Gvermi6634.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6634.t1
Unique NameGvermi6634.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length248
Homology
BLAST of Gvermi6634.t1 vs. uniprot
Match: A0A2V3IND2_9FLOR (Cytochrome b reductase 1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IND2_9FLOR)

HSP 1 Score: 228 bits (580), Expect = 1.460e-71
Identity = 108/217 (49.77%), Postives = 153/217 (70.51%), Query Frame = 0
Query:    5 AASHAFWALLATSYTIWILTLLWTLLALGGLGADGSRLFNWHPILASGAVLAVLTPGVLVQQPSRHGNGQTRDWRIKVVHGFCMVITFVVLSVAISVAYSSHVQQAKPNFYSLHSWLGLGTIFLMKGNIIAGLTSTVCVQWNGIGLLGRSHRLGGIIVCLMAFVSMTVGFAEMQMNLGRIAKNVWQFKVVTAGILGVATMCVGSGVVCVLVSREQDR 221
            A S   W LLA SY++WI T+LW +L+LGGLG   SRLFNWHP+LASGAVL  LTPG+L    +RH +   R +R +++H  C+++ F+VL++A+SV Y++HVQ  +P+FYSLHSWLG+  + LMKGNI+AG+ S +  ++ G G  G  HR  G  +C ++F+S  +GFA MQ +L R +  VWQ KVV AG+LG A++CVG+ ++ +L S E  R
Sbjct:    5 ATSSTRWMLLAASYSVWITTILWAVLSLGGLGTTASRLFNWHPVLASGAVLGALTPGILAHT-ARHSDDAKRRFRARLLHALCVLLAFIVLTIAVSVVYANHVQHKQPHFYSLHSWLGVTCLLLMKGNIVAGIASALFPRFQG-GSFGTMHRYTGAFICFLSFMSAALGFAHMQDSLSRTSGGVWQVKVVLAGLLGAASLCVGTALILLLFSGEHFR 219          
BLAST of Gvermi6634.t1 vs. uniprot
Match: A0A7K8MRP2_9CORV (CYAC3 protein (Fragment) n=3 Tax=Passeriformes TaxID=9126 RepID=A0A7K8MRP2_9CORV)

HSP 1 Score: 77.0 bits (188), Expect = 4.060e-13
Identity = 60/213 (28.17%), Postives = 91/213 (42.72%), Query Frame = 0
Query:   33 GGLGADGS-RLFNWHPILASGAVLAVLTPGVLVQQPSRHGNGQTRDWRIKVVHGFCMVITFVVLSVAISVAYSSHVQQAKPNFYSLHSWLGLGTIFLMKGNIIAGLTSTVCVQWNGI---GLLGRSHRLGGIIVCLMAFVSMTVGFAE---MQMNLGRIAKNVWQFKVVTAGILGVATMCVGSGVVCVLVSREQDRRFAASVMDERIREKTAG 238
            GG   DGS R FNWHP+L    ++ +     LV +     +G    W  KV+HG   +  FV+  + ++  +  H  Q  PN YSLHSW+GLGT+ L      AG  + + + W       L    H   G  + +++  S   G  E     +  G  A  +   + V A  LG+  +  G  VV  L      R  + S    ++R+   G
Sbjct:   56 GGFSLDGSSRTFNWHPVLMVMGLVVLYGAAALVYRIPNTWSGPKLPW--KVLHGSLALGAFVLTVLGLAAVFHFHNSQGTPNMYSLHSWMGLGTVLLFSCQWAAGFGAFL-LPWAPAWLRALYKPIHVFFGSTILMLSVASCVSGINEKLFFSLKNGTTAYKLLPAEAVFANTLGLLILIFGVLVVGALARPSWKRPDSDSPDSRQVRDTLGG 265          
BLAST of Gvermi6634.t1 vs. uniprot
Match: G1N078_MELGA (Cytochrome b561 family member A3 n=3 Tax=Phasianidae TaxID=9005 RepID=G1N078_MELGA)

