Gvermi6442.t1 (polypeptide) Gracilaria vermiculophylla HapMaleFtJ_2017 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGvermi6442.t1
Unique NameGvermi6442.t1
Typepolypeptide
OrganismGracilaria vermiculophylla HapMaleFtJ_2017 male (Gracilaria vermiculophylla HapMaleFtJ_2017 male)
Sequence length264
Homology
BLAST of Gvermi6442.t1 vs. uniprot
Match: A0A2V3IVX8_9FLOR (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVX8_9FLOR)

HSP 1 Score: 308 bits (789), Expect = 1.370e-103
Identity = 156/203 (76.85%), Postives = 182/203 (89.66%), Query Frame = 0
Query:   62 MSEPFSSSDENFTP-THELNQPPHLSQNPIFHDNLNPLQRAMMWPPVSPNQPPIWLRRMNSASETCVFKAGISAFAGGGLGVLFGLFFGGYSNAVDKAVETEGPASLKLRVGFKEAARSMRSYAKNFAMFGASFSAAECTVEKIRARHDIWNSVIGGCAAGAFMSASPSDKMTPRARAMQMAFGCASVAAFSAAIDYYMEYMD 263
            MS+  +SS + F   ++  ++ P LSQNPIF+D  NPLQ+ M+WPP++PNQPP+W+R +N+A+ETC+FKA +SA AGGGLGVLFGLFFGGYSNAVDKAVETEGPASLKLRVGFKEAARSMRSYAKNFAMFGASFS +ECTVEK+RARHDIWNSVIGGCAAGAFMS++PS+++  RARA QMAFGCASVAAFSAAIDYYMEYMD
Sbjct:    1 MSDNDASSAQRFDNFSNSADEAPPLSQNPIFNDR-NPLQQPMVWPPLNPNQPPLWIRTINNATETCIFKASMSAVAGGGLGVLFGLFFGGYSNAVDKAVETEGPASLKLRVGFKEAARSMRSYAKNFAMFGASFSVSECTVEKLRARHDIWNSVIGGCAAGAFMSSAPSERIPHRARAAQMAFGCASVAAFSAAIDYYMEYMD 202          
BLAST of Gvermi6442.t1 vs. uniprot
Match: A0A5J4Z0J1_PORPP (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z0J1_PORPP)

HSP 1 Score: 163 bits (413), Expect = 7.240e-47
Identity = 78/142 (54.93%), Postives = 104/142 (73.24%), Query Frame = 0
Query:  119 MNSASETCVFKAGISAFAGGGLGVLFGLFFGGYSNAVDKAVETEGPASLKLRVGFKEAARSMRSYAKNFAMFGASFSAAECTVEKIRARHDIWNSVIGGCAAGAFMSASPSDKMTPRARAMQMAFGCASVAAFSAAIDYYME 260
            +N+  E+C FKA +S  AGGG+G+ FGL FGGY+ AVD+AVE++G    + RVGFK A R+M SYAK+FA++GA FS++EC +E  RARHDIWNSV  GC  GA ++++P   +  +AR  QMA  CA +AAFS AID YM+
Sbjct:   42 LNAVGESCAFKALLSTVAGGGIGLFFGLLFGGYAQAVDEAVESKGTTVQRFRVGFKSAGRAMGSYAKSFAIWGAVFSSSECAIESYRARHDIWNSVAAGCVTGATLASAPKQSIGAKARIQQMAVACAGMAAFSGAIDLYMD 183          
BLAST of Gvermi6442.t1 vs. uniprot
Match: M1VHJ2_CYAM1 (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1VHJ2_CYAM1)

