Gvermi6874.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6874.t1
Unique NameGvermi6874.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length294
Homology
BLAST of Gvermi6874.t1 vs. uniprot
Match: A0A2V3IUE5_9FLOR (PDDEXK_1 domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUE5_9FLOR)

HSP 1 Score: 362 bits (928), Expect = 1.160e-123
Identity = 168/237 (70.89%), Postives = 193/237 (81.43%), Query Frame = 0
Query:   55 YRLAPSDFAFLWEECKRCFYLKVHGALPRPRAPFPSIFTSIDLGMKRHMSGLRTNELFPGMRPGTFLCEDDDPWIECLPIIPPGQSHGAYIRGKIDALIRFDDGTFGIIDFKTSSVAKTSSTYSRQLHAYAAAMENPSDKSQLKKVLISELGLVVYTPSEFHTPLDMEGKLKAAMTGGIKYVKIERDDPGFHQFLGEVIDVLKKPEAPSPKLATGRNFSSCPYCNYLHQAQKSGLLL 291
            YRLAPSDFAFLWEECKRCFYLKVHG LPRPRAPFPSIF+ IDL MKR MSGL+TN L P MRPG FLCE++DPWIECLPI PPG  +  YIRGK+DA++ + DGT+GIIDFKTSS    S+ YSRQLHAYA A+ENP+  S LKK  ISELGLV+Y+PSEFHTP+D EG+++AAMTG +KYVK+ERDD GF QFLGEV+DVL  PEAP        +  +CPYC YLHQA+ SGLLL
Sbjct:    2 YRLAPSDFAFLWEECKRCFYLKVHGILPRPRAPFPSIFSKIDLCMKRRMSGLQTNSLIPDMRPGKFLCEEEDPWIECLPITPPGHKNSVYIRGKLDAMVEYADGTYGIIDFKTSSSTGASTLYSRQLHAYATAIENPTTDSPLKKARISELGLVIYSPSEFHTPVDSEGRVQAAMTGDLKYVKVERDDAGFLQFLGEVLDVLNMPEAPPFSSRIRSSAPTCPYCKYLHQARDSGLLL 238          
BLAST of Gvermi6874.t1 vs. uniprot
Match: A0A7S1TB95_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TB95_9RHOD)

HSP 1 Score: 224 bits (572), Expect = 1.550e-67
Identity = 112/232 (48.28%), Postives = 147/232 (63.36%), Query Frame = 0
Query:   52 EENYRLAPSDFAFLWEECKRCFYLKVHGALPRPRAPFPSIFTSIDLGMKRHMSGLRTNELFPGMRP--GTFLCEDDDPWIECLPI-IPPGQSHGAYIRGKIDALIRFDDGTFGIIDFKTSSVAKTSSTYSRQLHAYAAAMENPSDKSQLKKVLISELGLVVYTPSEFHTPLDMEGKLKAAMTGGIKYVKIERDDPGFHQFLGEVIDVLKKPEAPSPKLATGRNFSSCPYCNY 280
            +  Y L+PSDFAFLW+EC RC+Y KVHG L RPR PFPSIF  IDL M+    G RT ++F G     G FLCE+DD W+E  PI +P   S    IRGKID LIR DDG++ +IDFKTS+V    + Y RQL AYA AMENP+  + L+K+ +S+LGLVV+ PSEF        + +A + G + Y+   R    F +FL EV+ VL   +  SP + +G    +CP+C+Y
Sbjct:  167 QRQYTLSPSDFAFLWDECPRCYYYKVHGILSRPRLPFPSIFNRIDLQMRSFFRGKRTEDIFSGQTAPAGEFLCEEDDAWVESQPINVPSHPSSSIVIRGKIDCLIRLDDGSYAVIDFKTSNVDTWLTKYDRQLEAYATAMENPAPNADLEKLKVSQLGLVVFEPSEFGHVQKNNSRTRAELGGSLTYIDRPRQTSAFSKFLQEVVAVL---DDDSPPVRSGGMRQNCPFCSY 395          
BLAST of Gvermi6874.t1 vs. uniprot
Match: A0A5J4YTQ4_PORPP (PDDEXK_1 domain-containing protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YTQ4_PORPP)

