Gvermi6881.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6881.t1
Unique NameGvermi6881.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length158
Homology
BLAST of Gvermi6881.t1 vs. uniprot
Match: A0A2V3IUF0_9FLOR (SHSP domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUF0_9FLOR)

HSP 1 Score: 123 bits (308), Expect = 8.730e-33
Identity = 74/165 (44.85%), Postives = 102/165 (61.82%), Query Frame = 0
Query:    6 SQSHAPRNP-FAPHPYSNLLSQKHSSTPP---TIEPVYHHQLHEHNIFVQVELPGVLKQHISLEIHDNHLVLCAKRFRVSKLA-----TRTRDHQPVTEAD-----LCTDQNDAAKEPAFVYALEMRMRHDADADAVRVDGYEDGILTIRIPLIHSSAPRKITID 156
            S SH+   P F P  YS+ LS  H  TP    T+EP Y ++ ++ + F+QVELPGV K+HIS+EI  +HL L A+RFR SKLA     T   D     +AD       ++   A   PAF Y LE+R+ +D D +AV+V+ Y +GILTIRIP++ S++ RKITI+
Sbjct:    3 SSSHSTLTPWFWPQGYSSALSH-HPRTPSSSQTVEPSYFYESNQDSAFLQVELPGVAKEHISIEIQGHHLTLSARRFRTSKLAPLSSSTEGGDAAEAQDADHTATPAASEPGPADPTPAFTYVLELRLANDTDLEAVKVESYVNGILTIRIPVVSSTSSRKITIE 166          
BLAST of Gvermi6881.t1 vs. uniprot
Match: R7QS04_CHOCR (Heat Shock Protein 20, HSP20 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QS04_CHOCR)

HSP 1 Score: 82.0 bits (201), Expect = 1.010e-16
Identity = 44/128 (34.38%), Postives = 66/128 (51.56%), Query Frame = 0
Query:   34 TIEPVYHHQLHEHNIFVQVELPGVLKQHISLEIHDNHLVLCAKRFRVSKLATRTRDHQPVTEADLCTDQNDAAKE-----PAFVYALEMRMRHDADADAVRVDGYEDGILTIRIPLIHSSAPRKITID 156
            T+EP Y ++        ++E+PGV K ++S+E+HDN L +  KRFR  +     +D  P    D      D A       P+ VY LE R+   A+ DA++ D   DGIL + IP++     RKI I+
Sbjct:   42 TVEPSYRYEADGEAAHFEIEIPGVSKDNLSVEVHDNKLTVRGKRFR--RPLIEKKDDDPAAAKDPAAQNGDPAHPGEDPVPSIVYLLEARLPQGANVDAIKADHVGDGILNMTIPMVADKGTRKIQIE 167          
BLAST of Gvermi6881.t1 vs. uniprot
Match: R7Q6X4_CHOCR (Heat Shock Protein 20, HSP20 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q6X4_CHOCR)

HSP 1 Score: 80.9 bits (198), Expect = 2.680e-16
Identity = 43/126 (34.13%), Postives = 66/126 (52.38%), Query Frame = 0
Query:   34 TIEPVYHHQLHEHNIFVQVELPGVLKQHISLEIHDNHLVLCAKRF---RVSKLATRTRDHQPVTEADLCTDQNDAAKEPAFVYALEMRMRHDADADAVRVDGYEDGILTIRIPLIHSSAPRKITID 156
            T+EP Y ++        ++E+PGV K ++S+E+H+N L +  KRF    + K         P    D   DQ D    P+ VY LE R+   A+ DA++ D   DGIL + IP++    PRK+ I+
Sbjct:   42 TVEPSYRYEADSAAAHFEIEIPGVSKDNLSVEVHENKLTVRGKRFCRPLIEKKDNSAVAKDPAQNGD--PDQADKDPAPSIVYHLEARLPQRANVDAIKADHIGDGILNMTIPMVDDKGPRKVQIE 165          
BLAST of Gvermi6881.t1 vs. uniprot
Match: A0A2V3IM19_9FLOR (Small heat shock protein C4 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IM19_9FLOR)

