Gvermi6898.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6898.t1
Unique NameGvermi6898.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length257
Homology
BLAST of Gvermi6898.t1 vs. uniprot
Match: A0A2V3IUG9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUG9_9FLOR)

HSP 1 Score: 211 bits (537), Expect = 6.410e-65
Identity = 122/257 (47.47%), Postives = 163/257 (63.42%), Query Frame = 0
Query:    1 MEVVVATSILSQVAVFVINRFTSKYDVVARSRESDTLHQAPTNSQPQPQPRLIHVADQQNHQNNTEQSPDESSKPEAESDENSIEFLEHRLKHLKTQAKRLNAPDTLVQYARVTREANKVEKALNEKKAEQRINAAEPLARDAVTGALTKLMKPHV-GAVRYGVANQIIRAAPRVISFVFLWYYFSWREGSANQGIAMTVDCQALRPISFLFRKLPPSCLDDDWLCVVQASQAPQCVISYSWALILCNIVISTLLQA 256
            MEVV+ATS+++   V  ++R+ +K +  A         +  T S  QPQ              N   + +ES+  + E  E SIEFLE RLK L+ QAKRLNAPDTLVQYARVTREANKVEK +NEKKA + I        DA++ A T ++ P     VR  + +Q++R  PRV+ F FLWYYFSWR G+  QG  MT+DC+ALRP+S+LFRK    C +++W+C   A+Q PQC ISYSWAL+ CN+VI+T+ +A
Sbjct:    1 MEVVIATSLIAHFGVLAVDRYIAKLEASAVGDVPHATDEQQTISSSQPQ-------------GNESATKNESAVTKPE--EGSIEFLEMRLKELRNQAKRLNAPDTLVQYARVTREANKVEKDVNEKKAAEGITEEPSANVDALSRAFTSMVTPGATSVVRRRINSQMLRTVPRVLGFAFLWYYFSWRSGALRQGNVMTIDCEALRPLSWLFRKQWRMCSEEEWVC---AAQRPQCAISYSWALVFCNMVIATIFKA 239          
BLAST of Gvermi6898.t1 vs. uniprot
Match: R7Q5M8_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q5M8_CHOCR)

HSP 1 Score: 143 bits (360), Expect = 2.890e-38
Identity = 98/263 (37.26%), Postives = 144/263 (54.75%), Query Frame = 0
Query:    1 MEVVVATSILSQVAVFVINRFTSKYD--VVARSRESDTLHQAPTNSQPQPQPRLIHVADQQNHQNNTEQSPDESSKP-EAESD---ENSIEFLEHRLKHLKTQAKRLNAPDTLVQYARVTREANKVEKALNEKKAEQRINAAEPLARDAVTGALTKLMKPHV-GAVRYGVANQIIRAAPRVISFVFLWYYFSWREGSANQGIAMTVDCQALRPISFLFRKLPPSCLDDDWLCVVQASQAPQCVISYSWALILCNIVISTLLQA 256
            MEVV+  S LS +   +I+ + S+    ++    E DT  Q  +NS+                 +  E +P   + P EA+++   E SI  LE ++KHL+ +AKR+NAPDT VQYAR+TREANKVEK L EKKA +  +    +  D V   L+K + P    +++      +++A  R + F+ LW+YFS          A+ +DC+A RP+SF+F K  PSC DD W+C   A+Q PQC +SY   L+L N V   + QA
Sbjct:    1 MEVVLLGSALSNLCALLIDAYASRAQRPLIQPPAEPDTTTQRASNSK-----------------DRVEAAPASDANPQEADAEQFPEGSIPALEKKVKHLRAEAKRVNAPDTFVQYARLTREANKVEKELTEKKALEPSDTHGTVLPD-VMAMLSKAVTPQAQSSMKRRAQFMVLKAIVRALPFLLLWWYFSPFGYDRGPADALVIDCRAFRPLSFIFSKREPSCGDDHWMC---AAQPPQCAVSYWMVLVLANTVFPMIFQA 242          
The following BLAST results are available for this feature:
BLAST of Gvermi6898.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IUG9_9FLOR6.410e-6547.47Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q5M8_CHOCR2.890e-3837.26Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 77..97
NoneNo IPR availableCOILSCoilCoilcoord: 110..130
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 35..70
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 32..84
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 255..256
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..235
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 236..254

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24229contigScGOVlb_24229:389408..390321 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6898.t1Gvermi6898.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24229 389408..390321 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6898.t1 ID=Gvermi6898.t1|Name=Gvermi6898.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=257bp
MEVVVATSILSQVAVFVINRFTSKYDVVARSRESDTLHQAPTNSQPQPQP
RLIHVADQQNHQNNTEQSPDESSKPEAESDENSIEFLEHRLKHLKTQAKR
LNAPDTLVQYARVTREANKVEKALNEKKAEQRINAAEPLARDAVTGALTK
LMKPHVGAVRYGVANQIIRAAPRVISFVFLWYYFSWREGSANQGIAMTVD
CQALRPISFLFRKLPPSCLDDDWLCVVQASQAPQCVISYSWALILCNIVI
STLLQA*
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