Gvermi6612.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6612.t1
Unique NameGvermi6612.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length236
Homology
BLAST of Gvermi6612.t1 vs. uniprot
Match: A0A2V3IRU0_9FLOR (Probable ATP-dependent transporter ycf16 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRU0_9FLOR)

HSP 1 Score: 242 bits (617), Expect = 1.290e-77
Identity = 123/229 (53.71%), Postives = 158/229 (69.00%), Query Frame = 0
Query:    1 MLHVRELRKTYGARDAPALRDLSLHLAPAEIVFLVGPSGAGKTTALRCIANLDPFDAGAVTVDGRSPRQTGFAQWRRRVMYVPQHRVALPGTPAALFERALALAAHAPPADPPRXXXXXXXXXXXXXPAARLERFVDVCRSMGLSRANVCTQQWSELSGGQAQRATVSLCIALRPSVLLLDEPSSSCDLQSTLSMERAIKRSNIAAVWVSHDTSQPHRVGGRIINMQPP 229
            ML V  L K+Y    +  L   SLHL P EI+FLVGPSG GK++ALRCIANLD +++G +T   ++P+Q GF +WRR + YVPQHRV+  GTP  LF+R+L L +                         RL  ++ +C+SMGL++ ++ +QQW ELSGGQAQRA ++LCIA+RP VLLLDEPSSSCD  STL +E+AIK S IAA+WVSHD +QPHRVGGRI+NM PP
Sbjct:    1 MLRVSCLTKSYNT--STILNSFSLHLNPKEILFLVGPSGIGKSSALRCIANLDRYESGEITFYDKTPQQLGFCEWRRHITYVPQHRVSFKGTPMELFKRSLGLRSRR--------------NVSKSTETQRLGEYLTICKSMGLNQDSIQSQQWVELSGGQAQRAIIALCIAIRPDVLLLDEPSSSCDQSSTLLVEQAIKDSGIAAIWVSHDPTQPHRVGGRIMNMSPP 213          
BLAST of Gvermi6612.t1 vs. uniprot
Match: A0A7S3VKL1_DUNTE (Hypothetical protein n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3VKL1_DUNTE)

HSP 1 Score: 164 bits (415), Expect = 4.860e-47
Identity = 96/238 (40.34%), Postives = 131/238 (55.04%), Query Frame = 0
Query:    1 MLHVRELRKTYGARDAPALRDLSLHLAPAEIVFLVGPSGAGKTTALRCIANLDPFDAGAVTVDGRSPRQTGFAQWRRRVMYVPQHRVALPGTPAALFERALALAAHAPPADPPRXXXXXXXXXXXXXPAARLERFVDVCRSMGLSRANVCTQQWSELSGGQAQRATVSLCIALRPSVLLLDEPSSSCDLQSTLSMERAIKRSNIAAVWVSHDTSQPHRVGG--------RIINMQPPP 230
            ML V  L++    +  P +   S  L   +++F+ GPSG GKT  +R IA LD   AG + + G++P Q GF  WR  VMYVPQ RVAL GTP   +  A    A                      P   L   + +   MGL+++ V  QQWSELSGGQAQR  + +C AL+P VLLLDEP+S+CD  ST  +E+A+K   ++ +W++HD  QP+RVGG        RI+ + PPP
Sbjct:    1 MLEVTGLKRVVEGQ--PIIEACSFTLERGQVLFITGPSGCGKTLLMRSIACLDKAQAGTLLLHGKTPEQIGFPTWRAHVMYVPQARVALKGTPTEFYFAAQQFHAQR------------------GRPRGDL---LALAHDMGLAQS-VLNQQWSELSGGQAQRVMLCVCAALQPDVLLLDEPTSACDPVSTKKVEKALKGCGVSLIWITHDPEQPYRVGGSMLELPTGRIVPLPPPP 214          
BLAST of Gvermi6612.t1 vs. uniprot
Match: A0A0D2LSN9_9CHLO (sn-glycerol-3-phosphate import ATP-binding protein ugpC 2 n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2LSN9_9CHLO)

