Gvermi6994.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male
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Overview
Homology
BLAST of Gvermi6994.t1 vs. uniprot
Match: A0A2V3J4K9_9FLOR (DNA-directed RNA polymerases I, II, and III subunit rpabc1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4K9_9FLOR) HSP 1 Score: 347 bits (889), Expect = 1.070e-119 Identity = 176/195 (90.26%), Postives = 185/195 (94.87%), Query Frame = 0
Query: 23 MLSDRGYAVLNTSEDLNLSKEDFAAQMRTANFNRESLTMLRQRRDNPADQIFVFFPDEERGKSVGVDVVSAITKRMENNAVNNALMILQTGLTPTAKGAVEKMSASGKCLLEVFMENELLVNITYHQLVPKHELMSEESKLALLRRYKLKESQLPRIQRSDPIARYYGLVPGNVVKITRPSETAGRYVTYRFCVA 217
MLSDRGYAVLNT+EDLNLSKEDF A M+TANFNRESLTMLRQRRDNPADQIFVFFPDE RGKSVGVDVVSA+TKRME+N VNN +M+LQTGLTPTAKGAVEKMSASG+CLLEVFMENELLVNIT HQLVP HEL+SE SK ALLRRYKLKESQLPRIQRSDPIARYYGLVPGNVVKITRPSETAGRYVTYR CV+
Sbjct: 1 MLSDRGYAVLNTTEDLNLSKEDFQAAMQTANFNRESLTMLRQRRDNPADQIFVFFPDEMRGKSVGVDVVSALTKRMESNGVNNGIMVLQTGLTPTAKGAVEKMSASGRCLLEVFMENELLVNITRHQLVPIHELLSEPSKHALLRRYKLKESQLPRIQRSDPIARYYGLVPGNVVKITRPSETAGRYVTYRLCVS 195
BLAST of Gvermi6994.t1 vs. uniprot
Match: R7QDZ3_CHOCR (RNA polymerase I, II, III common subunit n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QDZ3_CHOCR) HSP 1 Score: 271 bits (693), Expect = 1.580e-89 Identity = 133/216 (61.57%), Postives = 174/216 (80.56%), Query Frame = 0
Query: 1 MNDAQIEKDVSRLYRVRRTVLEMLSDRGYAVLNTSEDLNLSKEDFAAQMRTANFNRESLTMLRQRRDNPADQIFVFFPDEERGKSVGVDVVSAITKRMENNAVNNALMILQTGLTPTAKGAVEKMSASGKCLLEVFMENELLVNITYHQLVPKHELMSEESKLALLRRYKLKESQLPRIQRSDPIARYYGLVPGNVVKITRPSETAGRYVTYRFCV 216
M++ E+D+SRL+R+RRT+LEMLSDRGYAVLN+ EDL +E FA + T N+NRESLT+LRQ++D+ DQI+VFFP+E + K +GV + KRME + V +A+++L+TGLTP AK V ++++ + +E+F+ENEL+VNIT H LVPKH+++S + K ALLRRYKLKESQLPRIQ++DPIARYYGL GNVVKITRPSETAGRYVTYR CV
Sbjct: 1 MDEESTEQDISRLFRIRRTILEMLSDRGYAVLNSEEDLLQPREVFAREFITQNYNRESLTLLRQKKDDDKDQIYVFFPEEIKNKPLGVKPLLERGKRMERDGVRHAIIVLETGLTPYAKKTVAELNSGDQARMEIFIENELIVNITKHILVPKHDVLSADEKKALLRRYKLKESQLPRIQKTDPIARYYGLTHGNVVKITRPSETAGRYVTYRLCV 216
BLAST of Gvermi6994.t1 vs. uniprot
Match: A0A7S1ESI1_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1ESI1_9RHOD) HSP 1 Score: 233 bits (593), Expect = 1.890e-74 Identity = 116/213 (54.46%), Postives = 162/213 (76.06%), Query Frame = 0
Query: 4 AQIEKDVSRLYRVRRTVLEMLSDRGYAVLNTSEDLNLSKEDFAAQMRTANFNRESLTMLRQRRDNPADQIFVFFPDEERGKSVGVDVVSAITKRMENNAVNNALMILQTGLTPTAKGAVEKMSASGKCLLEVFMENELLVNITYHQLVPKHELMSEESKLALLRRYKLKESQLPRIQRSDPIARYYGLVPGNVVKITRPSETAGRYVTYRFCV 216
