Gvermi6863.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6863.t1
Unique NameGvermi6863.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length226
Homology
BLAST of Gvermi6863.t1 vs. uniprot
Match: A0A2V3IUC9_9FLOR (ESCRT-related protein CHMP1A n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUC9_9FLOR)

HSP 1 Score: 347 bits (891), Expect = 2.020e-119
Identity = 201/225 (89.33%), Postives = 212/225 (94.22%), Query Frame = 0
Query:    1 MGLFSRKAPXXXXXXXXXXXXXTLQEIVFKMRFTSKTIGRQATKSQRQIDIEKRKAKEAMAKNNIAGARIHAENAIRNHNEHLSYLKLQSQLEAVAAKLQAQDVRQQVSQSMVAVTRNLDQALGSMDATQIGYTMEQFITQSEDLDLQTKYMDSAIGESTSSSTPQSQVNGLLQQIADENNLDIGDRLNGYSAPIGQPTALPAASKTQDNDLMARLNALQGGARP 225
            MGLFSRKAP XXXXXXXXXXXXTLQ+IVFKMRFTSKTIGRQA KSQ+QID+EKRKAKEAMAKNNIAGARIHAENAIRNHNEHLSYLKLQSQLEAVAAKLQAQ+VRQ VSQSM AVT NLDQAL SMDATQIGYTMEQFI QSEDLDLQTKYMDSAIGESTSSSTPQSQVN LLQQIADENNLD+GDRL+G++APIGQPTA+ +  K QD DLMARL+ALQGGARP
Sbjct:    1 MGLFSRKAPPXXXXXXXXXXXXTLQDIVFKMRFTSKTIGRQALKSQKQIDVEKRKAKEAMAKNNIAGARIHAENAIRNHNEHLSYLKLQSQLEAVAAKLQAQEVRQLVSQSMTAVTANLDQALNSMDATQIGYTMEQFIKQSEDLDLQTKYMDSAIGESTSSSTPQSQVNNLLQQIADENNLDVGDRLSGFNAPIGQPTAV-SGQKVQDTDLMARLDALQGGARP 224          
BLAST of Gvermi6863.t1 vs. uniprot
Match: A0A1X6P0R5_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P0R5_PORUM)

HSP 1 Score: 166 bits (421), Expect = 5.490e-48
Identity = 113/229 (49.34%), Postives = 151/229 (65.94%), Query Frame = 0
Query:    1 MGLFSRKAPXXXXXXXXXXXXXTLQEIVFKMRFTSKTIGRQATKSQRQIDIEKRKAKEAMAKNNIAGARIHAENAIRNHNEHLSYLKLQSQLEAVAAKLQAQDVRQQVSQSMVAVTRNLDQALGSMDATQIGYTMEQFITQSEDLDLQTKYMDSAIGESTSSSTPQSQVNGLLQQIADENNLDIGDRLNGYSAP---IGQPTALPAAS-KTQDNDLMARLNALQGGARP 225
            MGLF +   XXXXXXXXXXXXX++++ +F M+FT+KT+GR ATKS   I  EKR+ K A+ K N  GARI+AENAIR H+  L+YL+LQS+LEAV++KL+       V+  M  VT +L  AL SMD   I  TM+ F  Q EDLDL  K+++ +IGEST+ STP ++V+GLL+Q+A E+ L + D L+    P   +G  + +  AS      DL AR  AL GG RP
Sbjct:    1 MGLFKKXXXXXXXXXXXXXXXXSMEDTIFNMKFTAKTLGRLATKSNASIATEKRRLKTALEKGNTDGARIYAENAIRAHHTSLNYLRLQSRLEAVSSKLEGHQQMAAVTADMTGVTASLGAALSSMDVNAIARTMDTFEKQFEDLDLSVKFVEGSIGESTALSTPAAEVDGLLEQVAAEHGLKVADELSQPMVPRYGVGSASGVSEASGSAAGTDLEARFAALAGGGRP 229          
BLAST of Gvermi6863.t1 vs. uniprot
Match: A0A5J4YP67_PORPP (Charged multivesicular body protein 1a n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YP67_PORPP)

