Gvermi6888.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6888.t1
Unique NameGvermi6888.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length536
Homology
BLAST of Gvermi6888.t1 vs. uniprot
Match: A0A2V3IUF9_9FLOR (Dynein alpha chain, flagellar outer arm n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUF9_9FLOR)

HSP 1 Score: 528 bits (1360), Expect = 5.540e-181
Identity = 292/556 (52.52%), Postives = 367/556 (66.01%), Query Frame = 0
Query:    1 MEWLGDFTPRESSPSPRKGHTLTNLLDTPIILLFAGEDEAGVLLDDMYALHIERREWKRVTYAPGPKPPPRLLHTAVAVSSTLLVVIGGDTWNATEVTESEQTNATALNDIWVFDYSNGSWQEIKDTGSVKLPCLSCSSAVFGRAKSQVPGVYIFGGYSREKTNLNVVYRLRINDWKLEILPHVENDSNGRKRVINSNEDLKSSGVLNQLKNCKKSEDSKISETPDSRVL---PKERESHGAIWLPGTGMLVVGGDGGSSILGDSWLFLQHADDPESWKWQELRLIPTGNRAGNRLPRLAGHSLIALPTNTVKVMVWGGILNSGEEVMGSDVSYVIDVEKANVAQSIRVTNTGRTPRAGRILHGLVRARDKLFAFGGCDSDGKSHIGVQYGRLLPNFKALNQAASYFGSEAAAMAMHGAQLEK------RNLDEE----KPLQGWSARNP--SNNVARTPLTGKVSEVMDIGLLVSIEIDGKSFKGVLVASGTDDEEMADVSDEIKQANKGYNSG--ETKPGKRPKLHAAAEALPDSP---PKVRP-SRNEVFLLE 535
            MEWLG+F  R  +P PRKGHT+T LL+TP++++F GEDE G L +DM+ LH+ERR+W  VTYA GPKP PRLLHTAVA+SS +L++IGG+TW   E   +E +   A+NDIWVFDY + SW+EI  +   +LP LSC SAVFGRAK QVPGVYIFGG+ R + N +VVY+LR +DWKLE +           RV+NS +              +K   + I  +P+   +   P+ERESHGAIWLPG GMLVVGGDGGSSILGD WLF Q   DP++W+W+E+ L P G +  NRLP LAGHSL+ALPT+TV+V+VWGGILNSG+EVM S+ SYVID+++ + A + RV N G+TP  GRILHG  RA D LFA GGCD+DG    G QYGRLLP  KA  QAA +FG +A   A+    ++       +N   E    K +Q  + ++   +N  +R P  GKV EV D+GLLVSI IDGK FKGVLV + T+ +       E K    G  S   E  P K+PKL  AAEALPDSP   PK +P SR EV  LE
Sbjct:    1 MEWLGNFEARGPAPPPRKGHTMTRLLNTPLLVMFGGEDETGSLQNDMFVLHVERRQWHNVTYASGPKPSPRLLHTAVAISSHMLIIIGGETW---ETGGTEVSPTIAMNDIWVFDYYDSSWREIGRSDFERLPVLSCLSAVFGRAKGQVPGVYIFGGFGRSERNGSVVYKLRTSDWKLETI-----------RVVNSKK--------------RKDTHNSIGRSPNPEKITWHPRERESHGAIWLPGYGMLVVGGDGGSSILGDCWLFFQDEKDPQTWRWKEIHLKPVGGQTENRLPPLAGHSLVALPTSTVQVLVWGGILNSGQEVMDSEFSYVIDLDRLDRAHTRRVKNVGKTPATGRILHGFARANDLLFAVGGCDADGNVLPGTQYGRLLPKLKASVQAARFFGPKALRTAVGETDVKTDVNNAVQNTGTEDSAAKKVQAKANKDADGTNGRSRGPFPGKVLEVTDMGLLVSIVIDGKPFKGVLVKNPTNGKREKKEGAEDKMQIDGQKSKPLEAVPRKKPKLDPAAEALPDSPEIRPKPKPISREEVIQLE 528          
BLAST of Gvermi6888.t1 vs. uniprot
Match: A0A838RC22_9CHLR (Uncharacterized protein n=1 Tax=Ardenticatenales bacterium TaxID=2614248 RepID=A0A838RC22_9CHLR)