A ++++++R++RVRRTVL++L DRGY VL+T DL +S E F + + F E+LT+L+ +RDNP+DQI+VFFP + + +GV + +RM+ + +++A+++L +G+TP+AK AV +S+ + LE+F++NELLVNIT H LVPKHEL+S K ALL+ YKLKESQLPRIQ DP+ARYYGL PG VV+ITRPSETAGRYVTYR V
Sbjct: 2 ATMDQEITRMFRVRRTVLQLLRDRGYLVLDTDTDLGMSAEQFRERYAQSKFAAEALTILKSKRDNPSDQIYVFFPQDPK---LGVKPIREYCERMQRDGIHHAIIVLLSGMTPSAKEAVHIVSSQHR--LELFLQNELLVNITEHVLVPKHELLSPAEKRALLKMYKLKESQLPRIQMKDPVARYYGLTPGQVVRITRPSETAGRYVTYRLVV 209
BLAST of Gvermi6994.t1 vs. uniprot
Match: A0A6T6JZI1_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A6T6JZI1_9RHOD) HSP 1 Score: 229 bits (583), Expect = 6.880e-73 Identity = 117/211 (55.45%), Postives = 156/211 (73.93%), Query Frame = 0
Query: 6 IEKDVSRLYRVRRTVLEMLSDRGYAVLNTSEDLNLSKEDFAAQMRTANFNRESLTMLRQRRDNPADQIFVFFPDEERGKSVGVDVVSAITKRMENNAVNNALMILQTGLTPTAKGAVEKMSASGKCLLEVFMENELLVNITYHQLVPKHELMSEESKLALLRRYKLKESQLPRIQRSDPIARYYGLVPGNVVKITRPSETAGRYVTYRFCV 216
+++++ RL+RVR+T+ EML DRGY V+ S+DL + E+F+ + A F RESLT+L+Q+RD+PADQI+VFF G V V + RME + V+ A+MI+ GLTP+A A+ K+ + +E F+ENELLVNIT H LVPKHE++S K ALL+RYKLKESQLPR+Q+ DP++RYYGL PG+VV+ITRPSETAGRYVTYR V
Sbjct: 7 LDQEIRRLFRVRKTLHEMLVDRGYIVV--SDDLKTTLEEFSQRFHDAGFARESLTLLKQKRDDPADQIYVFFSQGTEGPKVSVKSLKDTIARMERDGVHRAIMIMSEGLTPSASDAISKLD---RYRIEPFLENELLVNITRHVLVPKHEMLSTAEKKALLKRYKLKESQLPRVQQRDPVSRYYGLSPGDVVRITRPSETAGRYVTYRLVV 212
BLAST of Gvermi6994.t1 vs. uniprot
Match: M2XGL8_GALSU (DNA-directed RNA polymerase II subunit E n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XGL8_GALSU) HSP 1 Score: 228 bits (582), Expect = 9.760e-73 Identity = 115/211 (54.50%), Postives = 161/211 (76.30%), Query Frame = 0
Query: 6 IEKDVSRLYRVRRTVLEMLSDRGYAVLNTSEDLNLSKEDFAAQMRTANFNRESLTMLRQRRDNPADQIFVFFPDEERGKSVGVDVVSAITKRMENNAVNNALMILQTGLTPTAKGAVEKMSASGKCLLEVFMENELLVNITYHQLVPKHELMSEESKLALLRRYKLKESQLPRIQRSDPIARYYGLVPGNVVKITRPSETAGRYVTYRFCV 216
+E++V++L+R+R+T+LEML DRGY VL TS DL +++E+F ++++ AN++RESLT+L+Q + +P+DQI+VFFP EER V V + RM+ V A++++ L+P AK ++K+++ K +EVF+E ELLVNIT+H+LVPKHE++S E K LL+RY LKESQLPRI +DP+ARY GL G VVKITRPSETAGRYVTYR V
Sbjct: 7 VEQEVTKLFRIRKTILEMLRDRGYVVLETSSDLEMTREEFGSRLQQANYSRESLTLLKQHQHDPSDQIYVFFPAEER---VSVKTLRDYFVRMDQERVYKAILVVIKSLSPFAKQGIQKVASQFK--VEVFLEMELLVNITHHELVPKHEVLSTEGKKQLLKRYHLKESQLPRILMTDPVARYLGLQKGQVVKITRPSETAGRYVTYRLVV 212
BLAST of Gvermi6994.t1 vs. uniprot
