Gvermi6821.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6821.t1
Unique NameGvermi6821.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length308
Homology
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BLAST of Gvermi6821.t1 vs. uniprot
Match: A0A2V3J3K8_9FLOR (RNA_ligase domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3K8_9FLOR)

HSP 1 Score: 127 bits (318), Expect = 6.430e-29
Identity = 87/231 (37.66%), Postives = 127/231 (54.98%), Query Frame = 0 
Query:   84 ITIASASECDSLGPRYTSQLLRYLSESPSFLPMFLTI--PRKQGV------ILFWPHAQYARARVGLQRVQFTVSANTS-RSAMESRQQSS--HFSLNVDCFLQLARAAATFSPQYASVVDDVYQAADLVEQTYPSPSVHVRRQIAIIRSVAVARLDSRDHRVLSQANALVALDPTSSAAYLHRAQSLYAAGQFWFAVLDVWYAVLKQGDQQFNKARAVSVL-----HMPY 298
            I++AS SEC  +G R   +LLR LS + S  P+ L    PR   V      ++FWP AQ AR+++ L R  F +  +    S  E+       H + +V    Q AR A   + Q+ SVV+D+     L+ +   +    VRRQ+A IR V +AR +S++  ++ +ANALV +DPT  A+YLHRA +L  AGQ W AVLD+WYAVL          R+V++L     H+P+
Sbjct:   47 ISLASPSECRGIGTRACLRLLRTLSTTVSQPPLLLAASPPRLHSVAQLHYIVIFWPTAQLARSKISLPRTVFHIKLDAGPASDYEAVPHLGFLHHAASVHLLQQYARGAVDMARQHPSVVEDILYVTHLLSKQDSTRL--VRRQLAEIRFVLLARQNSKNQDIICEANALVQVDPTYPASYLHRAHALCCAGQHWHAVLDIWYAVLALNQHPKLDPRSVTLLVRCIPHVPF 275
The following BLAST results are available for this feature:
BLAST of Gvermi6821.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J3K8_9FLOR6.430e-2937.66RNA_ligase domain-containing protein n=1 Tax=Graci... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_88contigScGOVlb_88:2424901..2425889 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6821.t1Gvermi6821.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_88 2424901..2425889 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6821.t1 ID=Gvermi6821.t1|Name=Gvermi6821.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=308bp
MPGQQQTAVRHHHHGHQYWQTQTGISSSDFYSVPRMASRTPKLSFSLSGG
AVIATIPSSDPYHGQHTALDTAPQHPESTTSISITIASASECDSLGPRYT
SQLLRYLSESPSFLPMFLTIPRKQGVILFWPHAQYARARVGLQRVQFTVS
ANTSRSAMESRQQSSHFSLNVDCFLQLARAAATFSPQYASVVDDVYQAAD
LVEQTYPSPSVHVRRQIAIIRSVAVARLDSRDHRVLSQANALVALDPTSS
AAYLHRAQSLYAAGQFWFAVLDVWYAVLKQGDQQFNKARAVSVLHMPYSS
GELSSSI*
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