HSP 1 Score: 70.5 bits (171), Expect = 2.570e-12
Identity = 41/117 (35.04%), Postives = 69/117 (58.97%), Query Frame = 0
Query:   37 PVYHHQLHEHNIFVQVELPGVLKQHISLEIHDNHLVLCAKRFRVSKLATRTRDHQPVTEADLCTDQNDA----AKEPAFVYALEMRMRHDADADAVRVDGYEDGILTIRIPLIHSSA 149
            P Y +Q    N  +QVELPGV K+HI ++I+  +L + A+RFR S+  + ++  +  T+    T +NDA    + +P+ VY +++ +    D DA++ D Y  G+L++ IPL   SA
Sbjct:   45 PNYEYQRDNDNFHLQVELPGVAKEHIDVKINTGNLTIIARRFRPSQAESGSQKPEQSTQV---TAENDADVTQSPKPSHVYKMQVEVGSTVDEDAIKAD-YNHGVLSMVIPLKKISA 157          
BLAST of Gvermi6881.t1 vs. uniprot
Match: A0A2V3J651_9FLOR (Heat shock protein-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J651_9FLOR)

HSP 1 Score: 69.3 bits (168), Expect = 5.530e-12
Identity = 40/120 (33.33%), Postives = 66/120 (55.00%), Query Frame = 0
Query:   37 PVYHHQLHEHNIFVQVELPGVLKQHISLEIHDNHLVLCAKRFRVSKLATRTRDHQPVTEADLCTDQNDAA-KEPAFVYALEMRMRHDADADAVRVDGYEDGILTIRIPLIHSSAPRKITI 155
            P Y  Q    NI +QVELPGV K+HI LE++   L + A+RF+ S     +++ +  TE     D ++A   +P+ VY L ++   + D + ++ + Y  GIL I +P+   +  RKI +
Sbjct:   32 PNYEFQRDNDNINLQVELPGVAKEHIDLEMNSGKLTITARRFKASHSQPPSKESEQATEEKGGRDAHEAELPQPSCVYKLHVKTGTNVDDEGIKAE-YNHGILNIVLPMKKVNTARKIAL 150          
BLAST of Gvermi6881.t1 vs. uniprot
Match: A0A2R4G0U1_GRALE (Heat shock protein n=2 Tax=Gracilariopsis TaxID=2781 RepID=A0A2R4G0U1_GRALE)

HSP 1 Score: 66.2 bits (160), Expect = 1.080e-10
Identity = 40/123 (32.52%), Postives = 70/123 (56.91%), Query Frame = 0
Query:   37 PVYHHQLHEHNIFVQVELPGVLKQHISLEIHDNHLVLCAKRFRVSKLATRTRDHQPVTEADLCTDQNDAAK----EPAFVYALEMRMRHDADADAVRVDGYEDGILTIRIPLIHSSAPRKITI 155
            P Y +   + N  +QVELPGV K+HI +E++  +L + A+RFR S     +++    TE    T +NDA K    +P+ VY +++++ ++ D + ++ + Y  G+L + IP       RKI+I
Sbjct:   46 PNYEYNRDKDNFHLQVELPGVAKEHIEVEMNSGNLTITARRFRSSPAQPVSQEPDQSTEN---TGENDANKTRSLKPSHVYKMQVKIGNNVDEEGIKAE-YNHGVLELIIPQ-RKMTTRKISI 163          
BLAST of Gvermi6881.t1 vs. uniprot
Match: Q7XZ71_GRIJA (Heat shock protein 16 n=1 Tax=Griffithsia japonica TaxID=83288 RepID=Q7XZ71_GRIJA)

HSP 1 Score: 61.6 bits (148), Expect = 4.060e-9
Identity = 41/133 (30.83%), Postives = 70/133 (52.63%), Query Frame = 0
Query:   27 KHSSTPPTIEPVYHHQLHEHNIFVQVELPGVLKQHISLEIHDNHLVLCAKRF-RVSKLATRTRDHQPVTEADLCTDQNDAAKEPAFV-----YALEMRMRHDADADAVRVDGYEDGILTIRIPLIHSSAPRKI 153
            ++S  P  I P +     +    +QVELPGV K+ I +E++   L +   R+ +V+  A    D           ++ D+ KEP+       Y+LE+++  DAD D +  + Y +GILT++IP++H  + RKI
Sbjct:   22 RNSCRPDRIIPSHFIHSGDKEAMLQVELPGVGKEDIEVEVNRRTLYVNGTRYDQVTSTAAVNND----------ANEEDSGKEPSEKRVERKYSLEIQLGSDADMDGISFESYNNGILTLKIPIVHQES-RKI 143          
BLAST of Gvermi6881.t1 vs. uniprot
Match: A0A2V3J372_9FLOR (Small heat shock protein C4 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J372_9FLOR)

