Gvermi6844.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6844.t1
Unique NameGvermi6844.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length420
Homology
BLAST of Gvermi6844.t1 vs. uniprot
Match: R7Q5V7_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q5V7_CHOCR)

HSP 1 Score: 373 bits (957), Expect = 9.530e-124
Identity = 206/397 (51.89%), Postives = 263/397 (66.25%), Query Frame = 0
Query:   60 ILWMNDDGRSGGALCPVCRQHN----QFLTWRVLYLSDRAAALYTPHSRAPTPRRVQAAADAVSKSTSKSVNRRPCS---------TTRTRRKQQTR-----PVGAYVMA-PNKVPHVGHIISMAYVTASLRTFD----TSVATPDGQHIRLRTAGTKARQSCPVQLLLWSDRRSKGPLIAQRVEEVAWYARQ---IADPS-----------LQSEQWLPTPLVSVSTMKPSSWRDVHASNGRSVSLPAGWEPTAQQWILFDIDDLQGL--EGRTSLVASKVVLVARRNQELSGRCLVVHTGPRGVHLWAELREVREQPKEWFRKEEVRVWYAELGYRLLSACHRAGTFGGLVDMSSCAAGRFARRPGWRLLKDGTLFRSRVVMHVPGPVKNRKPRM 417
            +LWMN DG +GGA+CPVC +      + +TWRV YL D +AAL TP  R  +P RVQ A  A  K T     +             T   +R++        PVG  V+   N++  VG +I MAYVTASLR       T   + DG   RLRT GT ARQ+CP+Q+LLWS+RRSKGP  +++VEEVAW+ARQ   +AD             ++SE+WLPTPLVSVS MKPS+WRD+ +S GR +S+PA WE + Q W+LFDIDD+  L  EG  +   +K+ L  RR+QE+SGRCL++ TGP G+H+WAELREVR++P +WF+KEE R WYA+LG RLL ACHRAG   G VDMSSC+AGRFARRP WRLL+DGTLFRS VV++VP  V+ R PR+
Sbjct:    1 MLWMNADGITGGAMCPVCLESGTGAGRQMTWRVHYLPDNSAALCTPQRRIRSPARVQEAI-AEYKRTQMGTRQEKGDEDVPSVAEMTDGAKRREGKEGEANGPVGGCVLRNKNRISRVGEVIDMAYVTASLRIATNPSTTGEVSLDGN--RLRTVGTMARQTCPMQVLLWSERRSKGPTSSRKVEEVAWFARQSVSLADDGSDAGSRKDGEIVESEEWLPTPLVSVSAMKPSAWRDITSSTGRLISVPAAWEASVQAWVLFDIDDIGRLDKEGVVTKSGNKLALTIRRDQEMSGRCLIMQTGPAGLHVWAELREVRQEPSKWFKKEEARTWYADLGSRLLHACHRAGARRGKVDMSSCSAGRFARRPDWRLLEDGTLFRSHVVVYVPSRVRTRTPRL 394          
BLAST of Gvermi6844.t1 vs. uniprot
Match: A0A5J4YUR8_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YUR8_PORPP)

HSP 1 Score: 254 bits (648), Expect = 1.250e-73
Identity = 174/460 (37.83%), Postives = 233/460 (50.65%), Query Frame = 0
Query:   25 AVLTLSRMPLPGVRTVAARCPRRASHAHRDANPSLILWMNDDGRSGGALCPVCRQHNQF---LTWRVLYLSDRAAALYTPHSR---------APTPRRVQAAADAVSKSTSKSV----NRRPCSTTRTRRKQQTRPVGAYVMAP------NKVPHVGHIISMA-----YVTASLRTFDTSVATPDGQHIRLRTAGTKARQSCPVQLLLWSDRRSKGPLIAQRVEEVAWYA------------RQIADP--SLQSEQWLPTPLVSVSTMKPSSWR--------------DVHASNGRSVS--------LPAGWEPTAQQWILFDIDDLQGLEG-----RTSLVASKVVLVARRNQELSGRCLVVHTGPRGVHLWAELREVREQPKEWFRKEEVRVWYAELGYRLLSACHRAGTFGGLVDMSSCAAGRFARRPGWRLLKDGTLFRSRVVMHVPGPVKNRKPR 416
