Gvermi6946.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6946.t1
Unique NameGvermi6946.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length482
Homology
BLAST of Gvermi6946.t1 vs. uniprot
Match: A0A2V3INN3_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3INN3_9FLOR)

HSP 1 Score: 425 bits (1092), Expect = 8.450e-142
Identity = 251/489 (51.33%), Postives = 333/489 (68.10%), Query Frame = 0
Query:    1 MAGGRRPSSYVSGARHSSGIDRQHVQ------EALTSPPLASATGPSLPPWIPSIWQPAPVQTPSQRVPREKHASVDPSSVLAAALDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSQPLSQRETELHDLVAALRTKLHQRDQDVSSLQNRMDNLEKSLQQQEALSQTHIQH---SKTFIRERLSETRWELDNNVQAYIVPMKKKIEAAEKLVCSQKNYNQ----DVSHLYACSRLINSNFANFRSYVSGEFEKYTAKMKHHEQSFKNISEKLASIVSDAASSNPDIEQVRRSVEAATESLAGVRSKLKKIETQLGEVSKQAEDSIALGSAFEESIRAGLDEITENVSSLYCTVTEIKKALPS---DDTGSCNQPSSELTSKVDSLETNLKALKRLIESNLRTQWSAESIVKEQVSLITKHVCVAMRQYTARRISENNALIDKALRARIPEYAKNDDQFVLVREEDLEGNES-VGIHRS 472
            MAGGRRPSSYVSG RHSS +DRQ VQ      +  ++PPL+S+ GPSLPPWIPSIWQP P+++P+QR  R+K AS+DPSS LAAALDT                                      SQPL+QRE EL DL+ AL+++LHQRD D++SL NRM+ LE  LQQQ  ++Q   ++    K  + +  S++  ELD +V+  +  ++  + +    V   +N N     +++ L   +R ++S     R+++  EFE+   ++       +  +E+L S+ SD +S+ PD+E +RRSVEAA+E +A VRSKLK++ETQ+ +V+++AE+SIAL  AFE+S+  GL++I  +VSSL  TV EIK+ +PS   D T +    + EL +KVD+LETNLKALKRLIES+LRT+  AESIVKEQVSLITKHVCVAMRQYTARRISENNALID+ALRARIPEYA+NDDQFVLVREEDLEGN+S VGIHRS
Sbjct:    1 MAGGRRPSSYVSGVRHSSAVDRQTVQAVPATQDGFSTPPLSSSNGPSLPPWIPSIWQPPPLRSPTQRPSRDKPASLDPSSALAAALDTAVQSAVVRALGSATIASQLTSSSCDSENGLEDET----SQPLTQRENELLDLIVALKSRLHQRDDDIASLNNRMEALEHKLQQQHNVAQVRHENFTTDKAALTKHFSDSFAELDKSVEVRLTTVRDHVRSTNASVSKLRNANSVAEANITALNRRTRELSSQVTQLRTHMKAEFERQAVRVNQLGDHVRASAERLNSLASDVSSA-PDVEHLRRSVEAASEDVATVRSKLKRVETQVSDVTRKAEESIALSGAFEQSVGEGLNQIRASVSSLAGTVKEIKETVPSMATDATITSQTSNHELVAKVDALETNLKALKRLIESSLRTRLHAESIVKEQVSLITKHVCVAMRQYTARRISENNALIDRALRARIPEYAQNDDQFVLVREEDLEGNDSTVGIHRS 484          
BLAST of Gvermi6946.t1 vs. uniprot
Match: R7QG72_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QG72_CHOCR)

HSP 1 Score: 157 bits (398), Expect = 6.560e-43
Identity = 80/114 (70.18%), Postives = 97/114 (85.09%), Query Frame = 0
Query:  368 QPSSELTSKVDSLETNLKALKRLIESNLRTQWSAESIVKEQVSLITKHVCVAMRQYTARRISENNALIDKALRARIPEYAKNDDQFVLVREEDLEGNESVGIHRSQQDSSQTES 481
            +  S++ S+++ +E N+ +LK+LIESNLRTQW+AESIVKEQVSLITKHVCVAMRQYT RRISENNALID+ LRAR+PEYAKN+ QFVLVREED +GNES+ I RS + SS   S
Sbjct:   23 EDESDVFSRLERVECNVNSLKKLIESNLRTQWNAESIVKEQVSLITKHVCVAMRQYTTRRISENNALIDQTLRARVPEYAKNEGQFVLVREEDTDGNESIDIQRSSEVSSDNSS 136          
BLAST of Gvermi6946.t1 vs. uniprot
Match: A0A7S0ZGL3_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZGL3_9RHOD)