HSP 1 Score: 218 bits (555), Expect = 4.880e-66
Identity = 114/246 (46.34%), Postives = 157/246 (63.82%), Query Frame = 0
Query:   55 YRLAPSDFAFLWEECKRCFYLKVHGALPRPRAPFPSIFTSIDLGMKRHMSGLRTNELFPGMRPGTFLCEDDDPWIECLPIIPPGQSHGAYIRGKIDALIRFDDG-TFGIIDFKTSS--VAKTSSTYSRQLHAYAAAMENPSDKSQLKKVLISELGLVVYTPSEF-------HTPLDMEGK-LKAAMTGGIKYVKIERDDPGFHQFLGEVIDVLKKPEAPSPKLATGRNFSS-CPYCNYLHQAQKSG 288
            +RLAPSDFAFL++ C RCFYLK H  L RP+  FPS+F  ID  MK   +G+RT ++ P MRPG FLC+  DPW++  PI  PG S    I GK+D L++FDD  TFGI+DFKTS+   + + ++Y RQLHAYA  ++N S   + K + IS+L L+VY P  F        +P D + + +   + G +KYV +ERDD  F +FL EV+D+L+ P AP        N++S CP+C+YL + Q SG
Sbjct:   69 FRLAPSDFAFLYDTCPRCFYLKSHKMLMRPKTFFPSVFNDIDNQMKEFFAGVRTQDVVPEMRPGVFLCDKSDPWLQSAPIDVPGHSSKVVISGKVDCLVQFDDDKTFGIVDFKTSNQDTSNSKTSYERQLHAYALCLQNLSGGKE-KSLKISDLALIVYQPQLFVGVRRKAASPSDPQRREIGGRLDGNLKYVPLERDDTKFMRFLSEVLDILELP-APXXXXXQSANYNSGCPFCSYLVEGQASG 312          
BLAST of Gvermi6874.t1 vs. uniprot
Match: A0A1F9ABN2_9DELT (PDDEXK_1 domain-containing protein n=1 Tax=Deltaproteobacteria bacterium RBG_13_52_11 TaxID=1797829 RepID=A0A1F9ABN2_9DELT)

HSP 1 Score: 182 bits (461), Expect = 4.180e-53
Identity = 101/242 (41.74%), Postives = 143/242 (59.09%), Query Frame = 0
Query:   50 MVEENYRLAPSDFAFLWEECKRCFYLKVHGALPRPRAPFPSIFTSIDLGMKRHMSGLRTNELFPGMRPGTFLCEDDDPWIECLPIIPPGQSHGAYIRGKIDALIRFDDGTFGIIDFKTSSVAKTSST--YSRQLHAYAAAMENPSDKSQLKKVLISELGLVVYTPSEFHTPLDMEGKLKAAMTGGIKYVKIERDDPGFHQFLGEVIDVLKKPEAPSPKLATGRNFSSCPYCNYLHQAQKSGL 289
            M + +++L PSDFAFLWEECKRCFYLKV     RP   FP IFT ID  MK +  G+RT E+ P +  G  +    +  +E  PI     S   +I+GK D +++FDDGT+G+IDFKT+  AK+     Y+RQLH+YA  +ENP+   +     IS+LGL+VY P E+   L  +   + A+ G I ++ I R+D GF  FL EV +VL  PE P+          +C +C Y   ++++GL
Sbjct:    1 MSKNHFKLTPSDFAFLWEECKRCFYLKVVCGFQRPFGAFPKIFTIIDGQMKNYYLGMRTEEISPALPNG--VVRYSEKGVESKPIYSSNSSSSCFIKGKFDTVLQFDDGTYGVIDFKTAE-AKSEHVPLYARQLHSYAHCLENPAP-GKFSLTPISKLGLLVYEPQEYGC-LSSD---RVALHGSITWINIPRNDDGFIAFLEEVFEVLNMPEPPAGS-------PTCVWCQYRDSSRRTGL 227          
BLAST of Gvermi6874.t1 vs. uniprot
Match: A0A2H0QU42_9BACT (PDDEXK_1 domain-containing protein n=1 Tax=Candidatus Zambryskibacteria bacterium CG10_big_fil_rev_8_21_14_0_10_42_12 TaxID=1975115 RepID=A0A2H0QU42_9BACT)