HSP 1 Score: 76.3 bits (186), Expect = 1.010e-12
Identity = 57/204 (27.94%), Postives = 89/204 (43.63%), Query Frame = 0
Query:   33 GGLGADGS-RLFNWHPILASGAVLAVLTPGVLVQQPSRHGNGQTRDWRIKVVHGFCMVITFVVLSVAISVAYSSHVQQAKPNFYSLHSWLGLGTIFLMKGNIIAGLTSTVCVQ---WNGIGLLGRSHRLGGIIVCLMAFVSMTVG-----FAEMQMNLGRIAKNVWQFKVVTAGILGVATMCVGSGVVCVLVSREQDRRFAASV 227
            GG   DGS R+FNWHP+L    ++ +     LV +      G    W  K++H    +I F++  + +   ++ H     PN YSLHSWLGLGTI L     +AG ++ +      W    L    H   G  + +++  S   G     F  ++     +   +   + V A ILG+  +  G  V+C L      R  A S+
Sbjct:   52 GGFAWDGSARMFNWHPVLMVTGMVVLYGAAALVYRLPPTWRGPKLPW--KMLHSTLALIAFILAVLGLVAVFNFHNASGTPNMYSLHSWLGLGTILLFSCQWVAGFSAFLLPYAPIWLR-ALYKPIHIFFGSTILMLSMASCVSGINEKLFFSLKNGTASVPYKLLPPEAVFANILGLLIILFGVLVLCALAKPSWKRPGADSL 252          
BLAST of Gvermi6634.t1 vs. uniprot
Match: UPI000939BB72 (cytochrome b ascorbate-dependent protein 3 isoform X2 n=2 Tax=Phasianidae TaxID=9005 RepID=UPI000939BB72)

HSP 1 Score: 76.3 bits (186), Expect = 1.050e-12
Identity = 57/204 (27.94%), Postives = 89/204 (43.63%), Query Frame = 0
Query:   33 GGLGADGS-RLFNWHPILASGAVLAVLTPGVLVQQPSRHGNGQTRDWRIKVVHGFCMVITFVVLSVAISVAYSSHVQQAKPNFYSLHSWLGLGTIFLMKGNIIAGLTSTVCVQ---WNGIGLLGRSHRLGGIIVCLMAFVSMTVG-----FAEMQMNLGRIAKNVWQFKVVTAGILGVATMCVGSGVVCVLVSREQDRRFAASV 227
            GG   DGS R+FNWHP+L    ++ +     LV +      G    W  K++H    +I F++  + +   ++ H     PN YSLHSWLGLGTI L     +AG ++ +      W    L    H   G  + +++  S   G     F  ++     +   +   + V A ILG+  +  G  V+C L      R  A S+
Sbjct:   80 GGFAWDGSARMFNWHPVLMVTGMVVLYGAAALVYRLPPTWRGPKLPW--KMLHSTLALIAFILAVLGLVAVFNFHNASGTPNMYSLHSWLGLGTILLFSCQWVAGFSAFLLPYAPIWLR-ALYKPIHIFFGSTILMLSMASCVSGINEKLFFSLKNGTASVPYKLLPPEAVFANILGLLIILFGVLVLCALAKPSWKRPGADSL 280          
BLAST of Gvermi6634.t1 vs. uniprot
Match: A0A7K6G912_9PASS (CYAC3 protein (Fragment) n=1 Tax=Malurus elegans TaxID=720584 RepID=A0A7K6G912_9PASS)

HSP 1 Score: 75.1 bits (183), Expect = 1.720e-12
Identity = 38/105 (36.19%), Postives = 55/105 (52.38%), Query Frame = 0
Query:   33 GGLGADGS-RLFNWHPILASGAVLAVLTPGVLVQQPSRHGNGQTRDWRIKVVHGFCMVITFVVLSVAISVAYSSHVQQAKPNFYSLHSWLGLGTIFLMKGNIIAG 136
            GG   DGS R FNWHP+L    ++ +     LV +     +G    W  K++HG   +  F++  + ++  +S H  Q  PN YSLHSW+GLGT+ L      AG
Sbjct:   44 GGFSLDGSSRTFNWHPVLMVTGLVVLYGAAALVYRVPNTWSGPKLPW--KLLHGSLALGAFILTVLGLAAVFSFHNSQGTPNMYSLHSWMGLGTVLLFSCQWAAG 146          
BLAST of Gvermi6634.t1 vs. uniprot
Match: A0A3L8S5W1_CHLGU (Cytochrome b561 domain-containing protein n=1 Tax=Chloebia gouldiae TaxID=44316 RepID=A0A3L8S5W1_CHLGU)