HSP 1 Score: 99.8 bits (247), Expect = 1.390e-18
Identity = 81/283 (28.62%), Postives = 129/283 (45.58%), Query Frame = 0
Query:  195 NVQAYIVPMKKKIEAAEKLVCSQKNYNQDVSHLYACSRLINSNFANFRSYVSGEFEKYTAKMKHHEQSFKNISEKLASIVSDAASSNPDIEQVRRSVEAATESLAGVRSKLKKIETQLGEVSKQAEDSIALGSAFEES-----IRAGLDEITENVSSLYCTVTEIKKALPSDDTGSCNQPSSELTSKVDSLETN-----------------LKALKRLIESNLRTQWSAESIVKEQVSLITKHVCVAMRQYTARRISENNALIDKALRARIPEYAKNDDQFVL 455
            N++  +V +  K+E+ E+     K      S L  C   +N +  +         EK TA +++     +++ E+  S           I QV  +V++  E    ++S L  +      + +   DS  L     E      + A L  +   V S+  ++ ++   +         Q +S+  S++D +E N                 +  LK+L+E NLR Q SAE  VK Q S+ITKHVC+AMR++TAR+I ENN  ID ALR R P+YAK+D   VL
Sbjct:  382 NLEKLVVSLSMKLESVEQKQSESKRNVAQTSELSECMNSMNCSIQSS--------EKKTALIQNE---IEHLREEFES----------KIVQVESNVKSILEMTEELKSSLADVVLTPEAIVEPVVDSDVLHRKQHEKRDAGKVEADLSTLNRKVESMQSSLKQLNLKM--------KQLTSKYDSQIDEIEENSVIRDSAVEKMREQLEQMGRLKKLVEQNLRLQSSAEETVKNQASMITKHVCIAMREFTARKIMENNEFIDSALRQRCPDYAKSDSCCVL 635          
BLAST of Gvermi6946.t1 vs. uniprot
Match: M2W850_GALSU (Uncharacterized protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2W850_GALSU)

HSP 1 Score: 62.4 bits (150), Expect = 6.740e-7
Identity = 43/140 (30.71%), Postives = 70/140 (50.00%), Query Frame = 0
Query:  310 TQLGEVSKQAEDSIALGSAFEESIRAGLDEITENVSSLYCTVTEIKKALPSDDTGSCNQPSSELTSKVDSLETNLKALKRLIESNLRTQWSAESIVKEQVSLITKHVCVAMRQYTARRISENNALIDKALRARIPEYAKN 449
            T L E SK  E     G     + +  L+ +     +L+    + K A+   D    ++   +   K+++L    +++K+ +E N+  +  AES+VKEQVSLITK VCV MR+ T+  + ENN  I   L+  I  Y  +
Sbjct:  223 TNLQESSKNRERRKTTGVLSFANYQEQLNRLVGKTETLF---GDAKDAVEKQDI--VDKDLEQSLEKLENLAHTTESIKQFVERNIHIRSDAESLVKEQVSLITKQVCVEMRKITSNILKENNFRIGDMLKRNIEGYGND 357          
The following BLAST results are available for this feature:
BLAST of Gvermi6946.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3INN3_9FLOR8.450e-14251.33Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QG72_CHOCR6.560e-4370.18Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S0ZGL3_9RHOD1.390e-1828.62Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
M2W850_GALSU6.740e-730.71Uncharacterized protein n=1 Tax=Galdieria sulphura... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 370..397
NoneNo IPR availableCOILSCoilCoilcoord: 142..169
NoneNo IPR availableCOILSCoilCoilcoord: 291..311
NoneNo IPR availableGENE3D1.20.1480.30coord: 243..322
e-value: 2.7E-5
score: 26.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 106..130
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 37..51
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..69
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 106..122

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24229contigScGOVlb_24229:714848..716293 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6946.t1Gvermi6946.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24229 714848..716293 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6946.t1 ID=Gvermi6946.t1|Name=Gvermi6946.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=482bp
MAGGRRPSSYVSGARHSSGIDRQHVQEALTSPPLASATGPSLPPWIPSIW
QPAPVQTPSQRVPREKHASVDPSSVLAAALDTAVQSAVERALGGAAGAAI
STSQLTASSSNSDNGTEDETSQPLSQRETELHDLVAALRTKLHQRDQDVS
SLQNRMDNLEKSLQQQEALSQTHIQHSKTFIRERLSETRWELDNNVQAYI
VPMKKKIEAAEKLVCSQKNYNQDVSHLYACSRLINSNFANFRSYVSGEFE
KYTAKMKHHEQSFKNISEKLASIVSDAASSNPDIEQVRRSVEAATESLAG
VRSKLKKIETQLGEVSKQAEDSIALGSAFEESIRAGLDEITENVSSLYCT
VTEIKKALPSDDTGSCNQPSSELTSKVDSLETNLKALKRLIESNLRTQWS
AESIVKEQVSLITKHVCVAMRQYTARRISENNALIDKALRARIPEYAKND
DQFVLVREEDLEGNESVGIHRSQQDSSQTES*
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