Gvermi6965.t2 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6965.t2
Unique NameGvermi6965.t2
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length774
Homology
BLAST of Gvermi6965.t2 vs. uniprot
Match: A0A2V3J4G4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4G4_9FLOR)

HSP 1 Score: 499 bits (1284), Expect = 5.940e-163
Identity = 326/796 (40.95%), Postives = 450/796 (56.53%), Query Frame = 0
Query:    7 EDHWFWDGKGMPDNKHDRRRVFHKSVALRHASDGRTRHFKVGDTVNMAGEGEVWVAQIIELFQVTAHDPELRHILRADSVRNESKRHYELKRCTLRWFYNYSDMIPDTLKDSRWPKRLDDEIWFSDHIEKTGYNSVQVIDGRAWLFDNLREKSEFLVNLPEEYDKERDIVRIVRGFVDSKHDHLPVRLLLDGELKWLKENPSDDPKLFHNSKRRLESIAQSSPSRKRQKN--RHSSTLRSPVNVNEDEFDPADRKSKSARRKTRSLERDRDNVGDDVSKIR-RPIRRRKITIDXXXXXXXXXXXXXESDNIPLDQLTPITHNFTPQPNLSDQPENIDLVNDEVRDLVESLNASVYEND-----AHEPQTRSPEKLVTEAPQYV---GEDEITPAPSTRVTKRKSLASRSKANTAIASRIKQTTPKPSSPSTNDHGIIVIDSDDDGQPQKPVSKATSPKLQRFHPGAASRAYRGGRHGKPSARSRSSFMPTSRERQAVSSKRQSNAGGDELQ--KSPSVVETDKVTEGKRSSKQIDAKAEDRGRLKEGKSLNVKEGLNSNSVLKTTTLSDGDDGSPVIVSNNNMEVGQKKPDAGDVIDLQRKDGKRGSLQAARKKS-----KDTASPSNRA-----------------QIAGILTDTRMEDVARLSIEGKFGKV--QEMSGAKQAGSSNVIEVNDSDAEPDDRGLQEEELSVLKPTQAQRKLTEDIYRIQSCMNDVDKNFISDKLEWLLDEIVHFHDGRKGSLDAAEYVRVLRDQLVQRRLQEIGSIREIPDFKSDP 765
            +DHWFW  KG+PD K DR+R+++KS+++++  D + R +KVGDTVNMAG  E WVAQII+LFQVT  DPELR +LR DSV+NESK HYELKRCTLRWFYN SDM  +T+K ++WPK L+ E+WFSDH+E+ G NSVQVIDGRAW+F    E+++FL + P +Y++ RD +RIVRG+VDS  DHLP+R L  GEL+WL +NPS D  L+ NSK R  +  +S           RH+ T+R PVNV+EDEF+P + K    R   +++          V+ +R RP RR KIT+D               D+IPL  L P             Q E+ID VNDEVRDLV  LNAS + ++       E    S E +V E    V    ED+ITPAP +R+ KR++++ +               PKP +     + +IV+DSDD+ +P K       PKLQRFH GAA+RAYRGGRHG+PSA++RSSFMPTS+++ +  S+++S    D LQ  K  + +        K +SK  D    DRG               S   +K   +S  D  S V  S NN+       D  + + L +  GK  S +  ++ +     +   SP  RA                   AGI  D  M++V   S +          +   KQ    N I+   SD + DD  +Q+E    L   +  +K  ++I+RI   MND+D+ FI + LEWL++E + FH G KGS++  EY R+LRD+L+ +R +EIGS+ E+P FKSDP
Sbjct:    6 DDHWFWSKKGIPDVKRDRKRIYYKSISVQNVRDNQIREYKVGDTVNMAGGEERWVAQIIDLFQVTPRDPELRQLLRTDSVKNESKHHYELKRCTLRWFYNLSDMDHNTMKKAKWPKSLEGEVWFSDHVEEDGSNSVQVIDGRAWIFATESERTKFLKDPPSDYNENRDKIRIVRGYVDSTRDHLPLRHLAPGELRWLLDNPSPDKNLYENSKLRFAARTKSPXXXXXXXXXXRHT-TIREPVNVDEDEFEPEESKPSRDREHKKAV-----RSQHHVAPLRKRPPRRMKITVDDDEETASNDRDDESRDDIPLSMLKP-----------HGQDEDIDQVNDEVRDLVHKLNASAFADEETPIPTSEIFNHSDEPVVAEPVPTVPPEDEDQITPAPVSRLKKRRAVSEK---------------PKPPASKLMQNEVIVLDSDDE-EPFKTTVPLQKPKLQRFHTGAANRAYRGGRHGRPSAKNRSSFMPTSKDQASHLSRKKS----DTLQTDKKQNFIPAIPDLRTKEASKTKDPMKVDRG---------------SKFGIKDRRVSTNDHRSTVAASRNNVVT----LDDNEGLVLDQSVGKDASSRGTKRTTNLDDARHRLSPKRRALSSSGAKPKPLRLRTTEDHAGI-EDVEMQEVVLPSPKSPRDSAVRDRVQSQKQDVGGNAIKPK-SDPDVDDAEIQKESRKALHAMKGHKKALDNIHRIYDDMNDIDQEFIWENLEWLIEESLRFHKGEKGSVNLEEYERILRDRLLAKRKEEIGSLSELPVFKSDP 743          
BLAST of Gvermi6965.t2 vs. uniprot
Match: R7Q942_CHOCR (BAH domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q942_CHOCR)

