Gvermi6718.t2 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6718.t2
Unique NameGvermi6718.t2
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length273
Homology
BLAST of Gvermi6718.t2 vs. uniprot
Match: A0A2V3J4U2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4U2_9FLOR)

HSP 1 Score: 300 bits (767), Expect = 1.250e-94
Identity = 145/265 (54.72%), Postives = 198/265 (74.72%), Query Frame = 0
Query:    1 MAKHPSPRFMKTAIMALTSVGLVEKAENLFHEVGQSHPSGVPDEETFGNLMAGYGNHLQLMPAEVADEVLANGKLEEVNKKADQLWGLYLKHHRTLKIGSLRLSQRNMMIGNYLRVKIRSYRIKEAVDILEVLVVSRDMYPTLNVGIGHICSTLGAIELCCDVLQLERLTEIMRQGGIKHDMRSLAFAVGTYVGDGNLSAALKLVEQHFADVTENETVSSQFRNHHPQLLFRRMQTLRSALRDSGIKKLKTLDDSLRNFERRHAM 265
            MAKHPSP+FMK A+MALTSVGL+E+AE LF+EVG     GV +E+ FG LM GYGN+LQL+  E  D V  N K EE+NKKAD LW ++++H+        +   +NM++ NY+RVK R ++ KEAVDILE +V++R+ YP L V  GHIC+ LGA+EL CDV QL RL  IM+   I HDMRSLAF++GT++GDGNL+AAL+LV++H A+V + ET+S QFR HHP LL RR++TLR+ LRD+GI  ++ L+D++R+  R++ +
Sbjct:  351 MAKHPSPKFMKVALMALTSVGLMERAEALFYEVGHHQEDGVLNEDIFGYLMTGYGNYLQLLTVEEIDHVTVNRKYEEINKKADLLWEMHVQHYGHQVARRSKREAKNMLLRNYIRVKTRCFKAKEAVDILEQVVLNREKYPMLEVSTGHICTVLGAVELSCDVEQLTRLMHIMQVANINHDMRSLAFSIGTHIGDGNLTAALELVKEHLAEVMKRETISMQFRQHHPILLARRLETLRNGLRDAGIGNVEYLEDAVRSLRRKNVV 615          
BLAST of Gvermi6718.t2 vs. uniprot
Match: R7QUU2_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QUU2_CHOCR)

HSP 1 Score: 147 bits (372), Expect = 2.720e-38
Identity = 87/255 (34.12%), Postives = 141/255 (55.29%), Query Frame = 0
Query:    1 MAKHPSPRFMKTAIMALTSVGLVEKAENLFHEVGQSHPSGVPDEETFGNLMAGYGNHLQL-MPAEVADEVLANGKLEEVNKKADQLWGLYLKHHRTLKIGSLRLSQ-RNMMIGNYLRVKIRSYRIKEAVDILEVLVVSRDMYPTLNVGIGHICSTLGAIELCCDVLQLERLTEIMRQGGIKHDMRSLAFAVGTYVGDGNLSAALKLVEQHFADVTENETVSSQFRNHHPQLLFRRMQTLRSALRDSGIKKLKTLD 253
            M   P+PRF  TA++ LT+ G +++ E LF ++ +    G P E  F  LMAGY  H ++   +  A+E     ++   ++  +Q W  +L+ + + K  S  L + R   +  YLRV+   +R+  AVD+L+   V+      L V  G +   LGA+E+ CDV ++ R+ ++M   G++HD+R+L F VGT++GDGN+ AALKLV      +          R +H  L  RR+  LRSAL ++G+ K+K L+
Sbjct:  130 MVPEPTPRFRNTALLVLTAAGSLQRFEKLFKDIAEE---GTPSEHAFSALMAGYEKHFKVGWESGGAEEDTTKARMAVADRVEEQ-WEAFLQAYGSSKPRSKVLKRVRGAFLHRYLRVQTMCFRLGNAVDVLKR--VADGEIIGLEVSAGQVNGVLGAVEMACDVREMRRVLDVMESIGVRHDVRTLTFCVGTHLGDGNVDAALKLVRNEAPRLLAGGYQDEMLRQYHWGLFERRLDMLRSALEEAGVGKVKDLE 378          
The following BLAST results are available for this feature:
BLAST of Gvermi6718.t2 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J4U2_9FLOR1.250e-9454.72Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QUU2_CHOCR2.720e-3834.12Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 12..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..11
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 21..25
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..272
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_88contigScGOVlb_88:2085622..2086440 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6718.t2Gvermi6718.t2Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_88 2085622..2086440 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6718.t2 ID=Gvermi6718.t2|Name=Gvermi6718.t2|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=273bp
MAKHPSPRFMKTAIMALTSVGLVEKAENLFHEVGQSHPSGVPDEETFGNL
MAGYGNHLQLMPAEVADEVLANGKLEEVNKKADQLWGLYLKHHRTLKIGS
LRLSQRNMMIGNYLRVKIRSYRIKEAVDILEVLVVSRDMYPTLNVGIGHI
CSTLGAIELCCDVLQLERLTEIMRQGGIKHDMRSLAFAVGTYVGDGNLSA
ALKLVEQHFADVTENETVSSQFRNHHPQLLFRRMQTLRSALRDSGIKKLK
TLDDSLRNFERRHAMGGSSASG*
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