HSP 1 Score: 53.9 bits (128), Expect = 4.710e-6
Identity = 33/120 (27.50%), Postives = 59/120 (49.17%), Query Frame = 0
Query:   37 PVYHHQLHEHNIFVQVELPGVLKQHISLEIHDNHLVLCAKRFRVSKLATRTRDHQPVTEADLCTDQNDAAKEPAF-VYALEMRMRHDADADAVRVDGYEDGILTIRIPLIHSSAPRKITI 155
            P Y +Q +   I +QVELPGV K+HI +E++   L + A+R R+S     +++                       +Y L++R+  + D + ++ + Y  GIL + +PL    + R+I I
Sbjct:   46 PNYEYQRNNDKITLQVELPGVAKEHIDVEMNSGKLTITARRLRLSHAQPSSKESXXXXXXXXXXXXXXXXXXXXXXLYKLQVRISTNVDDEGIKAE-YNHGILNMILPLKKIDSARRIAI 164          
BLAST of Gvermi6881.t1 vs. uniprot
Match: A0A7Y2N7N8_9ACTN (Hsp20/alpha crystallin family protein n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2N7N8_9ACTN)

HSP 1 Score: 53.1 bits (126), Expect = 7.080e-6
Identity = 35/115 (30.43%), Postives = 55/115 (47.83%), Query Frame = 0
Query:   47 NIFVQVELPGVLKQHISLEIHDNHLVLCAKR-FRVS---KLATRTRDHQPVTEADLCTDQNDAAKEPAFVYALEMRMRHDADADAVRVDGYEDGILTIRIPLIHSSAPRKITIDS 157
            N++V  +LPGV    I +++  N L + A R +R S   +L  R R H                      Y  ++ +    DADA+  D Y+DG+LT+RIP+   + PRKI + +
Sbjct:   39 NVWVHADLPGVNADSIDIDVERNVLTITADRAWRASDGDQLYFRERQHG--------------------TYRRQLNLGDGLDADAIEAD-YQDGVLTLRIPVAERAKPRKIAVGT 132          
The following BLAST results are available for this feature:
BLAST of Gvermi6881.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A2V3IUF0_9FLOR8.730e-3344.85SHSP domain-containing protein n=1 Tax=Gracilariop... [more]
R7QS04_CHOCR1.010e-1634.38Heat Shock Protein 20, HSP20 n=1 Tax=Chondrus cris... [more]
R7Q6X4_CHOCR2.680e-1634.13Heat Shock Protein 20, HSP20 n=1 Tax=Chondrus cris... [more]
A0A2V3IM19_9FLOR2.570e-1235.04Small heat shock protein C4 n=1 Tax=Gracilariopsis... [more]
A0A2V3J651_9FLOR5.530e-1233.33Heat shock protein-like n=1 Tax=Gracilariopsis cho... [more]
A0A2R4G0U1_GRALE1.080e-1032.52Heat shock protein n=2 Tax=Gracilariopsis TaxID=27... [more]
Q7XZ71_GRIJA4.060e-930.83Heat shock protein 16 n=1 Tax=Griffithsia japonica... [more]
A0A2V3J372_9FLOR4.710e-627.50Small heat shock protein C4 n=1 Tax=Gracilariopsis... [more]
A0A7Y2N7N8_9ACTN7.080e-630.43Hsp20/alpha crystallin family protein n=1 Tax=Acid... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008978HSP20-like chaperoneGENE3D2.60.40.790coord: 37..157
e-value: 1.4E-10
score: 43.0
IPR008978HSP20-like chaperoneSUPERFAMILY49764HSP20-like chaperonescoord: 30..156
IPR002068Alpha crystallin/Hsp20 domainPFAMPF00011HSP20coord: 44..155
e-value: 8.9E-5
score: 22.6
IPR002068Alpha crystallin/Hsp20 domainPROSITEPS01031SHSPcoord: 29..157
score: 10.230053
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 19..36
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..38
NoneNo IPR availableCDDcd00298ACD_sHsps_p23-likecoord: 45..143
e-value: 9.02363E-9
score: 47.9691

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24229contigScGOVlb_24229:345503..345976 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6881.t1Gvermi6881.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24229 345503..345976 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6881.t1 ID=Gvermi6881.t1|Name=Gvermi6881.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=158bp
MFAANSQSHAPRNPFAPHPYSNLLSQKHSSTPPTIEPVYHHQLHEHNIFV
QVELPGVLKQHISLEIHDNHLVLCAKRFRVSKLATRTRDHQPVTEADLCT
DQNDAAKEPAFVYALEMRMRHDADADAVRVDGYEDGILTIRIPLIHSSAP
RKITIDS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008978HSP20-like_chaperone
IPR002068A-crystallin/Hsp20_dom