDQGVREQDRFLPTANIARIMKKALPGNAKVAKDGKDTVQECVSEFVSFITSEASDKCQREKRKTINGDDILWAMSTLGFDKYIDPLKHYLARFRETVMQEKGEDTKNTE 118
            MAETQNEEPDQGVREQDRFLPTANIARIMKKALPGNAKVAKDGKDTVQECVSEFVSFITSEASDKCQREKRKTINGDDILWAMSTLGFDKYI+PLKHYLAR+RETVMQEKGEDTKNT+
Sbjct:    1 MAETQNEEPDQGVREQDRFLPTANIARIMKKALPGNAKVAKDGKDTVQECVSEFVSFITSEASDKCQREKRKTINGDDILWAMSTLGFDKYIEPLKHYLARYRETVMQEKGEDTKNTD 118          
BLAST of Gvermi7092.t1 vs. uniprot
Match: A0A1X6NML2_PORUM (CBFD_NFYB_HMF domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NML2_PORUM)

HSP 1 Score: 187 bits (474), Expect = 4.670e-59
Identity = 93/112 (83.04%), Postives = 102/112 (91.07%), Query Frame = 0
Query:    8 EPDQGVREQDRFLPTANIARIMKKALPGNAKVAKDGKDTVQECVSEFVSFITSEASDKCQREKRKTINGDDILWAMSTLGFDKYIDPLKHYLARFRETVMQEKGEDT-KNTE 118
            E D  VRE D++LPTANIARIMKKALP +AKVAKDGKDT+QECVSEFVSFITSEASDKCQREKRKTINGDDILWAMSTLGFDKYI+PLK YL+R+RET+ QEK E+  KNTE
Sbjct:   13 EEDGSVRELDKYLPTANIARIMKKALPSSAKVAKDGKDTIQECVSEFVSFITSEASDKCQREKRKTINGDDILWAMSTLGFDKYIEPLKVYLSRYRETMSQEKEEEAAKNTE 124          
BLAST of Gvermi7092.t1 vs. uniprot
Match: M2VTX7_GALSU (Nuclear transcription factor Y, beta n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2VTX7_GALSU)

HSP 1 Score: 181 bits (459), Expect = 1.370e-56
Identity = 86/106 (81.13%), Postives = 97/106 (91.51%), Query Frame = 0
Query:   14 REQDRFLPTANIARIMKKALPGNAKVAKDGKDTVQECVSEFVSFITSEASDKCQREKRKTINGDDILWAMSTLGFDKYIDPLKHYLARFRETVMQEKGEDTKNTEA 119
            REQ++FLPTANIARIMKKALP NAK+AKDGKDTVQECVSEFVSFITSEASDKCQREKRKTINGDDILWAM+TLGFD Y++PLK YLAR+RE +  EKGE+ ++  A
Sbjct:   26 REQEKFLPTANIARIMKKALPPNAKIAKDGKDTVQECVSEFVSFITSEASDKCQREKRKTINGDDILWAMNTLGFDNYVEPLKIYLARYREAMSAEKGEEGRSRRA 131          
BLAST of Gvermi7092.t1 vs. uniprot
Match: A0A7S0ZJ35_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZJ35_9RHOD)

HSP 1 Score: 177 bits (449), Expect = 2.490e-55
Identity = 84/102 (82.35%), Postives = 95/102 (93.14%), Query Frame = 0
Query:   14 REQDRFLPTANIARIMKKALPGNAKVAKDGKDTVQECVSEFVSFITSEASDKCQREKRKTINGDDILWAMSTLGFDKYIDPLKHYLARFRETVMQEKGEDTK 115
            REQD++LPTANIARIMK+ALP NAKVAKDGKDTVQECVSEFVSFITSEASDKC REKRKTING+DI+WAM+TLGFDKYI+PLK YL R+RE ++ EKGE+ K
Sbjct:   13 REQDKYLPTANIARIMKQALPDNAKVAKDGKDTVQECVSEFVSFITSEASDKCIREKRKTINGEDIIWAMTTLGFDKYIEPLKIYLTRYREIMVNEKGEEEK 114          
BLAST of Gvermi7092.t1 vs. uniprot
Match: A0A2R6R7Z6_ACTCC (Nuclear transcription factor Y subunit B-10 like n=1 Tax=Actinidia chinensis var. chinensis TaxID=1590841 RepID=A0A2R6R7Z6_ACTCC)