HSP 1 Score: 180 bits (457), Expect = 2.780e-52
Identity = 95/251 (37.85%), Postives = 144/251 (57.37%), Query Frame = 0
Query:   39 VPTLGRRKQVAMVEENYRLAPSDFAFLWEECKRCFYLKVHGALPRPRAPFPSIFTSIDLGMKRHMSGLRTNELFPGMRPGTFLCEDDDPWIECLPIIPPGQSHGAYIRGKIDALIRFDDGTFGIIDFKTSSV-AKTSSTYSRQLHAYAAAMENPSDKSQLKKVLISELGLVVYTPSEFHTPLDMEGKLK-AAMTGGIKYVKIERDDPGFHQFLGEVIDVLKKPEAPSPKLATGRNFSSCPYCNYLHQAQKS 287
            +P++       M  +N++L+PSDFAFLWEECKRCFYLKV     RPR+  P +FT ID  MK    G+RT E+  G+ PG  +C   + W+E +PI   G++   ++RGK D +++FDDG++G+IDFKT+   ++    Y+RQ HAYA A+ENP          +S LGL+V+ P ++      +GK       G + +++ ERD   F +FL +V+   + PE P        + S C +C Y  + + S
Sbjct:    7 IPSVRLGLGTKMKRKNWKLSPSDFAFLWEECKRCFYLKVARDFGRPRSIMPKVFTIIDSQMKEFYEGMRTEEIAEGVPPGVVMC--GEKWVESIPIQFDGRTSTCFVRGKFDTIVQFDDGSYGVIDFKTTQAKSEHIPLYARQPHAYAHALENPKI-GNFSVSPVSRLGLLVFEPKKY-----TQGKTGLVGFAGKVSWIEFERDAKSFKKFLEDVLXXXELPEPPP-------HSSVCDWCKYRKETRAS 242          
BLAST of Gvermi6874.t1 vs. uniprot
Match: M2XSI0_GALSU (PDDEXK_1 domain-containing protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XSI0_GALSU)

HSP 1 Score: 179 bits (453), Expect = 2.360e-51
Identity = 101/255 (39.61%), Postives = 144/255 (56.47%), Query Frame = 0
Query:   41 TLGRRKQVAMVEENYRLAPSDFAFLWEECKRCFYLKVHGALPRPRAPFPSIFTSIDLGMKRHMSGLRTNEL---FP--GMRPGTFLCEDDDPWIECLPIIPPGQSHGAYIRGKIDALIRFDDGTFGIIDFKTSSVA-KTSSTYSRQLHAYAAAMENPSDKSQLKKVLISELGLVVYTPSEFHTPLDM---EGKLKAAMTGGIKYVKIERDDPGFHQFLGEVIDVLKKPEAPSPKLATGRNFSSCPYCNYLHQAQK 286
            ++G   ++   +  + +APSD  FLWEEC RCFYLKVH    RPR PFPS+F +ID  MK+  SG RT+E    FP  G R  T L      WIE  P+          +RGKID+ ++ DDGT G++DFKTS +  + +  YSRQLHAYA ++ENP + +     ++S +GL+ + P  F         +  L+A+  G ++Y+ I R+D  F  FL +V+ +LK+ +AP     T      CP+C YL Q  K
Sbjct:   21 SVGTNNRMIYSDNTFSIAPSDLTFLWEECPRCFYLKVHRKSYRPRLPFPSVFGAIDQQMKQFFSGKRTDEFWQHFPNNGGRFAT-LPRSSAIWIESRPLKMAKYDAWIVLRGKIDSYLQMDDGTLGLVDFKTSQIGNRLAPIYSRQLHAYAWSLENPLETTGPLIGIVSNMGLITFHPQSFQVDASSFLSQKPLEASFGGRLEYLPIPREDDRFLDFLEQVVGLLKQEQAPVIDYQT-----QCPFCQYLIQQGK 269          
BLAST of Gvermi6874.t1 vs. uniprot
Match: A0A1Q7RC19_9BACT (PDDEXK_1 domain-containing protein n=4 Tax=unclassified Acidobacteria TaxID=305072 RepID=A0A1Q7RC19_9BACT)