HSP 1 Score: 76.6 bits (187), Expect = 2.040e-12
Identity = 62/213 (29.11%), Postives = 93/213 (43.66%), Query Frame = 0
Query:   33 GGLGADGS-RLFNWHPILASGAVLAVLTPGVLVQQPSRHGNGQTRDWRIKVVHGFCMVITFVVLSVAISVAYSSHVQQAKPNFYSLHSWLGLGTIFLMKGNIIAGLTSTVCVQWNGI---GLLGRSHRLGGIIVCLMAFVSMTVGFAE---MQMNLGRIAKNVWQFKVVTAGILGVATMCVGSGVVCVLVSREQDRRFAASVMDERIREKTAG 238
            GG   DGS R FNWHP+L    ++ +    VLV +     +G    W  KV+H    +  F++  + +S  +  H  Q  PN YSLHSW+GLGT+ L      AG  + + + W       L    H   G  + L++  S   G  E     +  G +   +   + V A  LG+  +  G  VV  L +R   +R  +   D R  + T G
Sbjct:  168 GGFSLDGSSRTFNWHPVLMVTGLVVLYGAAVLVYRIPYTWSGPKLPW--KVLHSSLALGAFILTVLGLSAVFCFHNSQGTPNMYSLHSWMGLGTVLLFSCQWAAGFGAFL-LPWPPTWLRALYKPIHVFFGSTILLLSVASCVSGINEKLFFSLKNGTVQYKLLPAEAVFANTLGLLILIFGVLVVAAL-ARPSWKRPDSDSPDSRQVQDTQG 376          
BLAST of Gvermi6634.t1 vs. uniprot
Match: A0A674HLN3_TAEGU (Cytochrome b561 domain-containing protein n=1 Tax=Taeniopygia guttata TaxID=59729 RepID=A0A674HLN3_TAEGU)

HSP 1 Score: 75.1 bits (183), Expect = 2.670e-12
Identity = 56/189 (29.63%), Postives = 83/189 (43.92%), Query Frame = 0
Query:   33 GGLGADGS-RLFNWHPILASGAVLAVLTPGVLVQQPSRHGNGQTRDWRIKVVHGFCMVITFVVLSVAISVAYSSHVQQAKPNFYSLHSWLGLGTIFLMKGNIIAGLTSTV---CVQWNGIGLLGRSHRLGGIIVCLMAFVSMTVGFAE---MQMNLGRIAKNVWQFKVVTAGILGVATMCVGSGVVCVL 214
            GG   DGS R FNWHP+L    ++ +     LV +     +G    W  KV+HG   +  F++  + +S  +  H  Q  PN YSLHSW+GLGT+ L      AG  + +      W  + L    H   G  + L++  S   G  E     +  G +   +   + V A  LG+  +  G  VV  L
Sbjct:   54 GGFSLDGSSRTFNWHPVLMVTGLVVLYGAAALVYRIPYTWSGPKLPW--KVLHGSLALGAFILTVLGLSAVFYFHNSQGTPNMYSLHSWIGLGTVLLFSCQWAAGFGAFLLPWAPTWLRV-LYKPIHVFFGSTILLLSVASCVSGINEKLFFSLKNGTMQYKLLPAEAVFANTLGLLILIFGVLVVAAL 239          
BLAST of Gvermi6634.t1 vs. uniprot
Match: A0A835NJX9_9PASS (Cytochrome b561 domain-containing protein n=26 Tax=Passeriformes TaxID=9126 RepID=A0A835NJX9_9PASS)