HSP 1 Score: 174 bits (441), Expect = 5.140e-54
Identity = 81/104 (77.88%), Postives = 93/104 (89.42%), Query Frame = 0
Query:    3 ETQNEEPDQGVREQDRFLPTANIARIMKKALPGNAKVAKDGKDTVQECVSEFVSFITSEASDKCQREKRKTINGDDILWAMSTLGFDKYIDPLKHYLARFRETV 106
            E+ ++ P  GVREQDRFLP ANI+RIMKKALP N K+AKD K+TVQECVSEF+SF+TSEASDKCQREKRKTINGDD+LWAM+TLGF+ YIDPLK YLAR+RE V
Sbjct:   15 ESGDQSPRSGVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFVTSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKVYLARYREVV 118          
BLAST of Gvermi7092.t1 vs. uniprot
Match: A0A6T6NW26_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A6T6NW26_9RHOD)

HSP 1 Score: 171 bits (434), Expect = 4.360e-53
Identity = 80/100 (80.00%), Postives = 91/100 (91.00%), Query Frame = 0
Query:   14 REQDRFLPTANIARIMKKALPGNAKVAKDGKDTVQECVSEFVSFITSEASDKCQREKRKTINGDDILWAMSTLGFDKYIDPLKHYLARFRETVMQEKGED 113
            REQDRFLP ANIARIMK ALP NAK+AKDGK+TVQECVSEFVSFITSEASDKCQREKRKTINGDD+LWAM+TLGF+ Y++PLK YL R+R+TV  EK ++
Sbjct:   15 REQDRFLPIANIARIMKHALPQNAKIAKDGKETVQECVSEFVSFITSEASDKCQREKRKTINGDDLLWAMNTLGFENYVEPLKTYLQRYRDTVKSEKDDE 114          
BLAST of Gvermi7092.t1 vs. uniprot
Match: M4C128_HYAAE (CBFD_NFYB_HMF domain-containing protein n=32 Tax=Oomycota TaxID=4762 RepID=M4C128_HYAAE)

HSP 1 Score: 171 bits (434), Expect = 5.110e-53
Identity = 80/113 (70.80%), Postives = 97/113 (85.84%), Query Frame = 0
Query:    4 TQNEEPDQGVREQDRFLPTANIARIMKKALPGNAKVAKDGKDTVQECVSEFVSFITSEASDKCQREKRKTINGDDILWAMSTLGFDKYIDPLKHYLARFRETVMQEKGEDTKN 116
            +++E  D  +REQDRFLPTANI+RIMK +LP  AK+AKDGK+TVQECVSEF+SFITSEASDKCQ+EKRKTINGDDI+WAMSTLGFD Y++PLK YL ++RE+V  EK +   N
Sbjct:    3 SKDEHNDDEIREQDRFLPTANISRIMKVSLPSTAKIAKDGKETVQECVSEFISFITSEASDKCQQEKRKTINGDDIIWAMSTLGFDSYVEPLKLYLQKYRESVKVEKNDKKDN 115          
BLAST of Gvermi7092.t1 vs. uniprot
Match: A0A6U0MLR3_MICPS (Hypothetical protein n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A6U0MLR3_MICPS)

HSP 1 Score: 172 bits (436), Expect = 1.230e-52
Identity = 82/106 (77.36%), Postives = 96/106 (90.57%), Query Frame = 0
Query:    2 AETQNEEPDQG--VREQDRFLPTANIARIMKKALPGNAKVAKDGKDTVQECVSEFVSFITSEASDKCQREKRKTINGDDILWAMSTLGFDKYIDPLKHYLARFRET 105
            AE  +E+ D+G  VREQDRFLP ANI+RIMKKALP NAK+AKD K+TVQECVSEF+SFITSEASDKCQREKRKTINGDD+LWAMSTLGF++Y++PLK YL ++RET
Sbjct:   41 AEIDDEDDDKGGNVREQDRFLPIANISRIMKKALPANAKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMSTLGFEEYVEPLKVYLHKYRET 146          
BLAST of Gvermi7092.t1 vs. uniprot
Match: UPI000C1D71AE (nuclear transcription factor Y subunit B-1-like n=1 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1D71AE)