            A++TL ++P  G RTV  RC   A H H D NPSLI+WMN DG++GGA+C VCRQ N+    LT+ V Y   R A L+ P  R         A    R++ +     +S S SV    +  P +            +    +A       +K P  GH++  A     Y+  +LRT      + DG+    RT G+  + S  + +LL S+RRS         +EV W A            R  A+P    QS+  LPT ++SVS MKPS+WR                  SN +S           PA W+P AQ+W+LFD+DD++G E      R + VAS ++ V RR+ ELSGRC+V+ TGP G  LWAELRE R  P++WF ++ VR WY     RLL A   AG   G VDMS+CAAGRF RRP WR+L  G ++RSRVV      V +R  R
Sbjct:  299 AIVTLPQLPSAGQRTVHVRCINAAGHRHGDRNPSLIMWMNKDGKTGGAMCAVCRQKNEPSRPLTFAVQYKDQRQAWLFEPGQRHSARAQNRKAKHETRLEKSQRRDQRSASSSVQAVVDNHPAADEHENDSSGDEKLSGAGIAQVDGRTKSKSPVGGHVMKAAQVDGMYIGCALRT-----RSVDGECKLHRTIGSALKGSL-IDILLSSERRSSSERQELHAQEVQWLAVREEKKDNATNVRAAAEPYEHAQSDLKLPTRILSVSVMKPSAWRALVRKPRLPSTASTSTTGSNSKSPDGASPRVPRAPASWKPVAQEWVLFDLDDIRGFEDPTQKERIARVASGMLAVIRRDVELSGRCVVIQTGPCGFQLWAELREPRRSPRDWFAQDSVRSWYRATALRLLQAARAAGASEGHVDMSACAAGRFGRRPSWRILASGHVYRSRVVAVAAQRVASRSVR 752          
BLAST of Gvermi6844.t1 vs. uniprot
Match: A0A7S2ZIP1_9RHOD (Hypothetical protein n=5 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZIP1_9RHOD)

HSP 1 Score: 241 bits (614), Expect = 6.240e-70
Identity = 155/412 (37.62%), Postives = 216/412 (52.43%), Query Frame = 0
Query:   10 PSVPEPXXXXXAHLEAVLTLSRMPLPG-VRTVAARCPRRASHAHRDANPSLILWMNDDGRSGGALCPVCRQHNQFLTWRVLYLSDRAAALYTPHSRAPTPRRVQAAADAVSKSTSKSVNRRPCSTTRTRRKQQTRPVGAYVMAPNKV--PHV-GHIISMAYVTASLRTFDTSVATPDGQHIRLRTAGTKARQSCPVQLLLWSDRRSKGPLIAQRVEEVAWYARQIADPSLQSEQWLPTPLVSVSTMKPSSWRDVHASNGRSVSLPAGWEPTAQQWILFDIDDLQGL-EGRTSLVASKVVLVARRNQELSGRCLVVHTGPRGVHLWAELREVREQPKEWFRKEEVRVWYAELGYRLLSACHRAGTFGGLVDMSSCAAGRFARRPGWRLLKDGTLFRSRVVMHVPGPVKNRKPR 416
            PS PE         E  + L R+P  G  R++A +CP   +H + D +PSLILWMN DGR+GG  C VC   +   T   ++ S  +A LY    +    ++     D   K  +K  N    +       Q   PVG YVM  +K+  P+  GH     ++ A L+    ++ T DG   + RT G       P+++L  +DR S+      + +  +W  +Q  D   + E  L T ++S S M  SSW+  +  +G+ V LP GWEP AQ WILFD+DDLQ L E   +   +KV    +R+  LSGR  VV TGP G+ +W ELREVREQP++W  +   R WY  LG R+L +   AG  GG VD +  AAGRF RRPGWR+L+ G +FRSR+         NR+PR
Sbjct:  211 PSPPE----SYGEPELTIELPRLPTAGNKRSIATKCPNVEAHRNGDRHPSLILWMNADGRTGGGQCQVCCGADGKPTRYSVWYSGNSAVLYRWREKVQKSKKY--VLDIAVKPKTKGGN---TAGEEGVADQDGAPVGGYVMKADKLKEPNAEGH-----HLCALLK----NLYTRDGSRTKFRTIG-HLNSKDPIEILEIADRMSRSDKALTQAKLCSWMTKQALDSGEECEDLLYTRMLSTSGMVVSSWKQTNGKSGQPVFLPNGWEPLAQSWILFDLDDLQMLCEAVVNNACNKVNAAVQRDVNLSGRVAVVQTGPNGLQVWCELREVREQPRKWVAEHNTREWYKGLGRRILKSARSAGARGGFVDFACYAAGRFGRRPGWRVLQSGDIFRSRLAYARDERGPNREPR 603          