HSP 1 Score: 163 bits (412), Expect = 2.450e-46
Identity = 86/226 (38.05%), Postives = 120/226 (53.10%), Query Frame = 0
Query:    1 MLHVRELRKTYGARDAPALRDLSLHLAPAEIVFLVGPSGAGKTTALRCIANLDPFDAGAVTVDGRSPRQTGFAQWRRRVMYVPQHRVALPGTPAALFERALALAAHAPPADPPRXXXXXXXXXXXXXPAARLERFVDVCRSMGLSRANVCTQQWSELSGGQAQRATVSLCIALRPSVLLLDEPSSSCDLQSTLSMERAIKRSNIAAVWVSHDTSQPHRVGGRIINM 226
            +L  R L ++   +D P    + + +   +++F+ GPSGAGKT  LR +A LDP + GA+ + G +P +TG   WR  V YV Q RV  PGTP   F+ A  L                           R      V   MGL    V  Q+W+ LSGGQAQR  +++ +AL+PSVLL+DEP+S+CDL S   +E  +K    A +WV+HD  QP RVGGR + +
Sbjct:    3 LLQARGLTRSLPGKDGPVFSGIDISIEAGQVLFIKGPSGAGKTLLLRTVALLDPSEGGALQLRGLAPTETGIPAWRSEVTYVHQARVDFPGTPREFFDAARQLGTRR---------------------GRRAGDLAAVVADMGLDPEVVLDQKWASLSGGQAQRVALAVAVALQPSVLLVDEPTSACDLDSARRVEAVLKGCGAAVIWVTHDPGQPPRVGGRQLEL 207          
BLAST of Gvermi6612.t1 vs. uniprot
Match: A0A383W8B0_TETOB (ABC transporter domain-containing protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383W8B0_TETOB)

HSP 1 Score: 164 bits (414), Expect = 3.250e-46
Identity = 95/235 (40.43%), Postives = 134/235 (57.02%), Query Frame = 0
Query:    1 MLHVRELRKTYGARDAPALRDLSLHLAPAEIVFLVGPSGAGKTTALRCIANLDPFDAGAVTVDGRSPRQTGFAQWRRRVMYVPQHRVALPGTPAALFERALALAAHAPPADPPRXXXXXXXXXXXXXPAARLERFVDVCRSMGLSRANVCTQQWSELSGGQAQRATVSLCIALRPSVLLLDEPSSSCDLQSTLSMERAIKRSNIAAVWVSHDTSQPHRVGGRIINMQPPPAAASH 235
            +L V +L+++ G R   +  ++S  + P EI FL GPSG GKT  LR +A LDP +AG + + G+SP + G   WR +VMYV Q RV   GTP   F  A + AA                      P   L + V     +GL  A V  QQWSELSGGQAQR  +++ +AL+P +LLLDEP+S+CD ++ L +E  +KR + A +WV+HD  QP RVGG ++ +    A++ H
Sbjct:    6 LLVVHQLKRSVGGRTLWS--NISFEVFPGEIWFLRGPSGVGKTLLLRAVACLDPLEAGWLKLSGQSPSEVGIPCWRAQVMYVHQSRVNFKGTPQEFFTLAQSFAAQK------------------GRPRGDLAQLV---ADLGLD-AGVLQQQWSELSGGQAQRVALAVSLALQPKLLLLDEPTSACDTEAALKVEAVLKRCSAAVLWVTHDPQQPLRVGGMLLELPEGNASSIH 216          
BLAST of Gvermi6612.t1 vs. uniprot
Match: A0A087SN02_AUXPR (Fe(3+) ions import ATP-binding protein FbpC n=1 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087SN02_AUXPR)