HSP 1 Score: 206 bits (523), Expect = 2.800e-54
Identity = 114/261 (43.68%), Postives = 156/261 (59.77%), Query Frame = 0
Query:   10 WFWDGKGMPDNKHDRRRVFHKSVALRHASDGRTRHFKVGDTVNMAGEGE-VWVAQIIELFQVTAHDPELRHILRADSVRNESKRHYELKRCTLRWFYNYSDMIPDTLKDSRWPKRLDDEIWFSDHIEKTGYNSVQVIDGRAWLFDNLREKSEFLVNLPEEYDKERDIVRIVRGFVDSKHDHLPVRLLLDGELKWLKENPSDDPKLFHNSKRRLESIAQSS------PSR----KRQKNRHSSTLRSPVNVNEDEFDPADRK 259
            W W        KH   RVFH+ +  R  SD   R +K+GDTV M GE +  W AQI+ELF+ T  D ELR +L+ D  +  + + YEL R TLRWFYN SDM   TL+ S  P  +  EI+FSDH+EK GYN + VI+G+AWL  +  E+ EFL N PE Y+++ D VRIVR FV+S    L VR L  GEL  L +NP+D+  LF  S++R+  +  S       PS+    K  + + S ++R P+ + +DEFDP ++K
Sbjct:    8 WEWSWTSHGQKKH-LGRVFHRKIQARRLSDDLVRTYKIGDTVVMKGENDDTWTAQIVELFEATEDDEELREVLQMDLRKINNVQGYELMRVTLRWFYNSSDMNKHTLRSSSCPNHIKHEIYFSDHVEKEGYNDITVIEGKAWLVSSKLEREEFLQNPPEGYERDMDQVRIVRCFVNSLSPDLAVRELDTGELAHLLKNPTDEKDLFETSRQRMRRLIHSDGSIIRPPSKGTGAKPPRRKRSRSIRKPIEIEDDEFDPKEKK 267          
The following BLAST results are available for this feature:
BLAST of Gvermi6965.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J4G4_9FLOR5.940e-16340.95Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q942_CHOCR2.800e-5443.68BAH domain-containing protein n=1 Tax=Chondrus cri... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR043151Bromo adjacent homology (BAH) domain superfamilyGENE3D2.30.30.490coord: 6..187
e-value: 5.7E-6
score: 27.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 300..314
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 514..543
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 213..317
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 545..579
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 250..299
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 356..618
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 392..430
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 478..505
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 583..605

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24229contigScGOVlb_24229:769980..772301 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6965.t2Gvermi6965.t2Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24229 769980..772301 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6965.t2 ID=Gvermi6965.t2|Name=Gvermi6965.t2|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=774bp
MSSNSGEDHWFWDGKGMPDNKHDRRRVFHKSVALRHASDGRTRHFKVGDT
VNMAGEGEVWVAQIIELFQVTAHDPELRHILRADSVRNESKRHYELKRCT
LRWFYNYSDMIPDTLKDSRWPKRLDDEIWFSDHIEKTGYNSVQVIDGRAW
LFDNLREKSEFLVNLPEEYDKERDIVRIVRGFVDSKHDHLPVRLLLDGEL
KWLKENPSDDPKLFHNSKRRLESIAQSSPSRKRQKNRHSSTLRSPVNVNE
DEFDPADRKSKSARRKTRSLERDRDNVGDDVSKIRRPIRRRKITIDDDDE
SASKQEDDDESDNIPLDQLTPITHNFTPQPNLSDQPENIDLVNDEVRDLV
ESLNASVYENDAHEPQTRSPEKLVTEAPQYVGEDEITPAPSTRVTKRKSL
ASRSKANTAIASRIKQTTPKPSSPSTNDHGIIVIDSDDDGQPQKPVSKAT
SPKLQRFHPGAASRAYRGGRHGKPSARSRSSFMPTSRERQAVSSKRQSNA
GGDELQKSPSVVETDKVTEGKRSSKQIDAKAEDRGRLKEGKSLNVKEGLN
SNSVLKTTTLSDGDDGSPVIVSNNNMEVGQKKPDAGDVIDLQRKDGKRGS
LQAARKKSKDTASPSNRAQIAGILTDTRMEDVARLSIEGKFGKVQEMSGA
KQAGSSNVIEVNDSDAEPDDRGLQEEELSVLKPTQAQRKLTEDIYRIQSC
MNDVDKNFISDKLEWLLDEIVHFHDGRKGSLDAAEYVRVLRDQLVQRRLQ
EIGSIREIPDFKSDPQLKARERL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR043151BAH_sf