Gvermi6496.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6496.t1
Unique NameGvermi6496.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length504
Homology
BLAST of Gvermi6496.t1 vs. uniprot
Match: A0A2V3IMM4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMM4_9FLOR)

HSP 1 Score: 310 bits (794), Expect = 9.700e-97
Identity = 213/493 (43.20%), Postives = 302/493 (61.26%), Query Frame = 0
Query:    1 MAPRQIYQDERALDKLLDNLLQTGEKENSGVSDRSVHVS--EGHLSASNISEKLAVANGLLQESKICSELPILEENDTNCKTVLDHALTAIVHLCRCCKANANLRSEAERSVLVANEEILNLQRLNEKKKEKVTRLETKIATMKKEADDSAKENKHIVSNLITECSELKTKCARSAYRVNHLSLEIKKHEREYTQLQQKVHSLMTNTKRLSIEPQIVAITTNNVSKSPCLSREKSHEREEKEFNELAGSAEDQCMNEVITENRSLRDLLRAVQEELDDLLVSNPSLLEDLKTPAK-LSEKKPRIVEGAEDTTSKSPGPSSSEGMSSTGELTP----SVAKVGESAAQSLKASPQRSTLDSDQKDMQDDDSPKQAHEQTAKNEETVDAS-DGESQTPSEQRRDLSSSKSDTNRRHNGLEENKASQVLDHEEKTKDFSNITEPEVGTPVTGSPERNGTILNNLTPALTSEQMNLPFDMIRESLEHSLDQKFELLR 485
            MAPRQ+Y+DE+AL  LLDNLLQTG+   SG    ++  S  E H++ + I +++A AN  L ESK+CS LP LE  D N + VL  ALTAIV L +CCKAN  LRSEAE SVL A+ EI  +++L+E  + K  RLE++  +++  A +S ++NK +V  L T+C++LKTKCA S YRVNHL+LE+KK EREYTQLQQ+VHSLMT++KRLSIEPQIVA   N++   P +SR +S ++EEK + E    +E+Q  +EV++EN++ RDLLRA+QEELDDLLVSN     + K P   L+E +       E+ ++KSP   S+ G  ++G  +     S++ + + +  S + SP    L +  +   +  S ++  E     +  + +S D E+  P      + S+    +      E   A  V + E   +D    T+P       G PE +  +L+ +TPALT EQMNLPF+MIR  LE SL QKF  LR
Sbjct:    1 MAPRQLYRDEKALGSLLDNLLQTGQSNGSGPLGVNITESHAEQHITGATIKDEIATANTFLAESKLCSLLPSLENGDNNIREVLASALTAIVRLSKCCKANMKLRSEAEHSVLTAHVEIDRVKKLHEAAQAKTNRLESQNVSLRNAASESDQKNKRVVRKLTTDCTDLKTKCANSNYRVNHLTLEVKKREREYTQLQQRVHSLMTHSKRLSIEPQIVATVANDIGNHP-ISRGRSLQKEEKAYEESTELSENQFRDEVMSENQAFRDLLRAIQEELDDLLVSNSGAFHEPKRPTSGLTELRQENETIKENGSAKSPN--STNGTDASGSPSENEEDSLSHLRQDSG-SRECSPNSHALTTFPEAKSELGSCEEKPEMEEATQPVLPSSNDRENAEPRPPPNAMQSTTESDSCDRTTYEI--AKSVTNVESDFEDCKKGTDP-------GHPESHEDVLSGVTPALTVEQMNLPFEMIRADLEQSLKQKFGRLR 480          
BLAST of Gvermi6496.t1 vs. uniprot
Match: R7QIY3_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QIY3_CHOCR)

HSP 1 Score: 164 bits (416), Expect = 1.110e-42
Identity = 111/319 (34.80%), Postives = 171/319 (53.61%), Query Frame = 0
Query:    1 MAPRQIYQDERALDKLLDNLLQTGEKENSGV----SDRSVHVSEGHLSASNISEKLAVANGLLQESKICSELPILEENDTNCKTVLDHALTAIVHLCRCCKANANLRSEAERSVLVANEEILNLQRLNEKKKEKVTRLETKIATMKKEADDSAKENKHIVSNLITECSELKTKCARSAYRVNHLSLEIKKHEREYTQLQQKVHSLMTNTKRLSIEPQIVAITTNNVSKSPCLSREKSHEREEKEFNELAGSAEDQCMNEVITENRSLRDLLRAVQEELDDLLVSNPSLLEDLKTPAKLSEKKPRIVEGAEDTTSKSPGP 315
            MAP+ +YQD+ +L   LD L+Q+   + + V    S  S    +  +    +   ++VAN LL+E   C  LP L EN+ N   VL  AL+ IV L RCCKAN +LR +AE        +   L R+    K+KVT+ E  +   K +  ++  +N+  V+ L  E + L+T+ A    ++N L+LE KK ER+YT LQQ+VH+LM+N+K+LSIEP I     N V K     R+ S   ++ E  E+    E      ++ EN S R LL ++Q E+DD++    S  + L  P + S +   + +G E+T++  P P
Sbjct:    1 MAPKDVYQDDGSLSNFLDGLIQSASDDRADVLGIESQTSPSEPKPPVEPERLVHGISVANDLLREGGQCPPLPFLTENNENIDRVLAAALSTIVRLSRCCKANVSLRVDAENRFQATQIDADRLSRVLHITKDKVTKREGDVVGAKNKLRETEAKNRRKVAQLTAESNSLRTRLAAGEGQINQLNLEAKKRERQYTHLQQRVHALMSNSKKLSIEPAITRGEGNKV-KHFHYQRKSSQTGDDSEL-EVDTDEEVNAAGVLLVENNSFRRLLHSIQVEMDDIIGGYTSAFKFLHPPNEQSSETSDVSDGEEETSNSVPAP 317          
The following BLAST results are available for this feature:
BLAST of Gvermi6496.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IMM4_9FLOR9.700e-9743.20Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QIY3_CHOCR1.110e-4234.80Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 177..204
NoneNo IPR availableCOILSCoilCoilcoord: 110..151
NoneNo IPR availableCOILSCoilCoilcoord: 253..280
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 290..305
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 353..429
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 290..447
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 430..447
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 309..330

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_88contigScGOVlb_88:1136257..1137768 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6496.t1Gvermi6496.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_88 1136257..1137768 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6496.t1 ID=Gvermi6496.t1|Name=Gvermi6496.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=504bp
MAPRQIYQDERALDKLLDNLLQTGEKENSGVSDRSVHVSEGHLSASNISE
KLAVANGLLQESKICSELPILEENDTNCKTVLDHALTAIVHLCRCCKANA
NLRSEAERSVLVANEEILNLQRLNEKKKEKVTRLETKIATMKKEADDSAK
ENKHIVSNLITECSELKTKCARSAYRVNHLSLEIKKHEREYTQLQQKVHS
LMTNTKRLSIEPQIVAITTNNVSKSPCLSREKSHEREEKEFNELAGSAED
QCMNEVITENRSLRDLLRAVQEELDDLLVSNPSLLEDLKTPAKLSEKKPR
IVEGAEDTTSKSPGPSSSEGMSSTGELTPSVAKVGESAAQSLKASPQRST
LDSDQKDMQDDDSPKQAHEQTAKNEETVDASDGESQTPSEQRRDLSSSKS
DTNRRHNGLEENKASQVLDHEEKTKDFSNITEPEVGTPVTGSPERNGTIL
NNLTPALTSEQMNLPFDMIRESLEHSLDQKFELLRLAFLQVTCRSPNAAK
ECL*
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