HSP 1 Score: 152 bits (384), Expect = 1.610e-42
Identity = 74/138 (53.62%), Postives = 100/138 (72.46%), Query Frame = 0
Query:  124 ETCVFKAGISAFAGGGLGVLFGLFFGGYSNAVDKAVETEGPASLKLRVGFKEAARSMRSYAKNFAMFGASFSAAECTVEKIRARHDIWNSVIGGCAAGAFMSASPSDKMTPRARAMQMAFGCASVAAFSAAIDYYMEY 261
            E+C FKA  +A AGGGLGV  GLF GG+S  +D+AVE + P   +LR   K  A  +R+Y+KNFA++GA+++ AEC+VEK RARHD+WNS+I GCA GA +++ P   M+ R R  QM+ GC  VAAFS AIDY++E+
Sbjct:   43 ESCAFKAVAAAIAGGGLGVALGLFIGGFSAELDRAVEAQSPWREQLRAYGKALAAQIRTYSKNFALWGATYTIAECSVEKYRARHDLWNSLIAGCATGAVLASQPRASMSARTRGQQMSVGCLGVAAFSCAIDYWLEH 180          
BLAST of Gvermi6442.t1 vs. uniprot
Match: A0A1X6NRT5_PORUM (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NRT5_PORUM)

HSP 1 Score: 147 bits (370), Expect = 4.060e-41
Identity = 74/125 (59.20%), Postives = 92/125 (73.60%), Query Frame = 0
Query:  137 GGGLGVLFGLFFGGYSNAVDKAVETEGPASLKLRVGFKEAARSMRSYAKNFAMFGASFSAAECTVEKIRARHDIWNSVIGGCAAGAFMSASPSDKMTP-RARAMQMAFGCASVAAFSAAIDYYME 260
            GGGLG+  GL FGGY++ VD+AVE +GP   KLRVGF  A  SM  Y+++FA  GA F+  +C VEK RARHD+WNS++GGCAAGA +S++P  +  P RARA  MA GCA  AAFS AIDY+ME
Sbjct:    2 GGGLGLFAGLLFGGYASGVDRAVEMKGPMRAKLRVGFAAAGTSMAEYSRSFARLGAVFALCDCAVEKARARHDLWNSLLGGCAAGAALSSAPRTRGVPARARAGNMALGCAGFAAFSTAIDYWME 126          
BLAST of Gvermi6442.t1 vs. uniprot
Match: A0A7J7IQZ2_9RHOD (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IQZ2_9RHOD)

HSP 1 Score: 148 bits (373), Expect = 7.200e-41
Identity = 70/138 (50.72%), Postives = 98/138 (71.01%), Query Frame = 0
Query:  124 ETCVFKAGISAFAGGGLGVLFGLFFGGYSNAVDKAVETEGPASLKLRVGFKEAARSMRSYAKNFAMFGASFSAAECTVEKIRARHDIWNSVIGGCAAGAFMSASPSDKMTPRARAMQMAFGCASVAAFSAAIDYYMEY 261
            E+C FKA  +A AGGGLGV  GLF GG+S  +D+ VE + P   +LR   +  A  +R+Y+KNFA++GA+++  EC+VEK RARHD+WNS+I GC  GA +++ P  +M+ R R  QM+ GC  VAAFS AIDY++E+
Sbjct:   43 ESCAFKAAAAAIAGGGLGVALGLFVGGFSTELDRTVEAQAPWRQQLRAYGRALAAQIRTYSKNFALWGATYTITECSVEKYRARHDLWNSLIAGCMTGAVLASQPRTQMSLRTRGQQMSVGCLGVAAFSCAIDYWLEH 180          
BLAST of Gvermi6442.t1 vs. uniprot
Match: R7QDQ1_CHOCR (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QDQ1_CHOCR)

HSP 1 Score: 125 bits (314), Expect = 2.610e-33
Identity = 60/84 (71.43%), Postives = 67/84 (79.76%), Query Frame = 0
Query:  180 MRSYAKNFAMFGASFSAAECTVEKIRARHDIWNSVIGGCAAGAFMSASPSDKMTPRARAMQMAFGCASVAAFSAAIDYYMEYMD 263
            M SYAK+FAMFG  FS AECTVEK+RARHDIWNS+IGGC  GA MS+ P   +  RARA QMA GC  +AAFSAAIDYYMEYM+
Sbjct:    1 MSSYAKSFAMFGLVFSGAECTVEKVRARHDIWNSIIGGCVTGAVMSSQPRQSIPHRARASQMAVGCGGMAAFSAAIDYYMEYME 84          
BLAST of Gvermi6442.t1 vs. uniprot
Match: M2XRN2_GALSU (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XRN2_GALSU)

