Gvermi6805.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6805.t1
Unique NameGvermi6805.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length90
Homology
BLAST of Gvermi6805.t1 vs. uniprot
Match: A0A2V3J3L2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3L2_9FLOR)

HSP 1 Score: 119 bits (297), Expect = 3.300e-33
Identity = 60/79 (75.95%), Postives = 65/79 (82.28%), Query Frame = 0
Query:    1 MASGHAGRQWLEALKFSVYVVTPIAATVYLGTGAYPYLERIIRNTSYIVYPPEGESPPT-----STNEIKRAKEERRLK 74
            MASGHA RQWLEALKFSVYVVTPIAATVYLGTGAYPYLER+I NTSYIVYPPEGE+PP      S +E KR +E  R +
Sbjct:    1 MASGHAARQWLEALKFSVYVVTPIAATVYLGTGAYPYLERMIHNTSYIVYPPEGEAPPNLHGKCSESEKKREQESNRTR 79          
BLAST of Gvermi6805.t1 vs. uniprot
Match: A0A1X6NRP5_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NRP5_PORUM)

HSP 1 Score: 78.2 bits (191), Expect = 7.810e-17
Identity = 38/65 (58.46%), Postives = 47/65 (72.31%), Query Frame = 0
Query:    8 RQWLEALKFSVYVVTPIAATVYLGTGAYPYLERIIRNTSYIVYPPEGESPPTSTNEIKRAKEERR 72
            R+ LE  KFSVYV+ PI A+ + G+GAYPYLERII+  SY+VYPPEG +PP   NE+ R  E  R
Sbjct:   21 RRRLEGFKFSVYVLLPIGASYFFGSGAYPYLERIIQQRSYVVYPPEGPAPP-KPNEMSRLVERER 84          
BLAST of Gvermi6805.t1 vs. uniprot
Match: A0A176VMF4_MARPO (Uncharacterized protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176VMF4_MARPO)

HSP 1 Score: 52.4 bits (124), Expect = 4.000e-7
Identity = 30/63 (47.62%), Postives = 36/63 (57.14%), Query Frame = 0
Query:    1 MASGHAGRQWLEALKFSVYVVTPIAATVYLGTGAYPY----LERIIRNTSYIVYPPEGESPPT 59
            M++  A +  LE  KF  Y+  PI     L   A+ Y    LERIIRN SY+VYPPEG  PPT
Sbjct:    1 MSAVGAKKGVLEVFKFGCYISIPI-----LMMSAFAYDPQNLERIIRNRSYVVYPPEGPRPPT 58          
BLAST of Gvermi6805.t1 vs. uniprot
Match: A0A061SH86_9CHLO (Uncharacterized protein n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061SH86_9CHLO)

HSP 1 Score: 51.2 bits (121), Expect = 1.110e-6
Identity = 26/55 (47.27%), Postives = 33/55 (60.00%), Query Frame = 0
Query:    5 HAGRQWLEALKFSVYVVTPIAATVYLGTGAYPYLERIIRNTSYIVYPPEGESPPT 59
            + G + LEA KF  Y+  PI  T +   G+   LE II+N SY+VYPP G  PPT
Sbjct:    5 YGGGRKLEAFKFFCYLSIPIVMT-WAVAGSPTNLEAIIKNRSYVVYPPAGPKPPT 58          
BLAST of Gvermi6805.t1 vs. uniprot
Match: A9U242_PHYPA (Predicted protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9U242_PHYPA)

HSP 1 Score: 50.1 bits (118), Expect = 3.380e-6
Identity = 24/49 (48.98%), Postives = 29/49 (59.18%), Query Frame = 0
Query:   11 LEALKFSVYVVTPIAATVYLGTGAYPYLERIIRNTSYIVYPPEGESPPT 59
            LE  KF  Y+  PI   +Y        LE+IIRN SY+VYPPEG  PP+
Sbjct:   11 LEVFKFGTYIAIPIVM-MYAFANNSDNLEKIIRNRSYVVYPPEGPRPPS 58          
BLAST of Gvermi6805.t1 vs. uniprot
Match: A0A443NR25_9MAGN (Sporulation-specific 71 n=1 Tax=Cinnamomum micranthum f. kanehirae TaxID=337451 RepID=A0A443NR25_9MAGN)

HSP 1 Score: 50.1 bits (118), Expect = 3.540e-6
Identity = 27/72 (37.50%), Postives = 42/72 (58.33%), Query Frame = 0
Query:    1 MASGHAGRQWLEALKFSVYVVTPIAATVYLGTGAYPYLERIIRNTSYIVYPPEGESPPTSTNEIKRAKEERR 72
            M+S    +  LE  KF++YV  PI   +Y       +L++++RN SY+VYPPEG  PP+     + A+E R+
Sbjct:    1 MSSLGTSKGILEIAKFALYVSVPITL-MYSFAHNSEFLQKVVRNRSYVVYPPEGPRPPSPEELREMAREMRK 71          
The following BLAST results are available for this feature:
BLAST of Gvermi6805.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A2V3J3L2_9FLOR3.300e-3375.95Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A1X6NRP5_PORUM7.810e-1758.46Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A176VMF4_MARPO4.000e-747.62Uncharacterized protein n=2 Tax=Marchantia polymor... [more]
A0A061SH86_9CHLO1.110e-647.27Uncharacterized protein n=1 Tax=Tetraselmis sp. GS... [more]
A9U242_PHYPA3.380e-648.98Predicted protein n=1 Tax=Physcomitrium patens Tax... [more]
A0A443NR25_9MAGN3.540e-637.50Sporulation-specific 71 n=1 Tax=Cinnamomum micrant... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018625Protein Pet100PFAMPF09803Pet100coord: 9..79
e-value: 2.0E-7
score: 31.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 62..89
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 52..89
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 39..89
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..15
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 16..38
NoneNo IPR availableTMHMMTMhelixcoord: 13..35

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_88contigScGOVlb_88:2344839..2345181 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6805.t1Gvermi6805.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_88 2344839..2345181 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6805.t1 ID=Gvermi6805.t1|Name=Gvermi6805.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=90bp
MASGHAGRQWLEALKFSVYVVTPIAATVYLGTGAYPYLERIIRNTSYIVY
PPEGESPPTSTNEIKRAKEERRLKLQRQRAELSMHEKDD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018625Pet100