HSP 1 Score: 162 bits (410), Expect = 4.620e-46
Identity = 92/225 (40.89%), Postives = 126/225 (56.00%), Query Frame = 0
Query:    2 LHVRELRKTYGARDAPALRDLSLHLAPAEIVFLVGPSGAGKTTALRCIANLDPFDAGAVTVDGRSPRQTGFAQWRRRVMYVPQHRVALPGTPAALFERALALAAHAPPADPPRXXXXXXXXXXXXXPAARLERFVDVCRSMGLSRANVCTQQWSELSGGQAQRATVSLCIALRPSVLLLDEPSSSCDLQSTLSMERAIKRSNIAAVWVSHDTSQPHRVGGRIINM 226
            L VR LR++ G  D     +LS  L   EI+F+ GPSG GK+  LRC+A LDP D+G++++ G+ P + G  +WR  V YV Q R+A PGTP+  + R   LAA                       +        +  S+GL    V  Q W ELSGGQAQR ++ + +AL+P++LLLDEP+SS D  S   +E A+K      VWVSHD  QP RVGGR++N+
Sbjct:   15 LAVRNLRRSVG--DNLIHSNLSFSLRSGEILFVRGPSGVGKSVLLRCLACLDPIDSGSLSLSGQPPEKWGLPRWRSLVTYVHQARIAHPGTPSQYYFRLQQLAAQR---------------------SRERGDLPSIVSSLGLE-PEVLNQAWQELSGGQAQRVSLGIALALKPAILLLDEPTSSLDAASAEKVESALKTCGAGIVWVSHDPQQPDRVGGRVLNL 215          
BLAST of Gvermi6612.t1 vs. uniprot
Match: UPI001E1D8436 (phosphate import ATP-binding protein PstB 1-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D8436)

HSP 1 Score: 160 bits (406), Expect = 3.050e-45
Identity = 97/226 (42.92%), Postives = 134/226 (59.29%), Query Frame = 0
Query:    1 MLHVRELRKTYGARDAPALRDLSLHLAPAEIVFLVGPSGAGKTTALRCIANLDPFDA--GAVTVDGRSPRQTGFAQWRRRVMYVPQHRVALPGTPAALFERALALAAHAPPADPPRXXXXXXXXXXXXXPAARLERFVDVCRSMGLSRANVCTQQWSELSGGQAQRATVSLCIALRPSVLLLDEPSSSCDLQSTLSMERAIKR----SNIAAVWVSHDTSQPHRVG 220
            +L    LR++   +    L  LS  L P +I+F  GPSG GK+TALR IANLDP DA  G++T+   +P +     WR RVMYVPQ RV+  GTPA LFERA   A  A  ADP R                  +  + VC  +G+S A    Q+W +LSGGQAQRA++++ +AL+P+VLLLDE +S+ D ++T+ +E  I+     S ++ +WVSHD  QP R+G
Sbjct:   38 VLIAERLRRSVAGKKL--LPTLSFRLKPGQILFFTGPSGCGKSTALRLIANLDPPDADSGSITLGSLTPEELTSPVWRSRVMYVPQSRVSQTGTPANLFERAAKFAVRA--ADPIRLTVE--------------QDLLPVCAKIGISEAQA-HQEWQQLSGGQAQRASLAIALALQPNVLLLDESTSALDEKATILVESLIREVCANSGMSVIWVSHDVLQPLRLG 244          
BLAST of Gvermi6612.t1 vs. uniprot
Match: I0YZX5_COCSC (p-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YZX5_COCSC)

HSP 1 Score: 157 bits (397), Expect = 1.960e-44
Identity = 88/225 (39.11%), Postives = 124/225 (55.11%), Query Frame = 0
Query:    2 LHVRELRKTYGARDAPALRDLSLHLAPAEIVFLVGPSGAGKTTALRCIANLDPFDAGAVTVDGRSPRQTGFAQWRRRVMYVPQHRVALPGTPAALFERALALAAHAPPADPPRXXXXXXXXXXXXXPAARLERFVDVCRSMGLSRANVCTQQWSELSGGQAQRATVSLCIALRPSVLLLDEPSSSCDLQSTLSMERAIKRSNIAAVWVSHDTSQPHRVGGRIINM 226
            L V +L++  G  D   L D+S  +   E +F+ GPSG GK+  LR +A LDP   G + +DG++P Q G  QWR +V YVPQ R    GTP+ L+  A    A                      P   L   V     +GL ++ V  Q W ELSGGQAQR T+++CIAL+P+ LLLDEP+S+ D  S L+ ER +  S    +W++H+ +QP RVGGR++ +
Sbjct:    5 LEVHDLKRVIG--DRTILTDISFSVRAGEKLFIRGPSGVGKSLLLRALAYLDPIQGGTLFLDGKAPEQIGVPQWRTQVTYVPQSRTQQKGTPSELYFAAQQFKAQR------------------GRPRGDLPALV---AELGLEQS-VLNQPWIELSGGQAQRVTLAICIALKPTFLLLDEPTSALDHDSALAAERVLTSSGCGLIWITHEDAQPLRVGGRVLQL 205          
BLAST of Gvermi6612.t1 vs. uniprot
Match: D8TKB0_VOLCA (ABC transporter domain-containing protein (Fragment) n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8TKB0_VOLCA)

