Gvermi6783.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6783.t1
Unique NameGvermi6783.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length240
Homology
BLAST of Gvermi6783.t1 vs. uniprot
Match: A0A2V3IXJ4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXJ4_9FLOR)

HSP 1 Score: 298 bits (764), Expect = 1.630e-99
Identity = 152/234 (64.96%), Postives = 183/234 (78.21%), Query Frame = 0
Query:    1 MERVPLLNNSSENIEPAPAAQSPPPQDDQFSGTELSSDTERNDPPSFFDRIMDSIHAMFMHFCHKLGWFFLRFLSFVMLHCGIICAGVFQMLAFYYTGVLNLYVMIACFLYAPALVAISIIREEIVVNGTSRSGAGPRLTHEVAIAYLLLTVFGFCSVLQPLFMHADNVISYKSMWTSIGGTAIFYYCVLISEVLFASASNVNRARLRDEELERERTDQPFWIKRYESLRAKES 234
            MERVPL+ NSS N    P+       D+  S TE SS  ERN  PS  DRI+D +HA+F   C  LG+ FLR LS +MLHCGII AGV QMLAFYYTGVLN +V++AC LYAPAL AIS+IREEIV+NGTS SGAGPR+T EVA+AYL+L++ G  SVL PLFMHA+N+ISYKSMWTSIG T  +YYC+LISEVLFASASNV R+R R+EELER+R +QPFWI RYE++ +K++
Sbjct:    8 MERVPLMANSSANDVVMPSTSQHAADDEPLSETEFSSQNERNTNPSLLDRILDRVHAVFSVLCRSLGYLFLRMLSIIMLHCGIIGAGVLQMLAFYYTGVLNSHVLLACLLYAPALCAISVIREEIVLNGTSHSGAGPRITQEVAVAYLILSIAGISSVLHPLFMHAENMISYKSMWTSIGATTFYYYCLLISEVLFASASNVQRSRDREEELERQRANQPFWITRYEAIHSKDN 241          
BLAST of Gvermi6783.t1 vs. uniprot
Match: R7Q5F7_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q5F7_CHOCR)

HSP 1 Score: 202 bits (514), Expect = 8.500e-62
Identity = 109/235 (46.38%), Postives = 154/235 (65.53%), Query Frame = 0
Query:    1 MERVPLLNNSSENIEPAPAAQ-----SPPPQDDQFSGTELSSDTERNDPPSFFDRIMDSIHAMFMHFCHKLGWFFLRFLSFVMLHCGIICAGVFQMLAFYYTGVLNLYVMIACFLYAPALVAISIIREEIVVNGTSRSGAGPRLTHEVAIAYLLLTVFGFCSVLQPLFMHADNVISYKSMWTSIGGTAIFYYCVLISEVLFASASNVNRARLRDEELERERTDQPFWIKRYESLR 230
            M++VP+   S  +    P+A+     SP P      G   S+ ++       FDR +  +HA F  FCH LG FFLR LS +ML  G++ + V QMLA+YYTGVLN +V +AC L+AP L A+++IR E+  +G SRSGAGPR++  V +AYL++TVF   S++QP+ MH +N I  KSMWT++GG A+FYY +L+SEVL+A A N++RA+ RD+EL R   D PFW+  Y + R
Sbjct:    1 MDKVPVPPRSPASDAVTPSAETTPLISPAPPLADHPGAPDSAPSDAG----IFDRFLTRVHAFFSRFCHSLGAFFLRALSTLMLLAGVVASVVVQMLAYYYTGVLNPWVFLACLLFAPTLAAVTVIRAELNFSGPSRSGAGPRMSQYVTLAYLVITVFAVASLMQPVVMHGENKIPGKSMWTALGGVALFYYSMLVSEVLYAVALNIDRAKERDDELLRRDRDDPFWLSSYNATR 231          
The following BLAST results are available for this feature:
BLAST of Gvermi6783.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IXJ4_9FLOR1.630e-9964.96Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q5F7_CHOCR8.500e-6246.38Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..36
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..17
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 143..163
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 164..174
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 123..142
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 97..101
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..68
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 199..239
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 175..198
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 69..96
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 102..122
NoneNo IPR availableTMHMMTMhelixcoord: 68..90
NoneNo IPR availableTMHMMTMhelixcoord: 100..122
NoneNo IPR availableTMHMMTMhelixcoord: 143..165
NoneNo IPR availableTMHMMTMhelixcoord: 175..197

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_88contigScGOVlb_88:2273632..2274351 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6783.t1Gvermi6783.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_88 2273632..2274351 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6783.t1 ID=Gvermi6783.t1|Name=Gvermi6783.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=240bp
MERVPLLNNSSENIEPAPAAQSPPPQDDQFSGTELSSDTERNDPPSFFDR
IMDSIHAMFMHFCHKLGWFFLRFLSFVMLHCGIICAGVFQMLAFYYTGVL
NLYVMIACFLYAPALVAISIIREEIVVNGTSRSGAGPRLTHEVAIAYLLL
TVFGFCSVLQPLFMHADNVISYKSMWTSIGGTAIFYYCVLISEVLFASAS
NVNRARLRDEELERERTDQPFWIKRYESLRAKESGNPDV*
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