HSP 1 Score: 107 bits (267), Expect = 3.120e-25
Identity = 55/145 (37.93%), Postives = 81/145 (55.86%), Query Frame = 0
Query:  119 MNSASETCVFKAGISAFAGGGLGVLFGLFFGGYSNAVDKAVETEGPASLKLRVGFKEAARSMRSYAKNFAMFGASFSAAECTVEKIRARHDIWNSVIGGCAAGAFMSASPSDKMTPRARAMQMAFGCASVAAFSAAIDYYMEYMD 263
            +  A E+C+FK+ +S  A                   D AVET+G A  KL  G + A  +    AK FA++G  +S  EC +EK RA+HD+WNS++ GC  G  +++ P   M  +ARA QM+ GC  VA FS A+DY++E+ +
Sbjct:   26 IEKAMESCLFKSMMSGVAXXXXXXXXXXXXXXXXXXXDTAVETQGTAKQKLLAGGRVAKNACVRQAKTFALWGTVYSGTECAIEKYRAKHDLWNSLVAGCITGGVLTSQPKIPMGAKARATQMSVGCGGVAMFSLALDYFLEHRE 170          
BLAST of Gvermi6442.t1 vs. uniprot
Match: A0A0G4IP81_PLABS (Mitochondrial import inner membrane translocase subunit TIM22 n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IP81_PLABS)

HSP 1 Score: 105 bits (261), Expect = 1.740e-24
Identity = 60/141 (42.55%), Postives = 84/141 (59.57%), Query Frame = 0
Query:  121 SASETCVFKAGISAFAGGGLGVLFGLFFGGYSNAVDKAVETEGPAS-LKLRVGFKEAARSMRSYAKNFAMFGASFSAAECTVEKIRARHDIWNSVIGGCAAGAFMSASPSDKMTPRARAMQMAFGCASVAAFSAAIDYYME 260
            +A E C  K   S  AGG +G++FGL  G + +++  + E +   S  K+R+  K+     +S+ KNFA+ G  +SA EC +EK RA+HD++N  + GC  GA +SA    K  P+A    M FGCA  AAFSAAID YME
Sbjct:   25 NAMENCAVKGVFSGLAGGAMGLVFGLMMGSFDHSMSMSEEYQAADSRTKIRMTMKDMVAKSKSWGKNFAVVGLIYSATECFIEKQRAKHDLYNVAMAGCVTGAALSA----KSGPQA----MLFGCAGFAAFSAAIDAYME 157          
BLAST of Gvermi6442.t1 vs. uniprot
Match: A0A087SML1_AUXPR (Mitochondrial import inner membrane translocase subunit tim-22 n=2 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A087SML1_AUXPR)

HSP 1 Score: 94.7 bits (234), Expect = 3.450e-20
Identity = 59/147 (40.14%), Postives = 81/147 (55.10%), Query Frame = 0
Query:  122 ASETCVFKAGISAFAGGGLGVLFGLFFGGYSNA---VDKAVETEGPASLKLRVGFKEAARSMRS----YAKNFAMFGASFSAAECTVEKIRARHDIWNSVIGGCAAGAFMSASPSDKMTPRARAMQMAFGCASVAAFSAAIDYYMEY 261
            A   C  +  +SA  G GLG +FGLF G    A   +D  + TE      +R   K+  R+  S    YAK F+  GA F+ +EC +EK+RA+HD +NSV  GC AGA ++ S   K         MA GC + AAFSAAID++M++
Sbjct:   51 AMNNCAVRTVLSAVMGAGLGAMFGLFMGTMDGAGLGIDGRLATENQKQ-NVRQIMKDMVRNTSSKSWSYAKGFSAMGALFAGSECVIEKMRAKHDRYNSVYAGCTAGAVLAHSGGPKA--------MALGCGTFAAFSAAIDHFMDH 188          
BLAST of Gvermi6442.t1 vs. uniprot
Match: A0A2T9ZHV5_9FUNG (Mitochondrial import inner membrane translocase subunit TIM22 (Fragment) n=1 Tax=Smittium megazygosporum TaxID=133381 RepID=A0A2T9ZHV5_9FUNG)