HSP 1 Score: 154 bits (388), Expect = 6.060e-43
Identity = 93/227 (40.97%), Postives = 126/227 (55.51%), Query Frame = 0
Query:    1 MLHVRELRKTYGARDAPALRDLSLHLAPAEIVFLVGPSGAGKTTALRCIANLDPFDAGAVTVDGRSPRQTGFAQWRRRVMYVPQHRVA-LPGTPAALFERALALAAHAPPADPPRXXXXXXXXXXXXXPAARLERFVDVCRSMGLSRANVCTQQWSELSGGQAQRATVSLCIALRPSVLLLDEPSSSCDLQSTLSMERAIKRSNIAAVWVSHDTSQPHRVGGRIINM 226
            +L VR LR+    R+   L ++S  L P EI+F+ GPSG GK+  LR +A LD    G + ++G  P Q G+  WR  V YVPQ R + L GTPA L+ RA    +                      P   L   +    S+GL ++ V  QQW ELSGGQAQR T+++ +AL   VLLLDEP+S+CD  +TL +ER +     A VWV+HD  QP RVGGR++ +
Sbjct:    4 LLEVRNLRRDVAERNI--LSNISFVLEPGEILFVRGPSGVGKSLLLRALACLDQPQGGTLLLNGCPPAQVGYPAWRTAVSYVPQSRASSLRGTPAELYFRAQRFGSQR------------------GRPRGDLPALI---HSLGLEQS-VLNQQWGELSGGQAQRVTLAVSLALGARVLLLDEPTSACDPLATLRVERVLSSCGAALVWVTHDQQQPTRVGGRLLEL 206          
BLAST of Gvermi6612.t1 vs. uniprot
Match: A0A3M7L0C1_AUXPR (ABC transporter domain-containing protein n=2 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A3M7L0C1_AUXPR)

HSP 1 Score: 162 bits (410), Expect = 3.930e-42
Identity = 92/225 (40.89%), Postives = 126/225 (56.00%), Query Frame = 0
Query:    2 LHVRELRKTYGARDAPALRDLSLHLAPAEIVFLVGPSGAGKTTALRCIANLDPFDAGAVTVDGRSPRQTGFAQWRRRVMYVPQHRVALPGTPAALFERALALAAHAPPADPPRXXXXXXXXXXXXXPAARLERFVDVCRSMGLSRANVCTQQWSELSGGQAQRATVSLCIALRPSVLLLDEPSSSCDLQSTLSMERAIKRSNIAAVWVSHDTSQPHRVGGRIINM 226
            L VR LR++ G  D     +LS  L   EI+F+ GPSG GK+  LRC+A LDP D+G++++ G+ P + G  +WR  V YV Q R+A PGTP+  + R   LAA                       +        +  S+GL    V  Q W ELSGGQAQR ++ + +AL+P++LLLDEP+SS D  S   +E A+K      VWVSHD  QP RVGGR++N+
Sbjct:  360 LAVRNLRRSVG--DNLIHSNLSFSLRSGEILFVRGPSGVGKSVLLRCLACLDPIDSGSLSLSGQPPEKWGLPRWRSLVTYVHQARIAHPGTPSQYYFRLQQLAAQR---------------------SRERGDLPSIVSSLGLE-PEVLNQAWQELSGGQAQRVSLGIALALKPAILLLDEPTSSLDAASAEKVESALKTCGAGIVWVSHDPQQPDRVGGRVLNL 560          
BLAST of Gvermi6612.t1 vs. uniprot
Match: A0A8J4GI46_9CHLO (Uncharacterized protein n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4GI46_9CHLO)