BLAST of Gvermi6844.t1 vs. uniprot
Match: A0A7S1TK17_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TK17_9RHOD)

HSP 1 Score: 240 bits (612), Expect = 1.280e-68
Identity = 163/465 (35.05%), Postives = 235/465 (50.54%), Query Frame = 0
Query:   14 EPXXXXXAHLEAVLTLSRMPLPGVRTVAARCPRRASHAHRDANPSLILWMNDDGRSGGALCPVCRQHNQ---FLTWRVLYLSDRAAALYTPHSRAPTPRRVQAAADAVSKSTSKSVNRRPCST------------------TRTRRKQQTRPV-------GAYVMAPNK-VPHVGHIISMA-------------------------YVTASLRTFDTSVATPDGQHIRLRTAGTKARQSCPVQLLLWSDRRSKGPLIAQRVEEVAWYARQIAD--------PSLQSEQWLPTPLVSVSTMKPSSWRDVHASNGRSVSLPAGWEPTAQQWILFDIDDLQGLEGRTSLVASKVVLVARRNQELSGRCLVVHTGPRGVHLWAELREVREQPKEWFRKEEVRVWYAELGYRLLSACHRAGTFGGLVDMSSCAAGRFARRPGWRLLKDGTLFRSRVVMHVPGPVKNRKPR 416
            EP     A   A++ LSRMP+ G RTVA RC   ++H+  D +PS+ILWM+ +GRSGGA C VC+  +     L++ V +  ++ A LY    R     R Q   + +S S S S +    S                   +  R   ++R V       G  + AP K  P  G ++  A                         YV ASL+      ++P+     +RT G  A    P++L++ SDR S+        +    YAR + D            ++  +P  ++SVS M+ +S+R++  S      +PA W P  Q+W+LFD D+LQ  +    +VA   V V RRNQELSG+C+V+ TGP+G H+WAELRE R  P  WF  + VR WY + G RLL+A  R+G  GG +D+SSCAAGRF RRPGWR+L DG+ FRS+++      V++R PR
Sbjct:  265 EPSDCVAAAPTAIINLSRMPVAGGRTVAVRCVNPSAHSANDRHPSMILWMHRNGRSGGAKCMVCQSRSDPASNLSFHVEF-REQCAWLYDRTPRDGAGDRTQLYGE-LSTSMSDSEHTGSASIFADAHEATVQQLQGERLKSHLRGSNKSRSVRKAASTQGKILAAPRKDQPVGGRVVRRAEDEQEGALSVRLKRKDSGAKRAGGSYVGASLKEGTNYKSSPEAASALIRTVGL-ALSGDPLELMVQSDRLSQSAGRVSHAKSCEGYARAMLDFGAGKGNTSKHGTKYMIPVSVLSVSRMRATSFREMGGS-----MIPASWAPHIQEWVLFDFDELQHTDDVAKIVAKGFVSVVRRNQELSGKCIVIRTGPQGFHVWAELREPRRSPMYWFNDKSVRKWYEQTGSRLLAAGRRSGAAGGFLDLSSCAAGRFGRRPGWRILPDGSAFRSKLMAIAGSRVRSRVPR 721          
BLAST of Gvermi6844.t1 vs. uniprot
Match: A0A7S1TIK2_9RHOD (Hypothetical protein n=2 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TIK2_9RHOD)

HSP 1 Score: 236 bits (602), Expect = 1.480e-67
Identity = 159/399 (39.85%), Postives = 218/399 (54.64%), Query Frame = 0
Query:   24 EAVLTLSRMPLPGVRTVAARCPRRASHAHRDANPSLILWMNDDGRSGGALCPVCRQ---HNQFLTWRVLYLSDRAAALYTPHSRAPTPRRVQAAADAVSKSTSKSVNRRPCSTTRTRRKQQTRPVGAYVMAPNKVPHVGHIISMAYVTASLRTFDTSVATPDGQHIRLRTAGTKARQSCPVQLLLWSDRRSKGPLIAQRVEEVAWYARQIADPSLQSEQWLPTPLVSVSTMKPSSWRDVHA-SNGRSVSLPAGWEPTAQQWILFDIDDLQGLE--GRTSLVASKVVLVARRNQELSGRCLVVHTGPRGVHLWAELREVREQPKEWFRKEEVRVWYAELGYRLLSACHRAGTFGGLVDMSSCAAGRFARRPGWRLLKDGTLFRSRVVMHVPGPVKNRKPR 416