HSP 1 Score: 93.6 bits (231), Expect = 3.460e-20
Identity = 54/138 (39.13%), Postives = 78/138 (56.52%), Query Frame = 0
Query:  125 TCVFKAGISAFAGGGLGVLFGLFFGGYSNAVD--KAVETEGPASLKLRVGFKEAARSMRSYAKNFAMFGASFSAAECTVEKIRARHDIWNSVIGGCAAGAFMSASPSDKMTPRARAMQMAFGCASVAAFSAAIDYYME 260
            +C+FK G+S  AG GLG +FGL      +++D    V TE     +++   ++  +   S AK FA+  A +S +EC +E  RAR+DI+NSV  GC  GA ++     K         M FGCA  AAFSAAI+YY++
Sbjct:   23 SCLFKTGLSGVAGLGLGAIFGLIM----SSIDFTNPVNTEASTKQQIKETLRDMGQKSYSTAKGFALVAAIYSGSECIIESYRARNDIYNSVSAGCVTGAALATKTGPK--------GMLFGCAGFAAFSAAIEYYLQ 148          
The following BLAST results are available for this feature:
BLAST of Gvermi6442.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IVX8_9FLOR1.370e-10376.85Mitochondrial import inner membrane translocase su... [more]
A0A5J4Z0J1_PORPP7.240e-4754.93Mitochondrial import inner membrane translocase su... [more]
M1VHJ2_CYAM11.610e-4253.62Mitochondrial import inner membrane translocase su... [more]
A0A1X6NRT5_PORUM4.060e-4159.20Mitochondrial import inner membrane translocase su... [more]
A0A7J7IQZ2_9RHOD7.200e-4150.72Mitochondrial import inner membrane translocase su... [more]
R7QDQ1_CHOCR2.610e-3371.43Mitochondrial import inner membrane translocase su... [more]
M2XRN2_GALSU3.120e-2537.93Mitochondrial import inner membrane translocase su... [more]
A0A0G4IP81_PLABS1.740e-2442.55Mitochondrial import inner membrane translocase su... [more]
A0A087SML1_AUXPR3.450e-2040.14Mitochondrial import inner membrane translocase su... [more]
A0A2T9ZHV5_9FUNG3.460e-2039.13Mitochondrial import inner membrane translocase su... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF02466Tim17coord: 126..252
e-value: 2.9E-25
score: 88.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 66..86
NoneNo IPR availablePANTHERPTHR14110:SF0MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM22coord: 118..261
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 126..148
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 227..237
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 149..209
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 238..259
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 210..226
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 260..263
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..125
NoneNo IPR availableTMHMMTMhelixcoord: 238..255
NoneNo IPR availableTMHMMTMhelixcoord: 126..148
IPR039175Mitochondrial import inner membrane translocase subunit TIM22PANTHERPTHR14110MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM22coord: 118..261

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ScGOVlb_88contigScGOVlb_88:771293..772084 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria vermiculophylla HapMaleFtJ_2017 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gvermi6442.t1Gvermi6442.t1Gracilaria vermiculophylla HapMaleFtJ_2017 malemRNAScGOVlb_88 771293..772084 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gvermi6442.t1 ID=Gvermi6442.t1|Name=Gvermi6442.t1|organism=Gracilaria vermiculophylla HapMaleFtJ_2017 male|type=polypeptide|length=264bp
LVQGIIPIRRRVHPNRPRSIADDGDARRFGIDFNAQSPRRQTFHSLSSQC
LSAWKELSKSIMSEPFSSSDENFTPTHELNQPPHLSQNPIFHDNLNPLQR
AMMWPPVSPNQPPIWLRRMNSASETCVFKAGISAFAGGGLGVLFGLFFGG
YSNAVDKAVETEGPASLKLRVGFKEAARSMRSYAKNFAMFGASFSAAECT
VEKIRARHDIWNSVIGGCAAGAFMSASPSDKMTPRARAMQMAFGCASVAA
FSAAIDYYMEYMD*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039175TIM22