HSP 1 Score: 177 bits (449), Expect = 2.650e-51
Identity = 99/241 (41.08%), Postives = 142/241 (58.92%), Query Frame = 0
Query:   50 MVEENYRLAPSDFAFLWEECKRCFYLKVHGALPRPRAPFPSIFTSIDLGMKRHMSGLRTNELFPGMRPGTFLCEDDDPWIECLPIIPPGQSHGAYIRGKIDALIRFDDGTFGIIDFKTSS-VAKTSSTYSRQLHAYAAAMENPS-DKSQLKKVLISELGLVVYTPSEFHTPLDMEGKLKAAMTGGIKYVKIERDDPGFHQFLGEVIDVLKKPEAPSPKLATGRNFSSCPYCNYLHQAQKSG 288
            M E  + L PSDFAFLWEECKRCF+LKV     RP+ P   IFT ID  M++H +G RT ++ P +  G    +  + W+E +P+  PG      IRG++D L+RFDDG+  +IDFKTS   A     Y RQLH+YA A+EN S +K  L+ V  + LGLVV+ P  F    D  G+  A + GG+ +++I+++D  F  FL +V++VL++   P+P         SC +C Y   ++  G
Sbjct:    1 MRETIWTLNPSDFAFLWEECKRCFWLKVTRDFRRPQIPMAKIFTVIDEEMRKHFAGRRTGDVLPALPSGVL--DTQEHWVESVPLPIPGYPARCVIRGRLDCLVRFDDGSAAVIDFKTSERKAAHIPLYGRQLHSYAVAIENASPNKLSLRPV--TRLGLVVFDPDRFEK--DAAGR--AQLFGGLTWIEIQKNDASFLAFLKDVLNVLQQSSPPAPG-------PSCAFCQYRQASRARG 226          
BLAST of Gvermi6874.t1 vs. uniprot
Match: R7QKI4_CHOCR (PDDEXK_1 domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QKI4_CHOCR)

HSP 1 Score: 171 bits (433), Expect = 1.540e-49
Identity = 83/148 (56.08%), Postives = 106/148 (71.62%), Query Frame = 0
Query:  148 KIDALIRFDDGTFGIIDFKTSSVAKTSSTYSRQLHAYAAAMENPSDKSQLKKVLISELGLVVYTPSEFHTPLDMEGKLKAAMTGGIKYVKIERDDPGFHQFLGEVIDVLKKPEAPSP-----KLATGRNFSSCPYCNYLHQAQKSGLL 290
            ++D L+RFDDGTFG+IDFKTS  AK+S TYSRQLHAYA A+ENPS +S+L +  +S++GLVVYT  +FHTP    G + AA+TG + YV++ RDD  F  FL EV+DVL  PEAP       K   G +FSSCPYC +LH A+  GL+
Sbjct:   29 QVDCLVRFDDGTFGVIDFKTSQAAKSSLTYSRQLHAYALAIENPSTQSELLQGTVSDMGLVVYTLKDFHTPATENGDISAALTGDLTYVQVPRDDKAFEGFLSEVLDVLILPEAPXXXXXLLKRKWGASFSSCPYCQFLHDAKMRGLI 176          
BLAST of Gvermi6874.t1 vs. uniprot
Match: A0A363T440_9CHLR (PDDEXK_1 domain-containing protein n=1 Tax=Anaerolineales bacterium TaxID=2073117 RepID=A0A363T440_9CHLR)

HSP 1 Score: 164 bits (415), Expect = 3.310e-46
Identity = 92/236 (38.98%), Postives = 134/236 (56.78%), Query Frame = 0
Query:   56 RLAPSDFAFLWEECKRCFYLK-VHGALPRPRAPFPSIFTSIDLGMKRHMSGLRTNELFPGMRPGTFLCEDDDPWIECLPIIPPGQSHGAYIRGKIDALIRFDDGTFGIIDFKTSSV-AKTSSTYSRQLHAYAAAMENPSDKSQLKKVLISELGLVVYTPSEFHTPLDMEGKLKAAMTGGIKYVKIERDDPGFHQFLGEVIDVLKKPEAPSPKLATGRNFSSCPYCNYLHQAQKSGL 289
            +L+PS+  FLW+EC RCFYLK +HG + RP APFP++F +ID  MK H +G    E+ P M  G  +    + W+E  PI  PG S   ++RGK DA++ F+DG++G++DFKTS   A     YSRQLHAYA A+E+P+ + +L    IS LGL++  P         E       T    +++I   + GF  F+ +V+ +L+ PE P P          C YC Y   A++ G+
Sbjct:    7 KLSPSELTFLWDECPRCFYLKHIHG-INRPAAPFPAVFGAIDRLMKAHFAGHPAAEIDPSMPAG--IISVSEKWVESKPISLPGHSLSVFLRGKTDAMLSFEDGSYGVVDFKTSEPKASQIPFYSRQLHAYAYALEHPAPE-KLWLSPISRLGLLIEAPHATFNETSEEINFHFTST----WLEIPYREAGFLSFIDQVVTLLELPEPPPPN-------EKCAYCQYRQHARQHGM 227          
BLAST of Gvermi6874.t1 vs. uniprot
Match: A0A7C3B6K0_9CHLR (PD-(D/E)XK nuclease family protein n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A7C3B6K0_9CHLR)