            E V+ L R+P PG R+V+  CP+R  H H D +PSL+LW+N+D  +GGA+C VC+     +Q LT+   +   RA  L  P       R  Q       K  S + NR P   T + R   T+PVG   M P    H  H  S  +V A LR    +    DG  IRLR+ G  A Q  P+ LL  ++RRS  P  A+  +  +       D   ++   LP  L+SVSTM P+ +++V    + + V++P  WEP  Q+WIL D+DD+  L+  G     A K++ + RR+ ELSG+  V+ TGP G+ +WAELRE R  P++WFR  E   WY +LG R+L      G   G++D SSCA  RF RRPGWRL+KDG+LFRSR+V      V  R PR
Sbjct:  294 EHVVNLRRLPSPG-RSVSGTCPQRDQHRHGDRSPSLVLWINEDQCTGGAMCMVCQDPVHQHQRLTFAARFDGKRAY-LKPPIDTIGNIRPRQRG-----KKRSPAPNRSP--KTNSLRSDPTQPVGGCAMHPMDDNH--H--SYRHVGAVLR----NQLYEDGP-IRLRSTG-HAVQGSPLDLLQKAERRSLTPSAARLAQATSSRVLVDGDSYDEASGNLPALLLSVSTMCPAGFKEVLGYRSSKVVAIPHSWEPAVQEWILLDLDDVNRLDLPGVVECAADKIIRIVRRDAELSGKVAVIQTGPSGLQVWAELRETRLTPRQWFRSPETLEWYLDLGRRVLRGVRSCGARRGILDESSCAPARFGRRPGWRLMKDGSLFRSRLVRFDDTRVAIRTPR 673          
BLAST of Gvermi6844.t1 vs. uniprot
Match: A0A7S0G4M7_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G4M7_9RHOD)

HSP 1 Score: 229 bits (583), Expect = 1.050e-66
Identity = 140/393 (35.62%), Postives = 207/393 (52.67%), Query Frame = 0
Query:   27 LTLSRMPLPG-VRTVAARCPRRASHAHRDANPSLILWMNDDGRSGGALCPVCRQHNQFLTWRVLYLSDRAAALYTPHSRAPTPRRVQAAADAVSKSTSKSVNRRPCSTTRTRRKQQTRPVGAYVMAPNKVPHVGHIISMAYVTASLRTFDTSVATPDGQHIRLRTAGTKARQSCPVQLLLWSDRRSKGPLIAQRVEEVAWYARQIADPSLQSEQWLPTPLVSVSTMKPSSWRDVHASNGRSVSLPAGWEPTAQQWILFDIDDLQGL-EGRTSLVASKVVLVARRNQELSGRCLVVHTGPRGVHLWAELREVREQPKEWFRKEEVRVWYAELGYRLLSACHRAGTFGGLVDMSSCAAGRFARRPGWRLLKDGTLFRSRVVMHVPGPVKNRKPRM 417
            + L R+P  G  R++AARCP   +H + D +PSLILWMN DGR+GG  C VC   +   T   ++ S  +A LY    +    +R     D   K   K   R P    +   +Q   PVG YVM  +K+     +    +V A L+    ++   DG   + RT G       P+++L  +D  S+      + +   W  +Q  +   + E  L T ++S S M  S+W+  +  +G+ + LP GW+P AQ+WILFD+DDLQ L E   +   ++V  V + +  LSGR  VV TGP G+ +W ELREVRE+P++W  +   R WY  LG ++L +   AG  GG VD++  A GRF RRPGWR+L+ G +FR R+         +R PR+
Sbjct:   90 IDLPRLPTAGNTRSIAARCPNVEAHRNGDRHPSLILWMNADGRTGGGQCQVCCGSDGKPTRYSVWFSGNSALLYERREKVHATKRY--VLDIAMKPKEKG-GRNPVGEEKVL-EQDASPVGGYVMGADKLEEP--MAEGQHVCALLK----NLYRADGSRTKFRTIG-HLNSKDPIEILQIADSLSRSDKTLTQAKMCGWMTKQAINSGEECEDLLYTKMLSTSGMVVSTWKQTNGKSGQPLFLPNGWQPLAQRWILFDLDDLQMLCEAVVNSACNEVDAVVQSDVNLSGRVAVVQTGPNGLQVWCELREVREKPRKWVAEHSTREWYKGLGQKILKSARSAGARGGSVDLACYAPGRFGRRPGWRVLESGDIFRCRLFYARDERSPDRDPRL 471          
BLAST of Gvermi6844.t1 vs. uniprot
