Gvermi6896.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male
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Overview
Homology
BLAST of Gvermi6896.t1 vs. uniprot
Match: A0A2V3IX96_9FLOR (RRM domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IX96_9FLOR) HSP 1 Score: 436 bits (1122), Expect = 1.190e-148 Identity = 251/424 (59.20%), Postives = 313/424 (73.82%), Query Frame = 0
Query: 1 MDDDWASEGEEEGLGDLSDIPDIDIPPQQRQNPGPPHKSQLPPTAVRPP----PRQNAWTKPIQSQQVRSAAQQP----QQPRGH--HRRQNSFPSSFASKSDRFDSDPQRLERRTSNVPTTNLYVANLPYETHEQAIGDFFNVNTIDVFGIRIMRHSDTGKIKAALVTIPTDHVPRALATDGKLFGGRAMHVKVDGTDGKRGGRDKDRGERSHGKNPAF-ASFGTRAPP-NGSSRPGSAWNDRGPGLSFDSQLSRRPSDTSREDRRSRAGSHSRDLTIPTGPPPAGRKKLQLMPRTKPTPSMPVNKRNANQPSAPQTVVPAPGRQENESFPQAKGSGAPRKGNSAGADRVN-RNDRDAEKFDKVERRDRGGKASEEPASKWTNSKETNISRQSSQPTSKKEDETKRPVLLNTFAALELNDSDA 411
MDDDWASEGEEEGLGDLSDIPD+D+P Q K+ LP +PP PRQNAWTKP QSQQVRSA Q P QQP+G HRRQNSFP+SF S +R R + R+ PTT LYV NLPY+THEQAIGDFF +++ V GIR+++H DTG I+AALVT+ DHVP+ALA DG++FGGR ++VK+DGTDGKRG R GERS +NP+F +SFGTRAPP NG++R S+W+DRGPG S DSQL+RR SD R+DRRSR ++D +IP GPPPAGRKKLQLMPRTKP P + V++R +Q PQ+ +PAPGRQ++E F Q + PR+ NS G +R + R DR +++FD+V+RRDRG + ++ +KWTNSKET SR SSQPT+KKED++KRPVL NTFAAL++ D DA
Sbjct: 1 MDDDWASEGEEEGLGDLSDIPDVDLPVQI--------KTPLPEPTPQPPAPVVPRQNAWTKPNQSQQVRSAVQSPAQHQQQPQGRALHRRQNSFPASFGSNLERPSQPAPRHQPRSHTGPTTTLYVTNLPYQTHEQAIGDFFTASSVHVVGIRLVKHPDTGNIRAALVTVVADHVPKALAVDGRMFGGRTIYVKIDGTDGKRGAR----GERSQSRNPSFGSSFGTRAPPLNGNARS-SSWHDRGPGHSIDSQLTRRASDN-RDDRRSRLAPLAKDPSIPVGPPPAGRKKLQLMPRTKPPPELQVDQRAISQQKPPQSAMPAPGRQDSEKFSQNRAGPPPRRVNSYGGERSSTRGDRSSDRFDRVDRRDRGPRM-DDSRNKWTNSKETATSRPSSQPTAKKEDDSKRPVLQNTFAALDIKDPDA 409
BLAST of Gvermi6896.t1 vs. uniprot
Match: R7Q424_CHOCR (Possible translation initiation factor eIF4, subunit H n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q424_CHOCR) HSP 1 Score: 135 bits (341), Expect = 1.240e-32 Identity = 129/346 (37.28%), Postives = 172/346 (49.71%), Query Frame = 0
Query: 99 PQRLERRTSNVP---TTNLYVANLPYETHEQAIGDFFNVNTIDVFGIRIMRHSDTGKIKAALVTIP-TDHVPRALATDGKLFGGRAMHVKVDGTDGKRGGRDKDRGERSHGKNPAFASFGTRAPPNGSSRPG---SAWNDRGPGLSFDSQLSRRPSDTSREDRRSR--------AGSHSRDLTIPTGPPPAGRKKLQLMPRTKPTPSMPVNKRNAN--QPSAPQTVVPAPGRQEN----ESFPQAKGSG----APRKGNSAGADRVNRNDRDAEKFD-KVER----RDRGGKASEEPASKWTNSKETNISRQS--SQPTSKKEDETK-RPVLLNTFAALELNDSDA 411
P+R ++ P TT LYV +LP++T E I F + + + RH+DTG IKAALVTI +++ LA DG GR +HVKVDG GG ++R G + P+G R S W DR G FD R SR A D TIPTGPPPAGRKKL L PRTKP P + V+ R + +PS P +V R EN ++ + SG AP S GAD N ++ D KVE+ +D K E +W+++KE + S +Q ++KK+D++K RPVLLNTFAALE+ND+DA
Sbjct: 27 PRRQPSSPASAPAGSTTTLYVFHLPFDTSEVEIASLFRHCAVTPADVHLTRHNDTGNIKAALVTIRGEENLSAGLAVDGAKLSGRPVHVKVDGDRRGSGGGQRERSGYGFGSKDRRMEAMPSSSPHGGQRDSTWSSGWTDRSGGGGFDQSSRGERGVEGRSAGASRGAGVTPRGASEQREDPTIPTGPPPAGRKKLVLKPRTKPPPVLEVDTRAIDGVKPSVPSSVSQPRHRFENSDPSKNLAMRQNSGPRVTAPL---SEGADP---NPKEVTPADPKVEKWTTPKDATAKTQGE---RWSSAKEGAPQKASGTAQGSNKKDDDSKKRPVLLNTFAALEVNDADA 363 The following BLAST results are available for this feature:
BLAST of Gvermi6896.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 2
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gvermi6896.t1 ID=Gvermi6896.t1|Name=Gvermi6896.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=412bpback to top |