Match: A0A7J7IF98_9RHOD (Dna-directed RNA n=2 Tax=Cyanidiaceae TaxID=265316 RepID=A0A7J7IF98_9RHOD) HSP 1 Score: 218 bits (556), Expect = 8.320e-69 Identity = 121/214 (56.54%), Postives = 153/214 (71.50%), Query Frame = 0
Query: 3 DAQIEKDVSRLYRVRRTVLEMLSDRGYAVLNTSEDLNLSKEDFAAQMRTANFNRESLTMLRQRRDNPADQIFVFFPDEERGKSVGVDVVSAITKRMENNAVNNALMILQTGLTPTAKGAVEKMSASGKCLLEVFMENELLVNITYHQLVPKHELMSEESKLALLRRYKLKESQLPRIQRSDPIARYYGLVPGNVVKITRPSETAGRYVTYRFCV 216
D Q+E + RL+RVRRT+LEML DRGY VL T DL L E+FA + A RESLTMLRQ R + ++QI+VFFP EE+ VGV + R+E V A++++QTGLTP AK AV ++ + LE+F E ELLVNIT HQLVP+HE+++ E K LLRRY+LKE+QLPRI +SDP+ARY+G+ G V+KITR SETAGRYVTYR V
Sbjct: 4 DVQVE-ETRRLHRVRRTILEMLRDRGYLVLPTKTDLELPLEEFAHKFDAAGRARESLTMLRQHRVDRSNQIYVFFPKEEK---VGVKPIREYCMRLETENVLRAIIVVQTGLTPIAKQAVAELQP--RFHLELFQEAELLVNITKHQLVPRHEVLTAEQKKTLLRRYQLKETQLPRILQSDPVARYFGVTRGQVIKITRSSETAGRYVTYRLVV 211
BLAST of Gvermi6994.t1 vs. uniprot
Match: A0A1X6NM67_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NM67_PORUM) HSP 1 Score: 216 bits (549), Expect = 9.590e-68 Identity = 112/214 (52.34%), Postives = 152/214 (71.03%), Query Frame = 0
Query: 4 AQIEKDVSRLYRVRRTVLEMLSDRGYAVLNTS-EDLNLSKEDFAAQMRTANFNRESLTMLRQRRDNPADQIFVFFPDEERGKSVGVDVVSAITKRMENNAVNNALMILQTGLTPTAKGAVEKMSASGKCLLEVFMENELLVNITYHQLVPKHELMSEESKLALLRRYKLKESQLPRIQRSDPIARYYGLVPGNVVKITRPSETAGRYVTYRFCV 216
+ +E +V+RLYRVRRTVLEML DRGY + +TS +DL ++ +F + ++R+SLTM +Q R N +QI+VFFP R +G V +R+ N V A+++LQ +TP+A AV +M + + LE+F+ENELL+NIT H LVP+HE++S+ K ALL RYKLK+SQLPR+Q+ D +ARYYGL G V+KITRPSETAGRY TYR CV
Sbjct: 2 SSVEAEVTRLYRVRRTVLEMLRDRGYVISDTSADDLGMTAAEFENNFTASGYSRDSLTMFKQLRANAGEQIYVFFP---RDVKLGKAAVDEYKRRLTNEGVARAIIVLQGPMTPSANKAVGEMEPAVR--LELFLENELLINITKHVLVPQHEVLSDTEKAALLARYKLKDSQLPRVQKKDAVARYYGLTAGQVMKITRPSETAGRYCTYRLCV 210
BLAST of Gvermi6994.t1 vs. uniprot
Match: A0A5J4YSN5_PORPP (DNA-directed RNA polymerases II and IV subunit 5A n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YSN5_PORPP) HSP 1 Score: 210 bits (534), Expect = 1.690e-65 Identity = 105/211 (49.76%), Postives = 153/211 (72.51%), Query Frame = 0
Query: 6 IEKDVSRLYRVRRTVLEMLSDRGYAVLNTSEDLNLSKEDFAAQMRTANFNRESLTMLRQRRDNPADQIFVFFPDEERGKSVGVDVVSAITKRMENNAVNNALMILQTGLTPTAKGAVEKMSASGKCLLEVFMENELLVNITYHQLVPKHELMSEESKLALLRRYKLKESQLPRIQRSDPIARYYGLVPGNVVKITRPSETAGRYVTYRFCV 216
+++++ R++RVRRTVLEML DRGY VL+ +DL + + F R +NF ++L +++ +R + ++ VFFP +++ VGV +V + +R+E ++++ +++L LTP+AK AV MS+ + LE+F +NELLVNIT H LVPKHE+++++ K ALL YKLKESQLPRIQ DP+ARYYG+ G VVK+TRPSETAGRYVTYR V