HSP 1 Score: 172 bits (435), Expect = 1.490e-52
Identity = 81/106 (76.42%), Postives = 92/106 (86.79%), Query Frame = 0
Query:    6 NEEPDQGVREQDRFLPTANIARIMKKALPGNAKVAKDGKDTVQECVSEFVSFITSEASDKCQREKRKTINGDDILWAMSTLGFDKYIDPLKHYLARFRETVMQEKG 111
            ++ P  GVREQDRFLP ANI+RIMKKALP N K+AKD K+TVQECVSEF+SFITSEASDKCQ+EKRKTINGDD+LWAM+TLGF+ YIDPLK YLAR+RE     KG
Sbjct:   27 DQSPRSGVREQDRFLPIANISRIMKKALPANGKIAKDAKETVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIDPLKVYLARYRELEGDTKG 132          
BLAST of Gvermi7092.t1 vs. uniprot
Match: A0A6U3SNW2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A6U3SNW2_9STRA)

HSP 1 Score: 172 bits (436), Expect = 1.680e-52
Identity = 79/106 (74.53%), Postives = 96/106 (90.57%), Query Frame = 0
Query:    7 EEPDQGVREQDRFLPTANIARIMKKALPGNAKVAKDGKDTVQECVSEFVSFITSEASDKCQREKRKTINGDDILWAMSTLGFDKYIDPLKHYLARFRETVMQEKGE 112
            E PD  +REQDRFLP AN++RIMK++LP NAK+AKD K+TVQECVSEF+SFITSEASDKCQ+EKRKTINGDD+LWAM+TLGFDKY+DPLK YL+++RE++  EK E
Sbjct:   13 EGPDDEMREQDRFLPIANVSRIMKRSLPQNAKIAKDAKETVQECVSEFISFITSEASDKCQQEKRKTINGDDLLWAMNTLGFDKYMDPLKVYLSKYRESIKGEKPE 118          
The following BLAST results are available for this feature:
BLAST of Gvermi7092.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3INK7_9FLOR9.110e-7997.46Nuclear transcription factor Y subunit B-1 n=1 Tax... [more]
A0A1X6NML2_PORUM4.670e-5983.04CBFD_NFYB_HMF domain-containing protein n=1 Tax=Po... [more]
M2VTX7_GALSU1.370e-5681.13Nuclear transcription factor Y, beta n=1 Tax=Galdi... [more]
A0A7S0ZJ35_9RHOD2.490e-5582.35Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A2R6R7Z6_ACTCC5.140e-5477.88Nuclear transcription factor Y subunit B-10 like n... [more]
A0A6T6NW26_9RHOD4.360e-5380.00Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
M4C128_HYAAE5.110e-5370.80CBFD_NFYB_HMF domain-containing protein n=32 Tax=O... [more]
A0A6U0MLR3_MICPS1.230e-5277.36Hypothetical protein n=1 Tax=Micromonas pusilla Ta... [more]
UPI000C1D71AE1.490e-5276.42nuclear transcription factor Y subunit B-1-like n=... [more]
A0A6U3SNW2_9STRA1.680e-5274.53Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00615CCAATSUBUNTAcoord: 85..103
score: 34.33
coord: 47..65
score: 51.44
coord: 66..84
score: 43.9
NoneNo IPR availablePANTHERPTHR11064:SF98NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-11coord: 7..118
IPR003958Transcription factor CBF/NF-Y/archaeal histone domainPFAMPF00808CBFD_NFYB_HMFcoord: 19..83
e-value: 3.2E-26
score: 91.4
IPR009072Histone-foldGENE3D1.10.20.10Histone, subunit Acoord: 7..125
e-value: 2.9E-45
score: 155.5
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 16..120
IPR027113Transcription factor NFYB/HAP3PANTHERPTHR11064CCAAT-BINDING TRANSCRIPTION FACTOR-RELATEDcoord: 7..118

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24229contigScGOVlb_24229:1629932..1630309 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi7092.t1Gvermi7092.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24229 1629932..1630309 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi7092.t1 ID=Gvermi7092.t1|Name=Gvermi7092.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=126bp
MAETQNEEPDQGVREQDRFLPTANIARIMKKALPGNAKVAKDGKDTVQEC
VSEFVSFITSEASDKCQREKRKTINGDDILWAMSTLGFDKYIDPLKHYLA
RFRETVMQEKGEDTKNTEANKQAST*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003958CBFA_NFYB_domain
IPR009072Histone-fold
IPR027113Transc_fact_NFYB/HAP3