Gvermi6820.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male
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Overview
Homology
BLAST of Gvermi6820.t1 vs. uniprot
Match: A0A2V3J3L9_9FLOR (Protein PIN-LIKES 3 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3L9_9FLOR) HSP 1 Score: 455 bits (1170), Expect = 5.370e-156 Identity = 248/410 (60.49%), Postives = 313/410 (76.34%), Query Frame = 0
Query: 4 SSSHILGSSLSGSVELLTLCFAGAYLVHSAILDRKLTRRLSKACKDMFIPCLVFGSILHTARSAIHTLLSKNDSFSALQEIWVPVFLAFMVLGISAVFAIPITRLVAFDKQEAVRRAIFVCLALGNANVLPLLVMQSLCDTFPPLMEVPHCYERSMGYASLFLTIINIISWTTLYQYLRASRDNVVDRPAAEEAPLVAE-------NCCTPEDEADG-LKESISRALKSPIFMSMIAAVFLAFISPVANALLNHDGALRPVMLSINILGNVVVPVNAIVVGAEFYLSMV--EDDNREYDYQEDEMFGNRVFAVILIWRLIVLPALARFIYSSLGLASQVHNHLLGIFGLIEFNNPTANTTVMMMSLVRNRLKRAGRQLGRDVVRTVFIQFLCTPIFLTINTAAALQLQYS 403
SSS IL SSLSGSVELLTLC AGA LVH+ + D +T +LS+A K++FIP LVFGSILHTA SAI TL++ DS ALQ+IWVPV LAF+V G++A+FA PIT+L+A KQ+AV+RA+F CL LGNANV+PLLVMQSLCDTFPPLM PHCY++SMGYASLFLT+INIISWT LYQ+LR S+D+ D EEAPL+++ N DE + ++I R L S IF++++AA+ +A + P+ NA L+ DG LRP +LSINILGNVVVPVN+++VGAE Y S+ D++R Y+++E FG+ F VIL WRL+ P +AR +Y LGL S++ + LLGIFGL+EFNNPTANTTVM++S+V RL R G QL DV +TVF QFL TPIFLT+NTAAAL LQY+
Sbjct: 3 SSSRILQSSLSGSVELLTLCAAGALLVHTQVFDADVTTQLSRAMKNLFIPALVFGSILHTAHSAIETLITSRDSI-ALQQIWVPVALAFLVFGMAAIFAYPITKLIASGKQQAVQRAVFACLVLGNANVMPLLVMQSLCDTFPPLMRTPHCYDKSMGYASLFLTVINIISWTVLYQFLRDSKDS--DHFREEEAPLLSQTGFRSSINHPMDLDEPRAPIIDAIKRVLCSHIFLAVVAALAIAIVYPLGNAFLDDDGVLRPFLLSINILGNVVVPVNSLIVGAELYNSLYGCRDEDRYIKYKDEE-FGSSTFLVILFWRLVAFPWIARILYVLLGLDSKLGDPLLGIFGLVEFNNPTANTTVMLISVVSTRLPRIGDQLRYDVAKTVFWQFLATPIFLTLNTAAALHLQYA 408
BLAST of Gvermi6820.t1 vs. uniprot
Match: A0A2V3ISQ9_9FLOR (Protein PIN-LIKES 3 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISQ9_9FLOR) HSP 1 Score: 384 bits (986), Expect = 5.130e-128 Identity = 213/413 (51.57%), Postives = 280/413 (67.80%), Query Frame = 0
Query: 3 SSSSHILGSSLSGSVELLTLCFAGAYLVHSAILDRKLTRRLSKACKDMFIPCLVFGSILHTARSAIHTLLSKNDSFSALQEIWVPVFLAFMVLGISAVFAIPITRLVAFDKQEAVRRAIFVCLALGNANVLPLLVMQSLCDTFPPLMEVPHCYERSMGYASLFLTIINIISWTTLYQYLRASRDNVVDRPAAEEA---PLVAENCCTPEDEAD-------GLKESISRALKSPIFMSMIAAVFLAFISPVANALLNHDGALRPVMLSINILGNVVVPVNAIVVGAEFYLSMVE--DDNREYDYQEDEMFGNRVFAVILIWRLIVLPALARFIYSSLGLASQVHNHLLGIFGLIEFNNPTANTTVMMMSLVRNRLKRAGRQLGRDVVRTVFIQFLCTPIFLTINTAAALQLQYS 403
S+++ ILGSS+ GSVELLTL GA LVH + + +T LS+A +FIP LVFGSIL T SA+ ++ N SALQEIWVPV LA ++ I+A+ A P+TRL+A KQEAV+RAIF CL LGNAN +PLLVMQSLCDTF PL + CY +SMGYASLFLT++NI+SWT L+QYL + D+ + E A P A P D D +KE+I RAL SP F+++++++ A I + +A L+ G LRP +LSINI+G +VVPV+ ++VG+E Y S+ +D + E FG + F VIL R+++LP +AR IY + + +VHNHLLGIFGL+EFN PTAN TV+M+S+ L R GRQL +DV + VF QFL TPIFLT+NTAAAL LQ+S
