Gvermi6856.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gvermi6856.t1
Unique Name	Gvermi6856.t1
Type	polypeptide
Organism	Gracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length	398

Homology

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BLAST of Gvermi6856.t1 vs. uniprot
Match: A0A2V3IUD9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IUD9_9FLOR)

HSP 1 Score: 478 bits (1230), Expect = 1.250e-165
Identity = 269/398 (67.59%), Postives = 313/398 (78.64%), Query Frame = 0

Query:    1 MSDISEDEY-EHSALPRTKEAAAAARDIIDLSDDDSEEERKTTRDRRPAVRENEDEPQXXXXXXXXXXLDNQGSPKREFGLDPNNVHDLDPDADPNADDASLSQDRERTPDIEDKYERVCGHRSDGQRKVDILHFPPSISLHTSLASDLKDLPELENPILFRLKPEMKKAGQSDAQTLLKFIQANPNPFALKRILDTNAHLITWSDGSKTITIGNEQFLLIDDIIASKHYVFRRGDRIQTFEAEVGSIRRVQPSTTGSSAAKMALAKAQKRARNANSITTGRTMMRCMHNGGELEEEKAKQESLKRQRERLRMEAKRRQQRERAMRPARGLTTEMLESNEEESGEDEKMRRIEERVGESRLMRAKRAAAPRIEVSVKRRKVGARRILSDDDDGDDESE 397
            MSD S+DE+ + +   RT+EAAAA RDI DLSDD+SEEERK ++D RP+                    D++     E G    +  ++ P  +P  ++    +DRE TPDI+DKYER        Q  VDILHFPPS+S H SL +DL DLP  ENPILFRLKPEM++ GQSDAQTLL+F++ NP+PFAL++IL+TNAHLITWSDGSKTITIGNEQFLLIDD+IASKHYVFRRGDRIQTFEAEVG IRRVQPSTTGS+ AK+ALAKAQKRAR++    TGRTMMRCM +GGELEEEKAKQESL+R RERL+MEA+RRQ RER MRP+RGLTTE+LESN+E+SGEDEKMRRIEERVGESRLMRAKRAA PRIEVSVKRRK G RR+LSD DDGDDE E
Sbjct:    1 MSDNSDDEFPDTTTRQRTEEAAAAVRDIADLSDDESEEERKPSQDVRPSP-------------PSPVPDDDEPGRSDEDGFKHEDEDEITPKNEPVVEEDGQREDREETPDIDDKYERYAVRHGQTQHNVDILHFPPSVSFHMSLTTDLADLPVEENPILFRLKPEMRRKGQSDAQTLLEFVKKNPDPFALRKILETNAHLITWSDGSKTITIGNEQFLLIDDVIASKHYVFRRGDRIQTFEAEVGGIRRVQPSTTGSATAKIALAKAQKRARSSGFGPTGRTMMRCMDDGGELEEEKAKQESLRRHRERLKMEARRRQARERNMRPSRGLTTELLESNDEDSGEDEKMRRIEERVGESRLMRAKRAAPPRIEVSVKRRKAGGRRVLSDSDDGDDEIE 385

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BLAST of Gvermi6856.t1 vs. uniprot
Match: R7QK63_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QK63_CHOCR)

HSP 1 Score: 182 bits (462), Expect = 1.880e-51
Identity = 115/250 (46.00%), Postives = 169/250 (67.60%), Query Frame = 0

Query:  131 ILHFPPSISLHTSLASDLKDLPELENPILFRLKPEMKKAGQSDAQTLLKFIQANPN-PFALKRILDTNAHLITWSDGSKTITIGNEQFLLIDDIIASKHYVFRRGDRIQTFEAEVGSIRRVQPSTTGSSAAKMALAKAQKRARNANSITTGRTMMRCMHNGGELEEEKAKQESLKRQRERLRMEAKRRQQRERAMRPARGLTTEMLE-SNEEESGEDEKMRRIEERVGESRLMRAKRAAAPR-IEVSVKR 377
            +LHFPP+I+L  ++ + L  LP+ +NPIL+RL P   +  +S   T+L+ ++ N N P AL ++L++NA +ITWSDGSKT++IG +QFL+I D +AS+H++ R+G  + T E+ V ++ RVQPS+T  + AK+A+A+A  RA  A+    GRTM+RCM + GE +E +AK E+ +RQR            RER MRP R LT   LE  ++++SGED+  RR+ ER+   RLMRAKRA  PR ++VS KR
Sbjct:    1 MLHFPPNITLIPAVTTKLNSLPQEQNPILYRL-PSGVQGDRSAHATVLQLVKENKNDPLALSQVLESNARVITWSDGSKTLSIGAQQFLMIADTVASRHFILRKGTDVHTCESRVKNVMRVQPSSTSDATAKVAMARAAMRA--ASKRPEGRTMLRCMDDTGEQQEAQAKVENNRRQRXXXXXXXXXXXARERHMRPRRPLTVASLERESDDDSGEDQ-ARRMAERLDAERLMRAKRAPPPRTMDVSAKR 246

The following BLAST results are available for this feature:

BLAST of Gvermi6856.t1 vs. uniprot

BLAST of Gvermi6856.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A2V3IUD9_9FLOR	1.250e-165	67.59	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]
R7QK63_CHOCR	1.880e-51	46.00	Uncharacterized protein n=1 Tax=Chondrus crispus T...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 293..320
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 22..56
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 292..353
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..15
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 292..327
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..112
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 80..112
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 377..397
IPR007149	Leo1-like protein	PFAM	PF04004	Leo1	coord: 191..279 e-value: 2.4E-8 score: 34.0

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
ScGOVlb_24229	contig	ScGOVlb_24229:213819..215012 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gvermi6856.t1	Gvermi6856.t1	Gracilaria vermiculophylla HapMaleFtJ_2017 male	mRNA	ScGOVlb_24229 213819..215012 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gvermi6856.t1 ID=Gvermi6856.t1|Name=Gvermi6856.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=398bp
MSDISEDEYEHSALPRTKEAAAAARDIIDLSDDDSEEERKTTRDRRPAVR
ENEDEPQRSDEEPEQSDLDNQGSPKREFGLDPNNVHDLDPDADPNADDAS
LSQDRERTPDIEDKYERVCGHRSDGQRKVDILHFPPSISLHTSLASDLKD
LPELENPILFRLKPEMKKAGQSDAQTLLKFIQANPNPFALKRILDTNAHL
ITWSDGSKTITIGNEQFLLIDDIIASKHYVFRRGDRIQTFEAEVGSIRRV
QPSTTGSSAAKMALAKAQKRARNANSITTGRTMMRCMHNGGELEEEKAKQ
ESLKRQRERLRMEAKRRQQRERAMRPARGLTTEMLESNEEESGEDEKMRR
IEERVGESRLMRAKRAAAPRIEVSVKRRKVGARRILSDDDDGDDESE*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR007149	Leo1