HSP 1 Score: 156 bits (394), Expect = 5.320e-44
Identity = 111/225 (49.33%), Postives = 148/225 (65.78%), Query Frame = 0
Query:    1 MGLFSR---KAPXXXXXXXXXXXXXTLQEIVFKMRFTSKTIGRQATKSQRQIDIEKRKAKEAMAKNNIAGARIHAENAIRNHNEHLSYLKLQSQLEAVAAKLQAQDVRQQVSQSMVAVTRNLDQALGSMDATQIGYTMEQFITQSEDLDLQTKYMDSAIGESTSSSTPQSQVNGLLQQIADENNLDIGDRL---NGYSAPIGQPTALPAASKTQDNDLMARLNAL 219
            MGLF +   +APXXXXXXXXXX   +L++ VF MRFT+K + R + K+++ ++ EK+K ++AMAK N+ GARI AENAIR  N+ L+YLKL S+L+AVA+KL  Q   QQV+  M  VT  L  AL +MD  +I  TM+ F  Q EDLD+  KYMD AI ++T+ STPQ+QV+ LL+Q+   N L+  + L     Y  P  Q TA   AS  +D  L ARL AL
Sbjct:    1 MGLFGKSKKEAPXXXXXXXXXXPAPSLEDTVFNMRFTAKQLARMSQKAEKDVEKEKKKCRDAMAKQNVEGARIFAENAIRQENQALTYLKLASRLDAVASKLDGQMKMQQVTGQMSDVTLALGGALEAMDVEKIARTMDTFEKQFEDLDMTAKYMDGAISDTTAMSTPQNQVDDLLKQVGTANALEYQNMLFDGTKYGTP-AQATA--QASSAEDTSLEARLQAL 222          
BLAST of Gvermi6863.t1 vs. uniprot
Match: A0A7S0G4U7_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G4U7_9RHOD)

HSP 1 Score: 154 bits (389), Expect = 2.840e-43
Identity = 84/184 (45.65%), Postives = 126/184 (68.48%), Query Frame = 0
Query:   24 LQEIVFKMRFTSKTIGRQATKSQRQIDIEKRKAKEAMAKNNIAGARIHAENAIRNHNEHLSYLKLQSQLEAVAAKLQAQDVRQQVSQSMVAVTRNLDQALGSMDATQIGYTMEQFITQSEDLDLQTKYMDSAIGESTSSSTPQSQVNGLLQQIADENNLDIGDRLNGYSAPIGQPTALPAASKT 207
            L E +F M+FT+K +GR A K+   ++ EK+K K+A+ ++N+ GA+IHAENA+RN  + +SY++LQS+L+AV +KL+A      V+ SM  V+  LD+AL +MD  +I   M+ F  Q E+LDL  +YMDSAIGES +SS PQ++VN LLQQ+ +E+NL++ + + G   P G  T  P+   T
Sbjct:   28 LSETLFNMKFTAKQMGRLAKKAHSSMEAEKKKCKKAIEESNVEGAKIHAENAVRNEKQEISYMRLQSRLDAVVSKLEAHTKMMTVTASMGDVSYKLDEALQTMDINKITAVMDTFEKQFENLDLNAQYMDSAIGESVASSVPQNEVNTLLQQVGEEHNLEVSEIIGGPKIP-GTKTGQPSKETT 210          
BLAST of Gvermi6863.t1 vs. uniprot
Match: A0A0G4IWF5_PLABS (Uncharacterized protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IWF5_PLABS)