Sbjct: 2 STAAQILGSSIGGSVELLTLSSVGALLVHIGVFQQAVTSALSRAVYLIFIPALVFGSILETTHSALKSVRETNGDPSALQEIWVPVVLALIIYVITAIIAFPVTRLIARSKQEAVKRAIFACLILGNANTMPLLVMQSLCDTFLPLQQGGQCYPKSMGYASLFLTVVNIVSWTALFQYLMYAPDSSLAASDEEHALLQPRPAPQHIRPLDHEDVDVSRPDPVKEAIMRALVSPPFIAVVSSMTCAIIPGLGDAFLHEQGLLRPFLLSINIVGGIVVPVSCMIVGSELYRSLASSSEDEELVKRRPQEQFGTQTFVVILFVRMVLLPLVAREIYRAFNFSERVHNHLLGIFGLVEFNVPTANNTVIMISIAAESLPRIGRQLRQDVSKAVFWQFLATPIFLTLNTAAALNLQFS 414
BLAST of Gvermi6820.t1 vs. uniprot
Match: R7QA56_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QA56_CHOCR) HSP 1 Score: 71.2 bits (173), Expect = 1.700e-11 Identity = 39/102 (38.24%), Postives = 60/102 (58.82%), Query Frame = 0
Query: 138 MQSLCDTFPPLMEVPHCYERSMGYASLFLTIINIISWTTLYQYLRASRDNVVDRPAAEEAPLVAENCCTPEDEADGLK--ESISRALKSPIFMSMIAAVFLA 237
MQSLCD+F PL P C RS G+ASL++T++ + +WT +++YL A+ D E P+V + TP G+ E+I +A+ SP +S+I + LA
Sbjct: 1 MQSLCDSFAPLNHDPKCVVRSTGFASLYITVVTLFTWTIIFEYLSAAPDATGSNDM-ESHPIVGTS--TPRASRTGMSLGENIRKAMGSPPSLSVILGIGLA 99
BLAST of Gvermi6820.t1 vs. uniprot
Match: A0A1X6NVP0_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NVP0_PORUM) HSP 1 Score: 69.7 bits (169), Expect = 1.630e-9 Identity = 85/371 (22.91%), Postives = 149/371 (40.16%), Query Frame = 0
Query: 43 LSKACKDMFIPCLVFGSILHTARSAIHTLLSKNDSFSALQEIWVPVFLAFMVLGISAVFAIPITRLVAFDKQEAVRRAIFVCLALGNANVLPLLVMQSLCDTFPPLMEVPHCYERSMGYASLFLTIINIISWTTLYQYLR-ASRDNVVDRP---------AAEEAPLVAENCCTPEDEADGLKESISRALKSPIFMSMIAAVFLAFISPVANALLNHDGALRPVMLSINILGNVVVPVNAIVVGAEFYLSMVEDDNREYDYQEDEMFGNRVFAVILIWRLIVLPA---LARFIYSSLGLA--SQVHNHLLGIFGLIEFNNPTANTTVMMMSLVRNRLKRAGRQLGRDVVRTVFIQFLCTPIFLTINTAAAL 398
+S+ +F+PCL+F SI+ T +A + ++ W V L + +AV R ++ RRA V GN+ LP+L+ S+CD + PL+ C R+ GY SL+L + + WT +YL A+ D + C S +L +P F++++AA+ + I L+ L + L++ +LG + V AV+ + R++++P L + ++GL S+V +L + ++ F PTAN ++M + AG + V +F Q+L P+F++ TA AL
Sbjct: 1 MSRMIVSLFLPCLLFISIVETLYAAAQSPVTSTTPVLLAMPAWAIVIL----IECAAVGTWVSRRWLSPTLSRPDRRACVVACVFGNSGQLPILLAGSVCDNYGPLVGDAGCKARATGYCSLYLLVWSSTLWTLGNRYLAGAAGDGXXXXXXXXXXXGPWGPPRGRWLLGACLAALPALPAAVRSTLGSLLTPPFLAIVAALCFSTIPGAGALLVGRSSVLHSLALTMELLGG-------------------------------RLDARSVLAVV-VARMLIMPVVGTLTLHLVLAVGLMDRSKVDPLMLTVMAMMAFV-PTANNALIMAQVAG-----AGDE---AVALVIFWQYLVAPVFVSGWTALAL 326 The following BLAST results are available for this feature:
BLAST of Gvermi6820.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 4
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gvermi6820.t1 ID=Gvermi6820.t1|Name=Gvermi6820.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=407bpback to top |