Sbjct: 4 LQEEIKRMFRVRRTVLEMLRDRGYLVLDNEDDLGMPYQTFYNNFRESNFQDQALEIIKWKRSDVNAKVHVFFPQDQK---VGVKLVREVCERLELESIHHGIIVLLNSLTPSAKDAVSIMSSQYR--LELFAQNELLVNITQHVLVPKHEVLTDDQKRALLEMYKLKESQLPRIQTRDPVARYYGMTVGQVVKVTRPSETAGRYVTYRLVV 209
BLAST of Gvermi6994.t1 vs. uniprot
Match: V7C3Z8_PHAVU (Uncharacterized protein n=4 Tax=Phaseoleae TaxID=163735 RepID=V7C3Z8_PHAVU) HSP 1 Score: 206 bits (525), Expect = 3.670e-64 Identity = 108/210 (51.43%), Postives = 149/210 (70.95%), Query Frame = 0
Query: 7 EKDVSRLYRVRRTVLEMLSDRGYAVLNTSEDLNLSKEDFAAQMRTANFNRESLTMLRQRRDNPADQIFVFFPDEERGKSVGVDVVSAITKRMENNAVNNALMILQTGLTPTAKGAVEKMSASGKCLLEVFMENELLVNITYHQLVPKHELMSEESKLALLRRYKLKESQLPRIQRSDPIARYYGLVPGNVVKITRPSETAGRYVTYRFCV 216
++++SRLYR+R+TV+ ML DRGY V + ++N+SK +F + N RE L + + ++DN +DQI+VFFPDE + VGV + T RM N+ V A+++ QT LTP A+ V ++S+ K LEVF E ELLVNI H+LVP+H+++++ K L+ RY +KE+QLPRIQ +DP+ARYYGL G VVKI RPSETAGRYVTYRF V
Sbjct: 5 DEEISRLYRIRKTVMHMLRDRGYLVGDF--EINMSKHEFKSSHGGENMKREDLDLNKSKKDNSSDQIYVFFPDEAK---VGVKTMKTYTNRMNNDNVYRAILVTQTNLTPFARTCVSEISS--KFHLEVFQEAELLVNIKEHELVPEHQVLTDAEKKTLIERYTVKETQLPRIQVTDPVARYYGLKRGQVVKIIRPSETAGRYVTYRFVV 207
BLAST of Gvermi6994.t1 vs. uniprot
Match: A0A7S3UFC4_9CHLO (Hypothetical protein n=1 Tax=Picocystis salinarum TaxID=88271 RepID=A0A7S3UFC4_9CHLO) HSP 1 Score: 206 bits (524), Expect = 5.730e-64 Identity = 113/217 (52.07%), Postives = 153/217 (70.51%), Query Frame = 0
Query: 4 AQIEKDVSRLYRVRRTVLEMLSDRGYAVLNTSEDLNLSKEDFAAQMRTANFN----RESLTMLRQRRDNPADQIFVFFPDEERGKSVGVDVVSAITKRMENNAVNNALMILQTGLTPTAKGAVEKMSASGKCLLEVFMENELLVNITYHQLVPKHELMSEESKLALLRRYKLKESQLPRIQRSDPIARYYGLVPGNVVKITRPSETAGRYVTYRFCV 216
A D +RL+RVRRTV +ML+DRGY V ++L++++EDF Q F E LT+L R+D ++Q+FVFFP+E + VGV + +RM++ V A+++ ++ LTP AK +++M K ++E+F+E+ELLVNIT H LVPKH+L+SEE K ALL RYK+KESQLPRIQ SDP+ARYYGL G VV+I RPSETAGRYVTYR C+
Sbjct: 2 ADAPPDPTRLFRVRRTVAQMLNDRGYLV--PQKELDMTREDFV-QPPPEGFGLAPRSEDLTILVPRKDGSSEQMFVFFPEEVK---VGVKTIKTYAERMKSENVGRAILVAKSALTPFAKQCLQEMQP--KYIVELFLESELLVNITQHTLVPKHQLLSEEDKRALLSRYKVKESQLPRIQISDPVARYYGLQRGQVVRIVRPSETAGRYVTYRLCI 210 The following BLAST results are available for this feature:
BLAST of Gvermi6994.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gvermi6994.t1 ID=Gvermi6994.t1|Name=Gvermi6994.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=218bpback to top |