HSP 1 Score: 150 bits (379), Expect = 4.260e-42
Identity = 84/199 (42.21%), Postives = 129/199 (64.82%), Query Frame = 0
Query:   23 TLQEIVFKMRFTSKTIGRQATKSQRQIDIEKRKAKEAMAKNNIAGARIHAENAIRNHNEHLSYLKLQSQLEAVAAKLQAQDVRQQVSQSMVAVTRNLDQALGSMDATQIGYTMEQFITQSEDLDLQTKYMDSAIGESTSSSTPQSQVNGLLQQIADENNLDIGDRLNGYSAPIGQPTALPAASKTQDNDLMARLNALQG 221
            +L + VF +RF SK + RQ+ K++++    K K K+AM K N+ GARI+A+NAIR  NE L+YL+L S+++AVAA+       Q ++++M  V +N+D+A+ SM+   I  TM++F  Q EDLDL+ +YMD+AIG S++ +TP  QV  L+ Q+ADE+NL+    LN       +P  +    + +D+DL  RL  LQG
Sbjct:    2 SLDDYVFNLRFMSKQLARQSVKAEKEEKASKLKCKKAMEKGNMDGARIYAQNAIRQKNEALNYLRLSSRIDAVAARCNTAAKTQTLTRAMGGVVKNMDKAMASMNLEAISSTMDKFEQQFEDLDLRAEYMDNAIGSSSALTTPDDQVQSLMHQVADEHNLEFQSNLNAVGVGKAKPQQV---EEKEDDDLEERLKRLQG 197          
BLAST of Gvermi6863.t1 vs. uniprot
Match: M2VZX7_GALSU (Charged multivesicular body protein 1 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2VZX7_GALSU)

HSP 1 Score: 149 bits (376), Expect = 1.520e-41
Identity = 85/196 (43.37%), Postives = 129/196 (65.82%), Query Frame = 0
Query:   24 LQEIVFKMRFTSKTIGRQATKSQRQIDIEKRKAKEAMAKNNIAGARIHAENAIRNHNEHLSYLKLQSQLEAVAAKLQAQDVRQQVSQSMVAVTRNLDQALGSMDATQIGYTMEQFITQSEDLDLQTKYMDSAIGESTSSSTPQSQVNGLLQQIADENNLDIGDRLNGYSAPIGQPTALPAASKTQDNDLMARLNAL 219
            L++ + ++R   K +GR A K Q+ I +EKRK KEA+ K N  GARI AENAIRN  + L+Y +LQS+++AV +KL+A    Q  + S+  +T +LD+AL SM+  +I   M++F +Q ED+DL+ +Y+D AI ++T+ +TP  QV+ LLQ++ADEN L++ D L+G   PI Q +        + +DL AR  AL
Sbjct:    8 LEDQILELRLAEKQLGRAAKKCQKNIQVEKRKCKEALEKGNHDGARIFAENAIRNEKQSLAYFRLQSRVDAVVSKLEAHHKMQTTTNSIRDITVSLDKALQSMNIEKISQVMDKFESQFEDIDLRAQYVDGAISQTTALATPSDQVDALLQKVADENGLELADTLDGL-IPINQLSGEKQKQLQRPDDLEARFAAL 202          
BLAST of Gvermi6863.t1 vs. uniprot
Match: A0A066VGY5_TILAU (Uncharacterized protein n=1 Tax=Tilletiaria anomala (strain ATCC 24038 / CBS 436.72 / UBC 951) TaxID=1037660 RepID=A0A066VGY5_TILAU)

HSP 1 Score: 145 bits (367), Expect = 3.420e-40
Identity = 84/201 (41.79%), Postives = 137/201 (68.16%), Query Frame = 0
Query:   24 LQEIVFKMRFTSKTIGRQATKSQRQIDIEKRKAKEAMAKNNIAGARIHAENAIRNHNEHLSYLKLQSQLEAVAAKLQAQDVRQQVSQSMVAVTRNLDQALGSMDATQIGYTMEQFITQSEDLDLQTKYMDSAIGESTSSSTPQSQVNGLLQQIADENNLDIGDRLNGYSAPIGQPTALPAASKT----QDNDLMARLNALQ 220
            L++ +F+++FT+K++ RQA K+ +   +EK K K+A+A+ N  GARI+A NAIR  +E L+ L+L S+++AVA++++     +QV+ SM +V + +D+A+ SM+  +I   M++F TQ ED+D+QT YM+  +G +T+S TPQ QV+ LLQQ+ADEN +++  +L G +A  G+   L  A K     +DN L  RL AL+
Sbjct:    4 LEKSLFQLKFTAKSLQRQAKKANKDEGLEKAKLKKALAQGNTEGARIYASNAIRKKSEGLNLLRLSSRIDAVASRVETAVTMRQVTGSMASVVKGMDRAMESMNLERISLVMDKFETQFEDMDVQTSYMEGTMGATTASVTPQDQVDLLLQQVADENGIELNHQL-GEAALEGKVAELQQAEKAPEPKEDNKLAERLRALR 203          
BLAST of Gvermi6863.t1 vs. uniprot
Match: A0A507DT99_9FUNG (Uncharacterized protein n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507DT99_9FUNG)