HSP 1 Score: 153 bits (387), Expect = 1.070e-41
Identity = 97/242 (40.08%), Postives = 131/242 (54.13%), Query Frame = 0
Query:    1 MLHVRELRKTYGARDAPALRDLSLHLAPAEIVFLVGPSGAGKTTALRCIANLDPFDAGAVTVDGRSPRQTGFAQWRRRVMYVPQHRVA-LPGTPAALFERALALAAHAPPADPPRXXXXXXXXXXXXXPAARLERFVDVCRSMGLSRANVCTQQWSELSGGQAQRATVSLCIALRPSVLLLDEPSSSCDLQSTLSMERAIKRSNIAAVWVSHDTSQPHRVGGR--------IINMQPPPAAA 233
            +L VR LR+    R+   L ++S  L P EI+F+ GPSG GK+  LR +A LD    G + + G  P   G+  WR  V YVPQ R + L GTPA L+ ++   +A                      P   L   V    ++GL +  V  QQW+ELSGGQ+QR  +++ +AL P VLLLDEPSS+CDL STL +ER +     A VWV+HD  Q  RVGGR        I+++ PPP A+
Sbjct:   11 LLEVRNLRRDVADRNI--LANISFTLEPGEILFIRGPSGVGKSLLLRALACLDHPQGGTLLLHGCPPAHVGYPAWRTAVSYVPQSRASSLKGTPAELYFQSQRFSAQR------------------ARPRGDLPALV---HALGLEQL-VLNQQWNELSGGQSQRVALAISLALGPQVLLLDEPSSACDLISTLRVERVLSSCGAALVWVTHDPQQLSRVGGRLLELPLGTIVHLPPPPLAS 228          
The following BLAST results are available for this feature:
BLAST of Gvermi6612.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IRU0_9FLOR1.290e-7753.71Probable ATP-dependent transporter ycf16 n=1 Tax=G... [more]
A0A7S3VKL1_DUNTE4.860e-4740.34Hypothetical protein n=1 Tax=Dunaliella tertiolect... [more]
A0A0D2LSN9_9CHLO2.450e-4638.05sn-glycerol-3-phosphate import ATP-binding protein... [more]
A0A383W8B0_TETOB3.250e-4640.43ABC transporter domain-containing protein n=1 Tax=... [more]
A0A087SN02_AUXPR4.620e-4640.89Fe(3+) ions import ATP-binding protein FbpC n=1 Ta... [more]
UPI001E1D84363.050e-4542.92phosphate import ATP-binding protein PstB 1-like n... [more]
I0YZX5_COCSC1.960e-4439.11p-loop containing nucleoside triphosphate hydrolas... [more]
D8TKB0_VOLCA6.060e-4340.97ABC transporter domain-containing protein (Fragmen... [more]
A0A3M7L0C1_AUXPR3.930e-4240.89ABC transporter domain-containing protein n=2 Tax=... [more]
A0A8J4GI46_9CHLO1.070e-4140.08Uncharacterized protein n=1 Tax=Volvox reticulifer... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003593AAA+ ATPase domainSMARTSM00382AAA_5coord: 28..230
e-value: 4.4E-12
score: 56.2
IPR003439ABC transporter-like, ATP-binding domainPFAMPF00005ABC_trancoord: 19..184
e-value: 4.7E-24
score: 85.5
IPR003439ABC transporter-like, ATP-binding domainPROSITEPS50893ABC_TRANSPORTER_2coord: 2..235
score: 13.285469
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 1..228
e-value: 3.2E-44
score: 153.3
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 2..227
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 110..127
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 106..127
NoneNo IPR availablePANTHERPTHR43119ABC TRANSPORT PROTEIN ATP-BINDING COMPONENT-RELATEDcoord: 1..229
IPR017871ABC transporter-like, conserved sitePROSITEPS00211ABC_TRANSPORTER_1coord: 157..171

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_88contigScGOVlb_88:1539555..1540357 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6612.t1Gvermi6612.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_88 1539555..1540357 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6612.t1 ID=Gvermi6612.t1|Name=Gvermi6612.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=236bp
MLHVRELRKTYGARDAPALRDLSLHLAPAEIVFLVGPSGAGKTTALRCIA
NLDPFDAGAVTVDGRSPRQTGFAQWRRRVMYVPQHRVALPGTPAALFERA
LALAAHAPPADPPRDRDRDRDRDRDRDPAARLERFVDVCRSMGLSRANVC
TQQWSELSGGQAQRATVSLCIALRPSVLLLDEPSSSCDLQSTLSMERAIK
RSNIAAVWVSHDTSQPHRVGGRIINMQPPPAAASH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003593AAA+_ATPase
IPR003439ABC_transporter-like_ATP-bd
IPR027417P-loop_NTPase
IPR017871ABC_transporter-like_CS