HSP 1 Score: 74.3 bits (181), Expect = 2.810e-12
Identity = 54/189 (28.57%), Postives = 83/189 (43.92%), Query Frame = 0
Query:   33 GGLGADGS-RLFNWHPILASGAVLAVLTPGVLVQQPSRHGNGQTRDWRIKVVHGFCMVITFVVLSVAISVAYSSHVQQAKPNFYSLHSWLGLGTIFLMKGNIIAGLTSTVCVQWNGI---GLLGRSHRLGGIIVCLMAFVSMTVGFAE---MQMNLGRIAKNVWQFKVVTAGILGVATMCVGSGVVCVL 214
            GG   DGS R FNWHP+L    ++ +     LV +     +G    W  KV+HG   +  F++  + ++  +  H  Q  PN YSLHSW+GLGT+ L      AG  + + + W       L    H   G  + +++  S   G  E     +  G +   +   + V A  LG+  +  G  VV  L
Sbjct:   33 GGFSLDGSSRTFNWHPVLMVTGLVVLYGAAALVYRIPNTWSGPKLPW--KVLHGSLALGAFILTVLGLAAVFCFHNSQGTPNMYSLHSWMGLGTVLLFSCQWAAGFGAFL-LPWAPTWLRALYKPIHVFFGSTILMLSVASCVSGINEKLFFSLKNGTMEYKLLPAEAVFANTLGLLILIFGVLVVAAL 218          
BLAST of Gvermi6634.t1 vs. uniprot
Match: A0A7K7XTW7_9PASS (CYAC3 protein (Fragment) n=5 Tax=Passeriformes TaxID=9126 RepID=A0A7K7XTW7_9PASS)

HSP 1 Score: 73.9 bits (180), Expect = 5.140e-12
Identity = 39/105 (37.14%), Postives = 54/105 (51.43%), Query Frame = 0
Query:   33 GGLGADGS-RLFNWHPILASGAVLAVLTPGVLVQQPSRHGNGQTRDWRIKVVHGFCMVITFVVLSVAISVAYSSHVQQAKPNFYSLHSWLGLGTIFLMKGNIIAG 136
            GG   DGS R FNWHP+L    ++ +     LV +     +G    W  KV+HG   +  FV+  + ++  +  H  Q  PN YSLHSW+GLGT+ L      AG
Sbjct:   54 GGFSLDGSSRTFNWHPVLMVTGLVVLYGAAALVYRIPNTWSGPKLPW--KVLHGGLALGAFVLTVLGLAAVFRFHNSQGTPNMYSLHSWMGLGTVLLFSCQWAAG 156          
BLAST of Gvermi6634.t1 vs. uniprot
Match: U3KBU3_FICAL (Cytochrome b561 family member A3 n=100 Tax=Passeriformes TaxID=9126 RepID=U3KBU3_FICAL)