HSP 1 Score: 150 bits (379), Expect = 4.950e-40
Identity = 84/200 (42.00%), Postives = 133/200 (66.50%), Query Frame = 0
Query:   23 TLQEIVFKMRFTSKTIGRQATKSQRQIDIEKRKAKEAMAKNNIAGARIHAENAIRNHNEHLSYLKLQSQLEAVAAKLQAQDVRQQVSQSMVAVTRNLDQALGSMDATQIGYTMEQFITQSEDLDLQTKYMDSAIGESTSSSTPQSQVNGLLQQIADENNLDIGDRLNGYSAPIGQPTALPAASKTQDNDLMARLNALQGG 222
            T+ + +F ++FT+KT+ RQA KS +    EK K K+A+ + N+ GARI+A NAIR  NE L+ L+L S+++ VAA++Q     ++VSQSM  V + +++A+ SM+  QI   M++F +Q EDLD+QT+YM+S++G+ST+ STPQ QV  L+QQ+ADEN L++   + G +       A  A  + + ++L  RL  L+ G
Sbjct:  189 TMDKHLFNLKFTAKTLQRQAKKSAKDEAAEKAKLKKAIQQGNMEGARIYASNAIRKKNESLNLLRLGSRIDGVAARVQTAVTMRKVSQSMAGVVKGMEKAMSSMNLEQISMVMDKFESQFEDLDVQTQYMESSMGQSTAMSTPQDQVEDLMQQVADENGLELQMEMPGAATGTLNAAAGTATVEKEQDELTERLAKLRNG 388          
BLAST of Gvermi6863.t1 vs. uniprot
Match: A0A7S3BQC4_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3BQC4_9VIRI)

HSP 1 Score: 147 bits (372), Expect = 1.300e-39
Identity = 86/203 (42.36%), Postives = 135/203 (66.50%), Query Frame = 0
Query:   24 LQEIVFKMRFTSKTIGRQATKSQRQIDIEKRKAKEAMAKNNIAGARIHAENAIRNHNEHLSYLKLQSQLEAVAAKLQAQDVRQQVSQSMVAVTRNLDQALGSMDATQIGYTMEQFITQSEDLDLQTKYMDSAIGESTSSSTPQSQVNGLLQQIADENNLDIGDRLNGYSAPIGQPTAL---PAASKT---QDNDLMARLNALQ 220
            L E +F+++FT+K + RQA K+++    EK K K+A+ K N+ GARIHA+NAIR  +E L+YL+L S+L+AVA++L  Q     V ++M  + + LD+AL + +  QI  TM+ F  Q E+LD++T++M++A+  +TS STP+ QVN L+Q++ADE+ LD+   L+  +A  G P A    PAA++      +DL  RL AL+
Sbjct:  120 LMEQIFQLKFTTKQLSRQAKKAEKDEXAEKNKVKKAIEKGNVDGARIHAQNAIRKKSEQLNYLRLASRLDAVASRLDTQAKMNMVGKTMANIVKTLDRALKAQNLEQISTTMDSFEKQFENLDVRTEFMETAMSNTTSMSTPEDQVNLLMQEVADEHQLDLAATLSNEAAIPGAPVAAAAQPAAAQPVAEPADDLSGRLAALR 322          
BLAST of Gvermi6863.t1 vs. uniprot
Match: A0A5M6C5U6_9TREE (Uncharacterized protein n=18 Tax=Cryptococcaceae TaxID=1884633 RepID=A0A5M6C5U6_9TREE)