HSP 1 Score: 160 bits (405), Expect = 8.960e-45
Identity = 94/234 (40.17%), Postives = 129/234 (55.13%), Query Frame = 0
Query:   57 LAPSDFAFLWEECKRCFYLKVHGALPRPRAPFPSIFTSIDLGMKRHMSGLRTNELFPGMRPGTFLCEDDDPWIECLPIIPPGQSHGAYIRGKIDALIRFDDGTFGIIDFKTSSVA-KTSSTYSRQLHAYAAAMENPSDKSQLKKVLISELGLVVYTPSEFHTPLDMEGKLKAAMTGGIKYVKIERDDPGFHQFLGEVIDVLKKPEAPSPKLATGRNFSSCPYCNYLHQAQKSGL 289
            L+PSD  FLW  C+RCFYLKV     RPR P P IFT IDL MK    G + +E+   +  G         W++  PI  PG S   YIRG  D +IR  DG++G+IDFKTS V  K  + YSRQL AYA ++E+P+   +L    I++LGL+V+ PSEF    D     +    G + + +   D+  F  FL +V  VL++PEAP            C +C+Y  +A+ +GL
Sbjct:    4 LSPSDLTFLWNGCQRCFYLKVMHDFRRPRTPMPRIFTDIDLKMKDFFFGKQLSEISAALPEGEVYLAGK--WVQSQPITLPGHSLQCYIRGIFDTVIRLSDGSYGVIDFKTSEVKEKNVAFYSRQLRAYAYSLEHPA-AGKLGLSPITKLGLLVFEPSEFLQKGD-----QLQYIGRMAWQECPMDEGAFLAFLDKVYTVLERPEAPEAN-------EDCQFCSYRDKARNTGL 222          
The following BLAST results are available for this feature:
BLAST of Gvermi6874.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IUE5_9FLOR1.160e-12370.89PDDEXK_1 domain-containing protein n=1 Tax=Gracila... [more]
A0A7S1TB95_9RHOD1.550e-6748.28Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A5J4YTQ4_PORPP4.880e-6646.34PDDEXK_1 domain-containing protein n=1 Tax=Porphyr... [more]
A0A1F9ABN2_9DELT4.180e-5341.74PDDEXK_1 domain-containing protein n=1 Tax=Deltapr... [more]
A0A2H0QU42_9BACT2.780e-5237.85PDDEXK_1 domain-containing protein n=1 Tax=Candida... [more]
M2XSI0_GALSU2.360e-5139.61PDDEXK_1 domain-containing protein n=1 Tax=Galdier... [more]
A0A1Q7RC19_9BACT2.650e-5141.08PDDEXK_1 domain-containing protein n=4 Tax=unclass... [more]
R7QKI4_CHOCR1.540e-4956.08PDDEXK_1 domain-containing protein n=1 Tax=Chondru... [more]
A0A363T440_9CHLR3.310e-4638.98PDDEXK_1 domain-containing protein n=1 Tax=Anaerol... [more]
A0A7C3B6K0_9CHLR8.960e-4540.17PD-(D/E)XK nuclease family protein n=1 Tax=Anaerol... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011604PD-(D/E)XK endonuclease-like domain superfamilyGENE3D3.90.320.10coord: 42..283
e-value: 5.2E-12
score: 48.0
IPR038726PD-(D/E)XK endonuclease-like domain, AddAB-typePFAMPF12705PDDEXK_1coord: 143..281
e-value: 8.1E-8
score: 32.5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 12..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..11
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 18..293
IPR011335Restriction endonuclease type II-likeSUPERFAMILY52980Restriction endonuclease-likecoord: 141..210

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24229contigScGOVlb_24229:327731..328721 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6874.t1Gvermi6874.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24229 327731..328721 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6874.t1 ID=Gvermi6874.t1|Name=Gvermi6874.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=294bp
MVRLLAPGFLLPRTNHAARLFRTPLRLRQSQVCALKRNVPTLGRRKQVAM
VEENYRLAPSDFAFLWEECKRCFYLKVHGALPRPRAPFPSIFTSIDLGMK
RHMSGLRTNELFPGMRPGTFLCEDDDPWIECLPIIPPGQSHGAYIRGKID
ALIRFDDGTFGIIDFKTSSVAKTSSTYSRQLHAYAAAMENPSDKSQLKKV
LISELGLVVYTPSEFHTPLDMEGKLKAAMTGGIKYVKIERDDPGFHQFLG
EVIDVLKKPEAPSPKLATGRNFSSCPYCNYLHQAQKSGLLLVP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011604PDDEXK-like_dom_sf
IPR038726PDDEXK_AddAB-type
IPR011335Restrct_endonuc-II-like