HSP 1 Score: 73.6 bits (179), Expect = 7.080e-12
Identity = 54/189 (28.57%), Postives = 83/189 (43.92%), Query Frame = 0
Query:   33 GGLGADGS-RLFNWHPILASGAVLAVLTPGVLVQQPSRHGNGQTRDWRIKVVHGFCMVITFVVLSVAISVAYSSHVQQAKPNFYSLHSWLGLGTIFLMKGNIIAGLTSTVCVQWNGI---GLLGRSHRLGGIIVCLMAFVSMTVGFAE---MQMNLGRIAKNVWQFKVVTAGILGVATMCVGSGVVCVL 214
            GG   DGS R FNWHP+L    ++ +     LV +     +G    W  KV+HG   +  F++  + ++  +  H  Q  PN YSLHSW+GLGT+ L      AG  + + + W       L    H   G  + +++  S   G  E     +  G +   +   + V A  LG+  +  G  VV  L
Sbjct:   54 GGFSLDGSSRTFNWHPVLMVMGLVVLYGAAALVYRIPHTWSGPKLPW--KVLHGSLALGAFILTVLGLAAVFRFHNAQGTPNMYSLHSWMGLGTVLLFSCQWAAGFGAFL-LPWAPAWLRALYKPIHIFFGSTILMLSVASCVSGINEKLFFSLKNGTMQYKLLPAEAVFANTLGLLILIFGVLVVAAL 239          
The following BLAST results are available for this feature:
BLAST of Gvermi6634.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IND2_9FLOR1.460e-7149.77Cytochrome b reductase 1 n=1 Tax=Gracilariopsis ch... [more]
A0A7K8MRP2_9CORV4.060e-1328.17CYAC3 protein (Fragment) n=3 Tax=Passeriformes Tax... [more]
G1N078_MELGA1.010e-1227.94Cytochrome b561 family member A3 n=3 Tax=Phasianid... [more]
UPI000939BB721.050e-1227.94cytochrome b ascorbate-dependent protein 3 isoform... [more]
A0A7K6G912_9PASS1.720e-1236.19CYAC3 protein (Fragment) n=1 Tax=Malurus elegans T... [more]
A0A3L8S5W1_CHLGU2.040e-1229.11Cytochrome b561 domain-containing protein n=1 Tax=... [more]
A0A674HLN3_TAEGU2.670e-1229.63Cytochrome b561 domain-containing protein n=1 Tax=... [more]
A0A835NJX9_9PASS2.810e-1228.57Cytochrome b561 domain-containing protein n=26 Tax... [more]
A0A7K7XTW7_9PASS5.140e-1237.14CYAC3 protein (Fragment) n=5 Tax=Passeriformes Tax... [more]
U3KBU3_FICAL7.080e-1228.57Cytochrome b561 family member A3 n=100 Tax=Passeri... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006593Cytochrome b561/ferric reductase transmembraneSMARTSM00665561_7coord: 45..174
e-value: 0.0019
score: 7.9
IPR006593Cytochrome b561/ferric reductase transmembranePFAMPF03188Cytochrom_B561coord: 45..177
e-value: 1.3E-16
score: 61.0
IPR006593Cytochrome b561/ferric reductase transmembranePROSITEPS50939CYTOCHROME_B561coord: 12..215
score: 14.783587
NoneNo IPR availableGENE3D1.20.120.1770coord: 5..224
e-value: 1.4E-29
score: 104.9
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 195..215
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 176..194
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 104..122
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 34..44
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 216..247
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 65..84
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..33
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 45..64
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 123..145
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 157..175
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 85..103
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 146..156
NoneNo IPR availableTMHMMTMhelixcoord: 121..143
NoneNo IPR availableTMHMMTMhelixcoord: 156..178
NoneNo IPR availableTMHMMTMhelixcoord: 84..106
NoneNo IPR availableTMHMMTMhelixcoord: 193..215
NoneNo IPR availableTMHMMTMhelixcoord: 7..29
NoneNo IPR availableTMHMMTMhelixcoord: 42..64
IPR043205Cytochrome b561/Cytochrome b reductase 1-likePANTHERPTHR10106CYTOCHROME B561-RELATEDcoord: 1..221
IPR028836Putative transmembrane ascorbate-dependent reductase CYB561 homologuePANTHERPTHR10106:SF0LD36721Pcoord: 1..221

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_88contigScGOVlb_88:1788953..1789696 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6634.t1Gvermi6634.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_88 1788953..1789696 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6634.t1 ID=Gvermi6634.t1|Name=Gvermi6634.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=248bp
MARPAASHAFWALLATSYTIWILTLLWTLLALGGLGADGSRLFNWHPILA
SGAVLAVLTPGVLVQQPSRHGNGQTRDWRIKVVHGFCMVITFVVLSVAIS
VAYSSHVQQAKPNFYSLHSWLGLGTIFLMKGNIIAGLTSTVCVQWNGIGL
LGRSHRLGGIIVCLMAFVSMTVGFAEMQMNLGRIAKNVWQFKVVTAGILG
VATMCVGSGVVCVLVSREQDRRFAASVMDERIREKTAGDKKDVAMVL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006593Cyt_b561/ferric_Rdtase_TM
IPR043205CYB561/CYBRD1-like
IPR028836Cyt_b561-like