HSP 1 Score: 143 bits (361), Expect = 2.430e-39
Identity = 81/197 (41.12%), Postives = 132/197 (67.01%), Query Frame = 0
Query:   24 LQEIVFKMRFTSKTIGRQATKSQRQIDIEKRKAKEAMAKNNIAGARIHAENAIRNHNEHLSYLKLQSQLEAVAAKLQAQDVRQQVSQSMVAVTRNLDQALGSMDATQIGYTMEQFITQSEDLDLQTKYMDSAIGESTSSSTPQSQVNGLLQQIADENNLDIGDRLNGYSAPIGQPTALPAASKTQDNDLMARLNALQ 220
            L++ +F+++FT+K++ RQA K+ +    EK K K+A+AK N  GARI+A+NAIR   E L+ L+L S+++AVA++++     +QV+ SM +V + +D+A+ SM+  +I   M++F  Q  DLD+QT YM+S + ++T+ +TPQ QV+ L+QQ+ADE  L++   L     P+ +PT   AA K +D  L  RL AL+
Sbjct:    4 LEKSLFQLKFTAKSLQRQAKKANKDEISEKNKLKQALAKGNTDGARIYAQNAIRKKTEGLNLLRLASRIDAVASRVETAVTMRQVTNSMGSVVKGMDKAMESMNLERISLVMDKFENQFADLDVQTSYMESTMSDTTALTTPQDQVDSLMQQVADEAGLEVQHGLGEAKVPVKEPTVGEAA-KEEDGKLADRLRALR 199          
The following BLAST results are available for this feature:
BLAST of Gvermi6863.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IUC9_9FLOR2.020e-11989.33ESCRT-related protein CHMP1A n=1 Tax=Gracilariopsi... [more]
A0A1X6P0R5_PORUM5.490e-4849.34Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A5J4YP67_PORPP5.320e-4449.33Charged multivesicular body protein 1a n=1 Tax=Por... [more]
A0A7S0G4U7_9RHOD2.840e-4345.65Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A0G4IWF5_PLABS4.260e-4242.21Uncharacterized protein n=1 Tax=Plasmodiophora bra... [more]
M2VZX7_GALSU1.520e-4143.37Charged multivesicular body protein 1 n=1 Tax=Gald... [more]
A0A066VGY5_TILAU3.420e-4041.79Uncharacterized protein n=1 Tax=Tilletiaria anomal... [more]
A0A507DT99_9FUNG4.950e-4042.00Uncharacterized protein n=1 Tax=Powellomyces hirtu... [more]
A0A7S3BQC4_9VIRI1.300e-3942.36Hypothetical protein n=1 Tax=Prasinoderma singular... [more]
A0A5M6C5U6_9TREE2.430e-3941.12Uncharacterized protein n=18 Tax=Cryptococcaceae T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005024Snf7 familyPFAMPF03357Snf7coord: 30..184
e-value: 1.6E-6
score: 27.9
IPR005024Snf7 familyPANTHERPTHR10476CHARGED MULTIVESICULAR BODY PROTEINcoord: 26..220
NoneNo IPR availableGENE3D6.10.140.1230coord: 15..187
e-value: 9.3E-30
score: 105.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..25
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21
NoneNo IPR availablePANTHERPTHR10476:SF2CHARGED MULTIVESICULAR BODY PROTEIN 1Bcoord: 26..220

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24229contigScGOVlb_24229:236143..236820 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6863.t1Gvermi6863.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24229 236143..236820 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6863.t1 ID=Gvermi6863.t1|Name=Gvermi6863.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=226bp
MGLFSRKAPPPPPPVQRAPPPPTLQEIVFKMRFTSKTIGRQATKSQRQID
IEKRKAKEAMAKNNIAGARIHAENAIRNHNEHLSYLKLQSQLEAVAAKLQ
AQDVRQQVSQSMVAVTRNLDQALGSMDATQIGYTMEQFITQSEDLDLQTK
YMDSAIGESTSSSTPQSQVNGLLQQIADENNLDIGDRLNGYSAPIGQPTA
LPAASKTQDNDLMARLNALQGGARP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005024Snf7_fam