Match: A0A1X6NMF4_PORUM (Uncharacterized protein (Fragment) n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NMF4_PORUM)

HSP 1 Score: 133 bits (335), Expect = 4.970e-30
Identity = 64/111 (57.66%), Postives = 82/111 (73.87%), Query Frame = 0
Query:  306 ARRNQELSGRCLVVHTGPRGVHLWAELREVREQPKEWFRKEEVRVWYAELGYRLLSACHRAGTFGGLVDMSSCAAGRFARRPGWRLLKDGTLFRSRVVMHVPGPVKNRKPR 416
            ARR+ +LSGR +VV TGP G+H+WAELRE R  P+ W+    VRVWYA LG R+L+A  RAG  GG VDMSS AAGR+ARRPGWR+L++G +FR+ +V      V+ R+PR
Sbjct: 1005 ARRDPQLSGRVMVVRTGPAGLHVWAELREPRGDPRGWWADPAVRVWYAALGGRVLAAVRRAGAVGGWVDMSSAAAGRWARRPGWRVLEEGGVFRASLVGVATARVRGRRPR 1115          
The following BLAST results are available for this feature:
BLAST of Gvermi6844.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
R7Q5V7_CHOCR9.530e-12451.89Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A5J4YUR8_PORPP1.250e-7337.83Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
A0A7S2ZIP1_9RHOD6.240e-7037.62Hypothetical protein n=5 Tax=Rhodosorus marinus Ta... [more]
A0A7S1TK17_9RHOD1.280e-6835.05Hypothetical protein n=1 Tax=Erythrolobus australi... [more]
A0A7S1TIK2_9RHOD1.480e-6739.85Hypothetical protein n=2 Tax=Compsopogon caeruleus... [more]
A0A7S0G4M7_9RHOD1.050e-6635.62Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A1X6NMF4_PORUM4.970e-3057.66Uncharacterized protein (Fragment) n=1 Tax=Porphyr... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..13
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 14..419
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..9
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 10..13

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_24229contigScGOVlb_24229:83699..84958 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6844.t1Gvermi6844.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_24229 83699..84958 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6844.t1 ID=Gvermi6844.t1|Name=Gvermi6844.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=420bp
MLLVAASFTPSVPEPQPEPHAHLEAVLTLSRMPLPGVRTVAARCPRRASH
AHRDANPSLILWMNDDGRSGGALCPVCRQHNQFLTWRVLYLSDRAAALYT
PHSRAPTPRRVQAAADAVSKSTSKSVNRRPCSTTRTRRKQQTRPVGAYVM
APNKVPHVGHIISMAYVTASLRTFDTSVATPDGQHIRLRTAGTKARQSCP
VQLLLWSDRRSKGPLIAQRVEEVAWYARQIADPSLQSEQWLPTPLVSVST
MKPSSWRDVHASNGRSVSLPAGWEPTAQQWILFDIDDLQGLEGRTSLVAS
KVVLVARRNQELSGRCLVVHTGPRGVHLWAELREVREQPKEWFRKEEVRV
WYAELGYRLLSACHRAGTFGGLVDMSSCAAGRFARRPGWRLLKDGTLFRS
RVVMHVPGPVKNRKPRMVM*
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