HSP 1 Score: 62.0 bits (149), Expect = 2.050e-6
Identity = 72/328 (21.95%), Postives = 133/328 (40.55%), Query Frame = 0
Query:   14 PSPRKGHTLTNLLDTPIILLFAGEDEAGVLLDDMYALHIERREWKRVTYAPGPKPPPRLLHTAVAVSSTLLVVIGGDTWNATEVTESEQTNATALNDIWVFDYSNGSWQEIKDTGSVKLPCLSCSSAVFGRAKSQVPGVYIFGGYSREKTNLNVVYRLRINDWKLEILPHVENDSNGRKRVINSNEDLKSSGVLNQLKNCKKS------EDS-----------KISET-PDSRVLPKERESHGAIWLPGTGMLVVGGDGGS--SILGDSWLFLQHADDPESWKWQELRL--IPTGNRAGNRLPRLAGHSLIALPTNTVKVMVWGGILN 319
            PSPR+   L        ++LF G        +D +A  ++ + W+ +  +  P+PP R    A   S    ++I          T  +  + +  +D+W FD +N +WQ+I+ +G    P    +  +F  + +    +Y+  G++  + N    + L  N W   + P  +   N   R ++    +   G L     C         EDS           +ISET P +R  P      G + L     +++ G GG+  + L D W+      D    +W+E+     P   R G+ + R+    + + P++   ++V+GG  N
Sbjct:  422 PSPRRDAALVADTTRNRVILFGGRS-GSTAFNDTWAFDLKTQSWQLLGSSEAPRPPARFSMVAGVDSMRERLII----------TTGQAADGSVFDDVWSFDLTNDTWQQIEASGEAPAPRYGAAGGIFDYSDA----LYLTHGFADTRYNDTWAFDLERNSWS-NVTPEGDLPLN---RCLHGAA-MTGPGSLALFGGCSSGFGPCPQEDSWVLDPTTTQWRQISETGPSARTFP------GMVSLADRSEVLLFGGGGAEQADLNDVWIL-----DSVLEQWREVNPEGTPPTARDGHSMTRVMTFDIGSAPSSGSHILVFGGESN 718          
The following BLAST results are available for this feature:
BLAST of Gvermi6888.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IUF9_9FLOR5.540e-18152.52Dynein alpha chain, flagellar outer arm n=1 Tax=Gr... [more]
A0A838RC22_9CHLR2.050e-621.95Uncharacterized protein n=1 Tax=Ardenticatenales b... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13418Kelch_4coord: 16..68
e-value: 3.6E-8
score: 33.2
coord: 70..126
e-value: 2.0E-8
score: 34.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 484..535
NoneNo IPR availablePANTHERPTHR46093ACYL-COA-BINDING DOMAIN-CONTAINING PROTEIN 5coord: 219..380
coord: 11..162
IPR015915Kelch-type beta propellerGENE3D2.120.10.80coord: 198..407
e-value: 1.9E-13
score: 52.1
IPR015915Kelch-type beta propellerGENE3D2.120.10.80coord: 2..197
e-value: 1.0E-24
score: 89.5
IPR011043Galactose oxidase/kelch, beta-propellerSUPERFAMILY50965Galactose oxidase, central domaincoord: 10..321

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24229contigScGOVlb_24229:363872..365479 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6888.t1Gvermi6888.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24229 363872..365479 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6888.t1 ID=Gvermi6888.t1|Name=Gvermi6888.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=536bp
MEWLGDFTPRESSPSPRKGHTLTNLLDTPIILLFAGEDEAGVLLDDMYAL
HIERREWKRVTYAPGPKPPPRLLHTAVAVSSTLLVVIGGDTWNATEVTES
EQTNATALNDIWVFDYSNGSWQEIKDTGSVKLPCLSCSSAVFGRAKSQVP
GVYIFGGYSREKTNLNVVYRLRINDWKLEILPHVENDSNGRKRVINSNED
LKSSGVLNQLKNCKKSEDSKISETPDSRVLPKERESHGAIWLPGTGMLVV
GGDGGSSILGDSWLFLQHADDPESWKWQELRLIPTGNRAGNRLPRLAGHS
LIALPTNTVKVMVWGGILNSGEEVMGSDVSYVIDVEKANVAQSIRVTNTG
RTPRAGRILHGLVRARDKLFAFGGCDSDGKSHIGVQYGRLLPNFKALNQA
ASYFGSEAAAMAMHGAQLEKRNLDEEKPLQGWSARNPSNNVARTPLTGKV
SEVMDIGLLVSIEIDGKSFKGVLVASGTDDEEMADVSDEIKQANKGYNSG
ETKPGKRPKLHAAAEALPDSPPKVRPSRNEVFLLE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015915Kelch-typ_b-propeller
IPR011043Gal_Oxase/kelch_b-propeller