Gvermi6784.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6784.t1
Unique NameGvermi6784.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length106
Homology
BLAST of Gvermi6784.t1 vs. uniprot
Match: A0A2V3IXM0_9FLOR (Protein disulfide-isomerase LQY1, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXM0_9FLOR)

HSP 1 Score: 136 bits (342), Expect = 1.360e-39
Identity = 83/105 (79.05%), Postives = 98/105 (93.33%), Query Frame = 0
Query:    1 MIDQNAVAIVATMVAGIGGGIALVAWTETQGTRTKQRQNTQPCTECGGQTTTVCNVCNGSSKDPLNDARXXXXXXXXXXXXXXXXXXXGIQPRFLDRLSPEDFMD 105
            MI+Q+ +AI+ATM+AG+GGGIALVAWTE+QG RT+ R+NTQPC EC G+TTTVCNVCNGS +DPL+D++XXXXXXXXXXXXXXXXXX GIQPRFLDRLSP+DFMD
Sbjct:    1 MIEQSTIAIIATMLAGMGGGIALVAWTESQGKRTELRENTQPCAECQGETTTVCNVCNGSKQDPLDDSKXXXXXXXXXXXXXXXXXXSGIQPRFLDRLSPDDFMD 105          
BLAST of Gvermi6784.t1 vs. uniprot
Match: M2XWY2_GALSU (Chaperone protein / DnaJ-related protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XWY2_GALSU)

HSP 1 Score: 78.2 bits (191), Expect = 3.900e-16
Identity = 57/94 (60.64%), Postives = 65/94 (69.15%), Query Frame = 0
Query:   12 TMVAGIGGGIALVAWTETQGTRTKQRQNTQPCTECGGQTTTVCNVCNGSSKDPLNDARXXXXXXXXXXXXXXXXXXXGIQPRFLDRLSPEDFMD 105
            T   G+  GIA + WTE QG R  QR+N QPC  C GQ    C  C GS K+P  ++  XXXXXXXXXXXXXXXXXX IQPR+LDR SPEDF+D
Sbjct:   59 TAALGLTAGIAFLVWTEKQGVRGSQRENLQPCVVCNGQKRLECIRCKGSGKNPTEESELXXXXXXXXXXXXXXXXXXXIQPRYLDRYSPEDFLD 152          
BLAST of Gvermi6784.t1 vs. uniprot
Match: A0A7S3U1S3_9SPIT (Hypothetical protein (Fragment) n=2 Tax=Choreotrichia TaxID=141411 RepID=A0A7S3U1S3_9SPIT)

HSP 1 Score: 61.2 bits (147), Expect = 3.170e-9
Identity = 42/149 (28.19%), Postives = 58/149 (38.93%), Query Frame = 0
Query:    2 IDQNAVAIVATMVAGIGGGIALVAWTETQGTRTKQRQNTQPCTECGGQTTTVCNVCNGSSKDPLN---------------------------------------------DARXXXXXXXXXXXXXXXXXXXGIQPRFLDRLSPEDFMD 105
            ID + V  VA  +AG+ GG+ ++A+TE+ G R ++  N QPC EC G+    C +C GS +DPL                                              +                     GIQPRFL+R SP+DFMD
Sbjct:   51 IDGSTVLGVAVGLAGVLGGVGIIAFTESAGKRNEELANAQPCVECKGKKVVECTICEGSGEDPLVSLVQGVREASGEIKASNVVKIEDWAEGPKEVVMFEDILSAYPKKVEKDVCLNCEGRGVVVCDNCRGTGIQPRFLERYSPDDFMD 199          
BLAST of Gvermi6784.t1 vs. uniprot
Match: M1UNZ2_CYAM1 (Uncharacterized protein n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1UNZ2_CYAM1)

HSP 1 Score: 60.5 bits (145), Expect = 3.290e-9
Identity = 41/98 (41.84%), Postives = 50/98 (51.02%), Query Frame = 0
Query:   11 ATMVAGIG--GGIALVAWTETQGTRTKQRQNTQPCTECGGQTTTVCNVCNGSSKDPLND-ARXXXXXXXXXXXXXXXXXXXGIQPRFLDRLSPEDFMD 105
            A +V G+G   GI L+A+TE QG R K R   +PC EC G     C  C G  K       +   XXXXX           G+QPR+LDR+ PED MD
Sbjct:   63 ALIVGGLGTIAGIGLLAFTEVQGERGKARGRREPCVECRGDGQVACGYCQGRGKLGFGQYEKECSXXXXXSTVVCLNCGGSGLQPRYLDRIRPEDLMD 160          
BLAST of Gvermi6784.t1 vs. uniprot
Match: A0A7J7IEW1_9RHOD (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IEW1_9RHOD)

HSP 1 Score: 60.1 bits (144), Expect = 4.540e-9
Identity = 41/104 (39.42%), Postives = 54/104 (51.92%), Query Frame = 0
Query:    3 DQNAVAIVATMVAGIGGGIALVAWTETQGTRTKQRQNTQPCTECGGQTTTVCNVCNGSSKDPLND-ARXXXXXXXXXXXXXXXXXXXGIQPRFLDRLSPEDFMD 105
            D   +A +     G+  G+ ++A+TE QG R K R  T+PC +C G     C  C G  K       + XXXXXXXX          G+QPR+LDR+ PED MD
Sbjct:   56 DNGTLAAIVVGAVGVFVGVGILAFTEAQGERGKARGRTEPCVDCLGNGQVACGYCQGRGKLGFGQYEQDXXXXXXXXMVACLNCGGTGLQPRYLDRIRPEDLMD 159          
The following BLAST results are available for this feature:
BLAST of Gvermi6784.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3IXM0_9FLOR1.360e-3979.05Protein disulfide-isomerase LQY1, chloroplastic n=... [more]
M2XWY2_GALSU3.900e-1660.64Chaperone protein / DnaJ-related protein n=1 Tax=G... [more]
A0A7S3U1S3_9SPIT3.170e-928.19Hypothetical protein (Fragment) n=2 Tax=Choreotric... [more]
M1UNZ2_CYAM13.290e-941.84Uncharacterized protein n=1 Tax=Cyanidioschyzon me... [more]
A0A7J7IEW1_9RHOD4.540e-939.42Uncharacterized protein n=1 Tax=Cyanidiococcus yan... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR15852:SF27PROTEIN DISULFIDE-ISOMERASE LQY1, CHLOROPLASTICcoord: 2..98
NoneNo IPR availablePANTHERPTHR15852PLASTID TRANSCRIPTIONALLY ACTIVE PROTEINcoord: 2..98
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..27
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 28..105
NoneNo IPR availableTMHMMTMhelixcoord: 5..27
IPR036410Heat shock protein DnaJ, cysteine-rich domain superfamilySUPERFAMILY57938DnaJ/Hsp40 cysteine-rich domaincoord: 37..91

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_88contigScGOVlb_88:2274594..2275012 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6784.t1Gvermi6784.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_88 2274594..2275012 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6784.t1 ID=Gvermi6784.t1|Name=Gvermi6784.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=106bp
MIDQNAVAIVATMVAGIGGGIALVAWTETQGTRTKQRQNTQPCTECGGQT
TTVCNVCNGSSKDPLNDARPCSYCDGVGNIKCFNCSGSGIQPRFLDRLSP
EDFMD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036410HSP_DnaJ_Cys-rich_dom_sf